RNA–Protein interactions for RNA: ENST00000498793.5

SCMH1-217, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-217ENST00000498793 NFRKBQ6P4R8 1299 aa13.21□□□□□ -0.29
SCMH1-217ENST00000498793 KCNV1Q6PIU1 500 aa13.21□□□□□ -0.29
SCMH1-217ENST00000498793 BLIDQ8IZY5 108 aa13.21□□□□□ -0.29
SCMH1-217ENST00000498793 TBCKQ8TEA7 893 aa13.21□□□□□ -0.29
SCMH1-217ENST00000498793 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.21□□□□□ -0.29
SCMH1-217ENST00000498793 PHF20Q9BVI0 1012 aa13.21□□□□□ -0.29
SCMH1-217ENST00000498793 RNPEPQ9H4A4 650 aa13.21□□□□□ -0.29
SCMH1-217ENST00000498793 EHMT1Q9H9B1 1298 aa13.21□□□□□ -0.29
SCMH1-217ENST00000498793 GTF2IRD1Q9UHL9 959 aa13.21□□□□□ -0.29
SCMH1-217ENST00000498793 COL6A3P12111 3177 aa13.2□□□□□ -0.3
SCMH1-217ENST00000498793 GRXCR1A8MXD5 290 aa13.2□□□□□ -0.3
SCMH1-217ENST00000498793 KPNA6O60684 536 aa13.2□□□□□ -0.3
SCMH1-217ENST00000498793 ACTR2P61160 394 aa13.2□□□□□ -0.3
SCMH1-217ENST00000498793 TRIM71Q2Q1W2 868 aaKnown RBP13.2□□□□□ -0.3
SCMH1-217ENST00000498793 MFSD5Q6N075 450 aa13.2□□□□□ -0.3
SCMH1-217ENST00000498793 CPLX2Q6PUV4 134 aaKnown RBP13.2□□□□□ -0.3
SCMH1-217ENST00000498793 Q7L0L9 218 aa13.2□□□□□ -0.3
SCMH1-217ENST00000498793 DEFB128Q7Z7B8 93 aa13.2□□□□□ -0.3
SCMH1-217ENST00000498793 DAGLBQ8NCG7 672 aa13.2□□□□□ -0.3
SCMH1-217ENST00000498793 CCDC12Q8WUD4 166 aaPredicted RBP13.2□□□□□ -0.3
SCMH1-217ENST00000498793 TRAPPC12Q8WVT3 735 aa13.2□□□□□ -0.3
SCMH1-217ENST00000498793 TBC1D32Q96NH3 1257 aa13.2□□□□□ -0.3
SCMH1-217ENST00000498793 SENP7Q9BQF6 1050 aa13.2□□□□□ -0.3
SCMH1-217ENST00000498793 JPH1Q9HDC5 661 aaPredicted RBP13.2□□□□□ -0.3
SCMH1-217ENST00000498793 SH3GLB2Q9NR46 395 aa13.2□□□□□ -0.3
SCMH1-217ENST00000498793 SETD4Q9NVD3 440 aa13.2□□□□□ -0.3
SCMH1-217ENST00000498793 H3BRB1 525 aa13.19□□□□□ -0.3
SCMH1-217ENST00000498793 DHX15O43143 795 aaKnown RBP13.19□□□□□ -0.3
SCMH1-217ENST00000498793 TREHO43280 583 aa13.19□□□□□ -0.3
SCMH1-217ENST00000498793 SLC37A4O43826 429 aa13.19□□□□□ -0.3
SCMH1-217ENST00000498793 CYP3A4P08684 503 aa13.19□□□□□ -0.3
SCMH1-217ENST00000498793 GNA11P29992 359 aa13.19□□□□□ -0.3
SCMH1-217ENST00000498793 GPNMBQ14956 572 aa13.19□□□□□ -0.3
SCMH1-217ENST00000498793 TMEM240Q5SV17 173 aa13.19□□□□□ -0.3
SCMH1-217ENST00000498793 TRAF7Q6Q0C0 670 aa13.19□□□□□ -0.3
SCMH1-217ENST00000498793 RUFY4Q6ZNE9 571 aa13.19□□□□□ -0.3
SCMH1-217ENST00000498793 C7orf31Q8N865 590 aa13.19□□□□□ -0.3
SCMH1-217ENST00000498793 TUT1Q9H6E5 874 aaKnown RBP13.19□□□□□ -0.3
SCMH1-217ENST00000498793 CXXC1Q9P0U4 656 aaPredicted RBP13.19□□□□□ -0.3
SCMH1-217ENST00000498793 SLC9A2Q9UBY0 812 aa13.19□□□□□ -0.3
SCMH1-217ENST00000498793 LIMCH1Q9UPQ0 1083 aa13.19□□□□□ -0.3
SCMH1-217ENST00000498793 MSH4O15457 936 aa13.18□□□□□ -0.3
SCMH1-217ENST00000498793 PPFIA4O75335 1185 aa13.18□□□□□ -0.3
SCMH1-217ENST00000498793 CDKL5O76039 1030 aa13.18□□□□□ -0.3
SCMH1-217ENST00000498793 CTSHP09668 335 aa13.18□□□□□ -0.3
SCMH1-217ENST00000498793 MBTPS1Q14703 1052 aa13.18□□□□□ -0.3
SCMH1-217ENST00000498793 PIK3AP1Q6ZUJ8 805 aa13.18□□□□□ -0.3
SCMH1-217ENST00000498793 ZNF365Q70YC5 407 aa13.18□□□□□ -0.3
SCMH1-217ENST00000498793 TRMT1LQ7Z2T5 733 aaKnown RBP13.18□□□□□ -0.3
SCMH1-217ENST00000498793 SESTD1Q86VW0 696 aa13.18□□□□□ -0.3
SCMH1-217ENST00000498793 CCDC60Q8IWA6 550 aaPredicted RBP13.18□□□□□ -0.3
SCMH1-217ENST00000498793 LMBR1Q8WVP7 490 aa13.18□□□□□ -0.3
SCMH1-217ENST00000498793 TNFRSF25Q93038 417 aa13.18□□□□□ -0.3
SCMH1-217ENST00000498793 RNPC3Q96LT9 517 aaKnown RBP13.18□□□□□ -0.3
SCMH1-217ENST00000498793 GLT8D2Q9H1C3 349 aa13.18□□□□□ -0.3
SCMH1-217ENST00000498793 NOD1Q9Y239 953 aa13.18□□□□□ -0.3
SCMH1-217ENST00000498793 NFASCO94856 1347 aa13.17□□□□□ -0.3
SCMH1-217ENST00000498793 IPO5O00410 1097 aaKnown RBP13.17□□□□□ -0.3
SCMH1-217ENST00000498793 CHMP2AO43633 222 aa13.17□□□□□ -0.3
SCMH1-217ENST00000498793 HOXC8P31273 242 aa13.17□□□□□ -0.3
SCMH1-217ENST00000498793 IGBP1P78318 339 aa13.17□□□□□ -0.3
SCMH1-217ENST00000498793 UGCGQ16739 394 aa13.17□□□□□ -0.3
SCMH1-217ENST00000498793 KRT40Q6A162 431 aa13.17□□□□□ -0.3
SCMH1-217ENST00000498793 OTOP2Q7RTS6 562 aa13.17□□□□□ -0.3
SCMH1-217ENST00000498793 BICD2Q8TD16 824 aa13.17□□□□□ -0.3
SCMH1-217ENST00000498793 SEPT1Q8WYJ6 367 aa13.17□□□□□ -0.3
SCMH1-217ENST00000498793 SDF4Q9BRK5 362 aa13.17□□□□□ -0.3
SCMH1-217ENST00000498793 ZNF577Q9BSK1 485 aa13.17□□□□□ -0.3
SCMH1-217ENST00000498793 KATNAL1Q9BW62 490 aa13.17□□□□□ -0.3
SCMH1-217ENST00000498793 BACH2Q9BYV9 841 aa13.17□□□□□ -0.3
SCMH1-217ENST00000498793 REV3LO60673 3130 aa13.17□□□□□ -0.3
SCMH1-217ENST00000498793 PRUNE2Q8WUY3 3088 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 C17orf102A2RUQ5 167 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 BTBD18B2RXH4 712 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 LGR5O75473 907 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 CKBP12277 381 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 ATP4AP20648 1035 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 CIITAP33076 1130 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 PBX2P40425 430 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 PTPN11Q06124 597 aaPredicted RBP13.16□□□□□ -0.3
SCMH1-217ENST00000498793 PPIGQ13427 754 aaKnown RBP eCLIP13.16□□□□□ -0.38e-7■■■□□ 17.7
SCMH1-217ENST00000498793 PLCB4Q15147 1175 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 NONOQ15233 471 aaKnown RBP eCLIP13.16□□□□□ -0.3
SCMH1-217ENST00000498793 RABEP1Q15276 862 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 LETM2Q2VYF4 491 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 ZNF618Q5T7W0 954 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 NIPA1Q7RTP0 329 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 TMCO2Q7Z6W1 182 aaPredicted RBP13.16□□□□□ -0.3
SCMH1-217ENST00000498793 GLG1Q92896 1179 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 ATP6V0A1Q93050 837 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 CDHR1Q96JP9 859 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 FAM161BQ96MY7 647 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 UNC45AQ9H3U1 944 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 IL23AQ9NPF7 189 aa13.16□□□□□ -0.3
SCMH1-217ENST00000498793 EMSYQ7Z589 1322 aa13.15□□□□□ -0.3
SCMH1-217ENST00000498793 COL4A4P53420 1690 aaPredicted RBP13.15□□□□□ -0.3
SCMH1-217ENST00000498793 TMEM150BA6NC51 233 aa13.15□□□□□ -0.3
SCMH1-217ENST00000498793 KIF28PB7ZC32 967 aa13.15□□□□□ -0.3
SCMH1-217ENST00000498793 NBNO60934 754 aa13.15□□□□□ -0.3
SCMH1-217ENST00000498793 IQCF3P0C7M6 154 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms