RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 MAD2L2Q9UI95 211 aa16.14■□□□□ 0.17
CCDC58-207ENST00000498466 ADGRA3Q8IWK6 1321 aa16.14■□□□□ 0.17
CCDC58-207ENST00000498466 STXBP3O00186 592 aa16.13■□□□□ 0.17
CCDC58-207ENST00000498466 GHRP10912 638 aa16.13■□□□□ 0.17
CCDC58-207ENST00000498466 SMAD4Q13485 552 aaKnown RBP16.13■□□□□ 0.17
CCDC58-207ENST00000498466 RNF135Q8IUD6 432 aa16.13■□□□□ 0.17
CCDC58-207ENST00000498466 LMBR1Q8WVP7 490 aa16.13■□□□□ 0.17
CCDC58-207ENST00000498466 DIAPH3Q9NSV4 1193 aa16.13■□□□□ 0.17
CCDC58-207ENST00000498466 MYH6P13533 1939 aa16.13■□□□□ 0.17
CCDC58-207ENST00000498466 NLRC5Q86WI3 1866 aa16.12■□□□□ 0.17
CCDC58-207ENST00000498466 USP34Q70CQ2 3546 aa16.12■□□□□ 0.17
CCDC58-207ENST00000498466 PALM3A6NDB9 673 aaPredicted RBP16.12■□□□□ 0.17
CCDC58-207ENST00000498466 TBX10O75333 385 aa16.12■□□□□ 0.17
CCDC58-207ENST00000498466 STAM2O75886 525 aa16.12■□□□□ 0.17
CCDC58-207ENST00000498466 CHRNA1P02708 482 aa16.12■□□□□ 0.17
CCDC58-207ENST00000498466 LINC00271P0C7V0 271 aa16.12■□□□□ 0.17
CCDC58-207ENST00000498466 ICAM3P32942 547 aa16.12■□□□□ 0.17
CCDC58-207ENST00000498466 GTF2F1P35269 517 aaKnown RBP eCLIP16.12■□□□□ 0.17
CCDC58-207ENST00000498466 MRPS9P82933 396 aaKnown RBP16.12■□□□□ 0.17
CCDC58-207ENST00000498466 SP4Q02446 784 aa16.12■□□□□ 0.17
CCDC58-207ENST00000498466 HDAC1Q13547 482 aaPredicted RBP16.12■□□□□ 0.17
CCDC58-207ENST00000498466 BTG3Q14201 252 aaPredicted RBP16.12■□□□□ 0.17
CCDC58-207ENST00000498466 CLP1Q92989 425 aaKnown RBP16.12■□□□□ 0.17
CCDC58-207ENST00000498466 INPP4AQ96PE3 977 aaPredicted RBP16.12■□□□□ 0.17
CCDC58-207ENST00000498466 PIGSQ96S52 555 aa16.12■□□□□ 0.17
CCDC58-207ENST00000498466 DSCC1Q9BVC3 393 aa16.12■□□□□ 0.17
CCDC58-207ENST00000498466 RTEL1Q9NZ71 1219 aa16.12■□□□□ 0.17
CCDC58-207ENST00000498466 CD207Q9UJ71 328 aa16.12■□□□□ 0.17
CCDC58-207ENST00000498466 SUPT16HQ9Y5B9 1047 aaKnown RBP16.12■□□□□ 0.17
CCDC58-207ENST00000498466 LAMA4Q16363 1823 aa16.12■□□□□ 0.17
CCDC58-207ENST00000498466 RALGAPA2Q2PPJ7 1873 aa16.12■□□□□ 0.17
CCDC58-207ENST00000498466 SPATA31C2B4DYI2 1134 aa16.11■□□□□ 0.17
CCDC58-207ENST00000498466 LINC01565O15544 149 aa16.11■□□□□ 0.17
CCDC58-207ENST00000498466 FIBPO43427 364 aa16.11■□□□□ 0.17
CCDC58-207ENST00000498466 MMP1P03956 469 aa16.11■□□□□ 0.17
CCDC58-207ENST00000498466 NDUFV1P49821 464 aa16.11■□□□□ 0.17
CCDC58-207ENST00000498466 ADAM17P78536 824 aa16.11■□□□□ 0.17
CCDC58-207ENST00000498466 EDAQ92838 391 aa16.11■□□□□ 0.17
CCDC58-207ENST00000498466 RC3H2Q9HBD1 1191 aaKnown RBP16.11■□□□□ 0.17
CCDC58-207ENST00000498466 ALG13Q9NP73 1137 aaKnown RBP16.11■□□□□ 0.17
CCDC58-207ENST00000498466 TELO2Q9Y4R8 837 aa16.11■□□□□ 0.17
CCDC58-207ENST00000498466 NRCAMQ92823 1304 aa16.11■□□□□ 0.17
CCDC58-207ENST00000498466 ENPP3O14638 875 aa16.1■□□□□ 0.17
CCDC58-207ENST00000498466 SEMA3FQ13275 785 aa16.1■□□□□ 0.17
CCDC58-207ENST00000498466 LPIN1Q14693 890 aa16.1■□□□□ 0.17
CCDC58-207ENST00000498466 SEC23AQ15436 765 aa16.1■□□□□ 0.17
CCDC58-207ENST00000498466 TAF2Q6P1X5 1199 aa16.1■□□□□ 0.17
CCDC58-207ENST00000498466 RUFY4Q6ZNE9 571 aa16.1■□□□□ 0.17
CCDC58-207ENST00000498466 RSPH3Q86UC2 560 aa16.1■□□□□ 0.17
CCDC58-207ENST00000498466 PPP2R3CQ969Q6 453 aa16.1■□□□□ 0.17
CCDC58-207ENST00000498466 PLVAPQ9BX97 442 aa16.1■□□□□ 0.17
CCDC58-207ENST00000498466 RIOX1Q9H6W3 641 aa16.1■□□□□ 0.17
CCDC58-207ENST00000498466 EHMT1Q9H9B1 1298 aa16.1■□□□□ 0.17
CCDC58-207ENST00000498466 PNMA6FA0A0J9YX94 578 aa16.09■□□□□ 0.17
CCDC58-207ENST00000498466 HIP1O00291 1037 aa16.09■□□□□ 0.17
CCDC58-207ENST00000498466 MGAT3Q09327 533 aa16.09■□□□□ 0.17
CCDC58-207ENST00000498466 ADAM15Q13444 863 aa16.09■□□□□ 0.17
CCDC58-207ENST00000498466 GRM4Q14833 912 aa16.09■□□□□ 0.17
CCDC58-207ENST00000498466 SLC35G1Q2M3R5 365 aa16.09■□□□□ 0.17
CCDC58-207ENST00000498466 B4GALNT3Q6L9W6 998 aa16.09■□□□□ 0.17
CCDC58-207ENST00000498466 CYB5R4Q7L1T6 521 aa16.09■□□□□ 0.17
CCDC58-207ENST00000498466 ZNF689Q96CS4 500 aaPredicted RBP16.09■□□□□ 0.17
CCDC58-207ENST00000498466 PHOX2BQ99453 314 aa16.09■□□□□ 0.17
CCDC58-207ENST00000498466 PLAGL2Q9UPG8 496 aa16.09■□□□□ 0.17
CCDC58-207ENST00000498466 FRMPD4Q14CM0 1322 aa16.09■□□□□ 0.17
CCDC58-207ENST00000498466 TMEM221A6NGB7 291 aa16.08■□□□□ 0.16
CCDC58-207ENST00000498466 M0R296 226 aa16.08■□□□□ 0.16
CCDC58-207ENST00000498466 DGKIO75912 1065 aa16.08■□□□□ 0.16
CCDC58-207ENST00000498466 PPFIA1Q13136 1202 aa16.08■□□□□ 0.16
CCDC58-207ENST00000498466 BMP8AQ7Z5Y6 402 aa16.08■□□□□ 0.16
CCDC58-207ENST00000498466 PRSS33Q8NF86 280 aa16.08■□□□□ 0.16
CCDC58-207ENST00000498466 PIBF1Q8WXW3 757 aa16.08■□□□□ 0.16
CCDC58-207ENST00000498466 PBXIP1Q96AQ6 731 aa16.08■□□□□ 0.16
CCDC58-207ENST00000498466 SENP7Q9BQF6 1050 aa16.08■□□□□ 0.16
CCDC58-207ENST00000498466 CYTH3O43739 400 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 EYA4O95677 639 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 MARK3P27448 753 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 TCF7P36402 384 aaPredicted RBP16.07■□□□□ 0.16
CCDC58-207ENST00000498466 PTPN5P54829 565 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 RRP1P56182 461 aaKnown RBP16.07■□□□□ 0.16
CCDC58-207ENST00000498466 TRDNQ13061 729 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 CAMK1Q14012 370 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 FBXO47Q5MNV8 452 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 IER5LQ5T953 404 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 TSHZ1Q6ZSZ6 1077 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 TRIM67Q6ZTA4 783 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 NLRX1Q86UT6 975 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 SUGP1Q8IWZ8 645 aaKnown RBP16.07■□□□□ 0.16
CCDC58-207ENST00000498466 GIMAP8Q8ND71 665 aaPredicted RBP16.07■□□□□ 0.16
CCDC58-207ENST00000498466 SMARCC2Q8TAQ2 1214 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 DNAJB3Q8WWF6 145 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 P2RX5Q93086 422 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 MSLNLQ96KJ4 702 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 FOXD4L1Q9NU39 408 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 TUBE1Q9UJT0 475 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 CDY2AQ9Y6F7 541 aa16.07■□□□□ 0.16
CCDC58-207ENST00000498466 MRPL42Q9Y6G3 142 aaKnown RBP16.07■□□□□ 0.16
CCDC58-207ENST00000498466 ERICH2A1L162 156 aa16.06■□□□□ 0.16
CCDC58-207ENST00000498466 IFIT3O14879 490 aaKnown RBP16.06■□□□□ 0.16
CCDC58-207ENST00000498466 DNAJB1P25685 340 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms