RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 TMEM87BQ96K49 555 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 MAP3K14Q99558 947 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 RAD9AQ99638 391 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 C16orf70Q9BSU1 422 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 SPZ1Q9BXG8 430 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 USP26Q9BXU7 913 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 ANO2Q9NQ90 1003 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 MTUS1Q9ULD2 1270 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 MTCH2Q9Y6C9 303 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 PRRC2BQ5JSZ5 2229 aaKnown RBP12.35□□□□□ -0.43
SNCA-207ENST00000502987 LCHNA4D1U4 455 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 EPOPA6NHQ4 379 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 SPATA31C2B4DYI2 1134 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 SLC27A2O14975 620 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 LGR5O75473 907 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 ARHGEF15O94989 841 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 PLEKHA8P1O95397 391 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 CXCL10P02778 98 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 CALM1P0DP23 149 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 CALM2P0DP24 149 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 CALM3P0DP25 149 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 HOXD8P13378 290 aaPredicted RBP12.34□□□□□ -0.43
SNCA-207ENST00000502987 TFF2Q03403 129 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 RBL2Q08999 1139 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 TRIM71Q2Q1W2 868 aaKnown RBP12.34□□□□□ -0.43
SNCA-207ENST00000502987 KRT40Q6A162 431 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 METTL7BQ6UX53 244 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 WNT8BQ93098 351 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 UHRF1Q96T88 793 aaPredicted RBP12.34□□□□□ -0.43
SNCA-207ENST00000502987 LRRC2Q9BYS8 371 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 RNPEPQ9H4A4 650 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 PSTPIP2Q9H939 334 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 ZNF215Q9UL58 517 aaPredicted RBP12.34□□□□□ -0.43
SNCA-207ENST00000502987 SLC12A7Q9Y666 1083 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 EMSYQ7Z589 1322 aa12.34□□□□□ -0.43
SNCA-207ENST00000502987 hCG_1642624A0A1W2PR95 340 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 SH2B2O14492 632 aaPredicted RBP12.33□□□□□ -0.44
SNCA-207ENST00000502987 TREHO43280 583 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 GJB5O95377 273 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 AMHP03971 560 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 CTSHP09668 335 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 SMARCA1P28370 1054 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 ICAM3P32942 547 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 GRB10Q13322 594 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 HIC1Q14526 733 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 TCTN1Q2MV58 587 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 PCNX4Q63HM2 1172 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 CREB3L3Q68CJ9 461 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 SERINC5Q86VE9 423 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 MYOCDQ8IZQ8 938 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 ZNF687Q8N1G0 1237 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 SRBD1Q8N5C6 995 aaKnown RBP12.33□□□□□ -0.44
SNCA-207ENST00000502987 GIMAP8Q8ND71 665 aaPredicted RBP12.33□□□□□ -0.44
SNCA-207ENST00000502987 DBF4BQ8NFT6 615 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 INPP4AQ96PE3 977 aaPredicted RBP12.33□□□□□ -0.44
SNCA-207ENST00000502987 GPR20Q99678 358 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 ESYT1Q9BSJ8 1104 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 MTA3Q9BTC8 594 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 LSG1Q9H089 658 aaKnown RBP12.33□□□□□ -0.44
SNCA-207ENST00000502987 SETD4Q9NVD3 440 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 TTC28Q96AY4 2481 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 XIRP2A4UGR9 3374 aa12.33□□□□□ -0.44
SNCA-207ENST00000502987 SPDYE3A6NKU9 549 aa12.32□□□□□ -0.44
SNCA-207ENST00000502987 RBAK-RBAKDNI3L0D1 243 aa12.32□□□□□ -0.44
SNCA-207ENST00000502987 MEIS2O14770 477 aa12.32□□□□□ -0.44
SNCA-207ENST00000502987 UPP2O95045 317 aa12.32□□□□□ -0.44
SNCA-207ENST00000502987 POU3F3P20264 500 aaPredicted RBP12.32□□□□□ -0.44
SNCA-207ENST00000502987 ARHGAP4P98171 946 aa12.32□□□□□ -0.44
SNCA-207ENST00000502987 RNF20Q5VTR2 975 aa12.32□□□□□ -0.44
SNCA-207ENST00000502987 XRRA1Q6P2D8 792 aa12.32□□□□□ -0.44
SNCA-207ENST00000502987 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNCA-207ENST00000502987 HEATR3Q7Z4Q2 680 aa12.32□□□□□ -0.44
SNCA-207ENST00000502987 SPRED2Q7Z698 418 aa12.32□□□□□ -0.44
SNCA-207ENST00000502987 TRIM50Q86XT4 487 aa12.32□□□□□ -0.44
SNCA-207ENST00000502987 SEPT8Q92599 483 aa12.32□□□□□ -0.44
SNCA-207ENST00000502987 KHSRPQ92945 711 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNCA-207ENST00000502987 TGS1Q96RS0 853 aaKnown RBP12.32□□□□□ -0.44
SNCA-207ENST00000502987 PKD2L1Q9P0L9 805 aa12.32□□□□□ -0.44
SNCA-207ENST00000502987 INSL6Q9Y581 213 aa12.32□□□□□ -0.44
SNCA-207ENST00000502987 FRMPD4Q14CM0 1322 aa12.32□□□□□ -0.44
SNCA-207ENST00000502987 MICAL3Q7RTP6 2002 aa12.32□□□□□ -0.44
SNCA-207ENST00000502987 PIK3CDO00329 1044 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 TCF7P36402 384 aaPredicted RBP12.31□□□□□ -0.44
SNCA-207ENST00000502987 LIFRP42702 1097 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 KCNQ1P51787 676 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 SEMA3FQ13275 785 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 MBTPS1Q14703 1052 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 UBE2SQ16763 222 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 TRAF7Q6Q0C0 670 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 MICU3Q86XE3 530 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 FANCBQ8NB91 859 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 GDPD5Q8WTR4 605 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 GLG1Q92896 1179 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 HLA-CQ95604 372 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 RNF166Q96A37 237 aaPredicted RBP12.31□□□□□ -0.44
SNCA-207ENST00000502987 CDHR1Q96JP9 859 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 SENP7Q9BQF6 1050 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 EHMT1Q9H9B1 1298 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 NAP1L2Q9ULW6 460 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms