RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 TRIM50Q86XT4 487 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 DIS3L2Q8IYB7 885 aaKnown RBP8.28□□□□□ -1.08
USP46-203ENST00000502443 FBXO18Q8NFZ0 1043 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 GLG1Q92896 1179 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 TNFRSF25Q93038 417 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 LENG9Q96B70 501 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 TBC1D22BQ9NU19 505 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 HDAC6Q9UBN7 1215 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 GTF2IRD1Q9UHL9 959 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 TCEAL9Q9UHQ7 104 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 TBX21Q9UL17 535 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 ZNF215Q9UL58 517 aaPredicted RBP8.28□□□□□ -1.08
USP46-203ENST00000502443 COLQQ9Y215 455 aaPredicted RBP8.28□□□□□ -1.08
USP46-203ENST00000502443 NOD1Q9Y239 953 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 KIF3AQ9Y496 699 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.28□□□□□ -1.08
USP46-203ENST00000502443 CYP3A7-CYP3A51PA0A087WV96 503 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 FAM205CA6NFA0 338 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 MSH4O15457 936 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 DHX15O43143 795 aaKnown RBP8.27□□□□□ -1.09
USP46-203ENST00000502443 CCNT1O60563 726 aaKnown RBP8.27□□□□□ -1.09
USP46-203ENST00000502443 CCNE2O96020 404 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 TIMP1P01033 207 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 CYP2C9P11712 490 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 CYP3A7P24462 503 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 ITGB8P26012 769 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 MARK3P27448 753 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 GJB2P29033 226 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 GNL2Q13823 731 aaKnown RBP8.27□□□□□ -1.09
USP46-203ENST00000502443 PTGISQ16647 500 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 Q4G0T1 1027 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 LRCH2Q5VUJ6 765 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 GDF6Q6KF10 455 aaPredicted RBP8.27□□□□□ -1.09
USP46-203ENST00000502443 MOXD1Q6UVY6 613 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 SESTD1Q86VW0 696 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 BADQ92934 168 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 GJA10Q969M2 543 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 PPP1R12CQ9BZL4 782 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 HIPK3Q9H422 1215 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 RNPEPQ9H4A4 650 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 SMARCAD1Q9H4L7 1026 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 AZI2Q9H6S1 392 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 ERAP1Q9NZ08 941 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 DDX25Q9UHL0 483 aaKnown RBP8.27□□□□□ -1.09
USP46-203ENST00000502443 SMC3Q9UQE7 1217 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 SAMM50Q9Y512 469 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 KAT6AQ92794 2004 aa8.27□□□□□ -1.09
USP46-203ENST00000502443 LTBP2Q14767 1821 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 TRIP12Q14669 1992 aaPredicted RBP8.26□□□□□ -1.09
USP46-203ENST00000502443 BACH1O14867 736 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 SLC37A4O43826 429 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 GAS7O60861 476 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 ATG7O95352 703 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 SMIM10L2AP0DMW4 78 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 SMIM10L2BP0DMW5 78 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 GCFC2P16383 781 aaKnown RBP8.26□□□□□ -1.09
USP46-203ENST00000502443 CYP2C18P33260 490 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 STAT5BP51692 787 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 ZNF200P98182 395 aaPredicted RBP8.26□□□□□ -1.09
USP46-203ENST00000502443 KRT76Q01546 638 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 PPP4R3AQ6IN85 833 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 ZNF746Q6NUN9 644 aaPredicted RBP8.26□□□□□ -1.09
USP46-203ENST00000502443 MIS18BP1Q6P0N0 1132 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 ABHD15Q6UXT9 468 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 SMAP1Q8IYB5 467 aaPredicted RBP8.26□□□□□ -1.09
USP46-203ENST00000502443 SLC5A5Q92911 643 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 MBOAT7Q96N66 472 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 PCYT2Q99447 389 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 RIT2Q99578 217 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 NAP1L4Q99733 375 aaKnown RBP8.26□□□□□ -1.09
USP46-203ENST00000502443 GDF15Q99988 308 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 NOC4LQ9BVI4 516 aaKnown RBP8.26□□□□□ -1.09
USP46-203ENST00000502443 TEKT3Q9BXF9 490 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 UBE2OQ9C0C9 1292 aaKnown RBP8.26□□□□□ -1.09
USP46-203ENST00000502443 FOXP1Q9H334 677 aaPredicted RBP8.26□□□□□ -1.09
USP46-203ENST00000502443 SETD4Q9NVD3 440 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 MYH9P35579 1960 aaKnown RBP8.26□□□□□ -1.09
USP46-203ENST00000502443 EMSYQ7Z589 1322 aa8.26□□□□□ -1.09
USP46-203ENST00000502443 C17orf102A2RUQ5 167 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 H3BQV1 296 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 K7ELQ4 463 aaPredicted RBP8.25□□□□□ -1.09
USP46-203ENST00000502443 CHMP2AO43633 222 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 MARCH6O60337 910 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 LGR5O75473 907 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 PSAPP07602 524 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 GNAT1P11488 350 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 ATP2B1P20020 1258 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 BMP8BP34820 402 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 CCL23P55773 120 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 FPGSQ05932 587 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 BFSP2Q13515 415 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 CUL4AQ13619 759 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 HIC1Q14526 733 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 FAM160B1Q5W0V3 765 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 MCTP1Q6DN14 999 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 MFSD5Q6N075 450 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 SWSAP1Q6NVH7 229 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 PLPPR4Q7Z2D5 763 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 NOSTRINQ8IVI9 506 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 CKAP2LQ8IYA6 745 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms