RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 GNAT1P11488 350 aa13.69□□□□□ -0.22
SYNE4-206ENST00000503121 CKBP12277 381 aa13.69□□□□□ -0.22
SYNE4-206ENST00000503121 ACTN1P12814 892 aa13.69□□□□□ -0.22
SYNE4-206ENST00000503121 SELPP16109 830 aa13.69□□□□□ -0.22
SYNE4-206ENST00000503121 HIC1Q14526 733 aa13.69□□□□□ -0.22
SYNE4-206ENST00000503121 RASIP1Q5U651 963 aa13.69□□□□□ -0.22
SYNE4-206ENST00000503121 FAM109BQ6ICB4 259 aaPredicted RBP13.69□□□□□ -0.22
SYNE4-206ENST00000503121 LRRC8DQ7L1W4 858 aa13.69□□□□□ -0.22
SYNE4-206ENST00000503121 NIPA1Q7RTP0 329 aa13.69□□□□□ -0.22
SYNE4-206ENST00000503121 DHX38Q92620 1227 aaKnown RBP13.69□□□□□ -0.22
SYNE4-206ENST00000503121 AZI2Q9H6S1 392 aa13.69□□□□□ -0.22
SYNE4-206ENST00000503121 SETD4Q9NVD3 440 aa13.69□□□□□ -0.22
SYNE4-206ENST00000503121 MTMR10Q9NXD2 777 aa13.69□□□□□ -0.22
SYNE4-206ENST00000503121 CXXC1Q9P0U4 656 aaPredicted RBP13.69□□□□□ -0.22
SYNE4-206ENST00000503121 NFASCO94856 1347 aa13.68□□□□□ -0.22
SYNE4-206ENST00000503121 DOCK5Q9H7D0 1870 aa13.68□□□□□ -0.22
SYNE4-206ENST00000503121 GRXCR1A8MXD5 290 aa13.68□□□□□ -0.22
SYNE4-206ENST00000503121 DDX39AO00148 427 aaKnown RBP13.68□□□□□ -0.22
SYNE4-206ENST00000503121 TREHO43280 583 aa13.68□□□□□ -0.22
SYNE4-206ENST00000503121 MARK3P27448 753 aa13.68□□□□□ -0.22
SYNE4-206ENST00000503121 THPOP40225 353 aa13.68□□□□□ -0.22
SYNE4-206ENST00000503121 ITGB3BPQ13352 177 aaPredicted RBP13.68□□□□□ -0.22
SYNE4-206ENST00000503121 SERINC5Q86VE9 423 aa13.68□□□□□ -0.22
SYNE4-206ENST00000503121 IL17RAQ96F46 866 aa13.68□□□□□ -0.22
SYNE4-206ENST00000503121 AIFM3Q96NN9 605 aa13.68□□□□□ -0.22
SYNE4-206ENST00000503121 UIMC1Q96RL1 719 aa13.68□□□□□ -0.22
SYNE4-206ENST00000503121 SMARCAD1Q9H4L7 1026 aa13.68□□□□□ -0.22
SYNE4-206ENST00000503121 ERAP1Q9NZ08 941 aa13.68□□□□□ -0.22
SYNE4-206ENST00000503121 PCDHA4Q9UN74 947 aa13.68□□□□□ -0.22
SYNE4-206ENST00000503121 SLC4A7Q9Y6M7 1214 aa13.68□□□□□ -0.22
SYNE4-206ENST00000503121 PARNO95453 639 aaKnown RBP13.67□□□□□ -0.22
SYNE4-206ENST00000503121 XBP1P17861 261 aa13.67□□□□□ -0.22
SYNE4-206ENST00000503121 ACTR2P61160 394 aa13.67□□□□□ -0.22
SYNE4-206ENST00000503121 RBL2Q08999 1139 aa13.67□□□□□ -0.22
SYNE4-206ENST00000503121 PRR16Q569H4 304 aa13.67□□□□□ -0.22
SYNE4-206ENST00000503121 ZNF618Q5T7W0 954 aa13.67□□□□□ -0.22
SYNE4-206ENST00000503121 NECAB1Q8N987 351 aa13.67□□□□□ -0.22
SYNE4-206ENST00000503121 CRYGNQ8WXF5 182 aa13.67□□□□□ -0.22
SYNE4-206ENST00000503121 WNT8BQ93098 351 aa13.67□□□□□ -0.22
SYNE4-206ENST00000503121 VWCEQ96DN2 955 aa13.67□□□□□ -0.22
SYNE4-206ENST00000503121 ZNF577Q9BSK1 485 aa13.67□□□□□ -0.22
SYNE4-206ENST00000503121 SEMA6BQ9H3T3 888 aa13.67□□□□□ -0.22
SYNE4-206ENST00000503121 TRIP12Q14669 1992 aaPredicted RBP13.67□□□□□ -0.22
SYNE4-206ENST00000503121 NRCAMQ92823 1304 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 IGLV3-22A0A075B6J6 115 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 IPO5O00410 1097 aaKnown RBP13.66□□□□□ -0.22
SYNE4-206ENST00000503121 DTNBO60941 627 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 DNAJB2P25686 324 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 HOXC8P31273 242 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 STAT5BP51692 787 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 SETQ01105 290 aaPredicted RBP13.66□□□□□ -0.22
SYNE4-206ENST00000503121 PPFIA1Q13136 1202 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 ME3Q16798 604 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 TRIM71Q2Q1W2 868 aaKnown RBP13.66□□□□□ -0.22
SYNE4-206ENST00000503121 GALNT17Q6IS24 598 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 BLIDQ8IZY5 108 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 LMBR1Q8WVP7 490 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 TIFAQ96CG3 184 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 C22orf23Q9BZE7 217 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 TCEAL9Q9UHQ7 104 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 MSRAQ9UJ68 235 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 KCNJ14Q9UNX9 436 aa13.66□□□□□ -0.22
SYNE4-206ENST00000503121 LAMA2P24043 3122 aaKnown RBP13.66□□□□□ -0.22
SYNE4-206ENST00000503121 EMSYQ7Z589 1322 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 RSPH10B2B2RC85 870 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 BACH1O14867 736 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 LGR5O75473 907 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 RSPH10BP0C881 870 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 ATP2A2P16615 1042 aaKnown RBP13.65□□□□□ -0.22
SYNE4-206ENST00000503121 CIITAP33076 1130 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 PBX2P40425 430 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 USP11P51784 963 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 IGBP1P78318 339 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 C8orf34Q49A92 452 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 FAM177A1Q8N128 213 aaPredicted RBP13.65□□□□□ -0.22
SYNE4-206ENST00000503121 TBCKQ8TEA7 893 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 WASF1Q92558 559 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 TNPO1Q92973 898 aaKnown RBP13.65□□□□□ -0.22
SYNE4-206ENST00000503121 PCYT2Q99447 389 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 PBX4Q9BYU1 374 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 TTYH1Q9H313 450 aaPredicted RBP13.65□□□□□ -0.22
SYNE4-206ENST00000503121 TBC1D22BQ9NU19 505 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 ORC3Q9UBD5 711 aaPredicted RBP13.65□□□□□ -0.22
SYNE4-206ENST00000503121 TRPC6Q9Y210 931 aa13.65□□□□□ -0.22
SYNE4-206ENST00000503121 STK36Q9NRP7 1315 aa13.64□□□□□ -0.23
SYNE4-206ENST00000503121 SCN5AQ14524 2016 aa13.64□□□□□ -0.23
SYNE4-206ENST00000503121 DHX15O43143 795 aaKnown RBP13.64□□□□□ -0.23
SYNE4-206ENST00000503121 NBNO60934 754 aa13.64□□□□□ -0.23
SYNE4-206ENST00000503121 LARGE1O95461 756 aa13.64□□□□□ -0.23
SYNE4-206ENST00000503121 CTDNEP1O95476 244 aa13.64□□□□□ -0.23
SYNE4-206ENST00000503121 CCNE2O96020 404 aa13.64□□□□□ -0.23
SYNE4-206ENST00000503121 CTSHP09668 335 aa13.64□□□□□ -0.23
SYNE4-206ENST00000503121 GPNMBQ14956 572 aa13.64□□□□□ -0.23
SYNE4-206ENST00000503121 RAB30Q15771 203 aa13.64□□□□□ -0.23
SYNE4-206ENST00000503121 GRIK4Q16099 956 aa13.64□□□□□ -0.23
SYNE4-206ENST00000503121 FAM160B1Q5W0V3 765 aa13.64□□□□□ -0.23
SYNE4-206ENST00000503121 MIS18BP1Q6P0N0 1132 aa13.64□□□□□ -0.23
SYNE4-206ENST00000503121 CNKSR3Q6P9H4 555 aa13.64□□□□□ -0.23
SYNE4-206ENST00000503121 PLPPR4Q7Z2D5 763 aa13.64□□□□□ -0.23
SYNE4-206ENST00000503121 DAGLBQ8NCG7 672 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms