RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 BCAS3Q9H6U6 928 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 PAK6Q9NQU5 681 aaPredicted RBP12.9□□□□□ -0.34
CTTN-208ENST00000498223 POLR3EQ9NVU0 708 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 TRIP12Q14669 1992 aaPredicted RBP12.9□□□□□ -0.34
CTTN-208ENST00000498223 ELP1O95163 1332 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 SYNRGQ9UMZ2 1314 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 VWA3AA6NCI4 1184 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 KBTBD13C9JR72 458 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 H0YGN5 161 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 BACH1O14867 736 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 YEATS4O95619 227 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 PRPHP41219 470 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 GJA9P57773 515 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 CHMP4BP1P59074 171 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 ACTR2P61160 394 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 ATP2C1P98194 919 aaPredicted RBP12.89□□□□□ -0.35
CTTN-208ENST00000498223 BEX3Q00994 111 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 SLC39A14Q15043 492 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 FSCN1Q16658 493 aaKnown RBP12.89□□□□□ -0.35
CTTN-208ENST00000498223 TPRNQ4KMQ1 711 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 UTP14CQ5TAP6 766 aaKnown RBP12.89□□□□□ -0.35
CTTN-208ENST00000498223 C4orf32Q8N8J7 132 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 SEPT1Q8WYJ6 367 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 VTI1AQ96AJ9 217 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 CHAMP1Q96JM3 812 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 SPATA32Q96LK8 384 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 HTATIP2Q9BUP3 242 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 UNC45AQ9H3U1 944 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 EVPLQ92817 2033 aa12.89□□□□□ -0.35
CTTN-208ENST00000498223 WDR64B1ANS9 1081 aa12.88□□□□□ -0.35
CTTN-208ENST00000498223 SPTLC2O15270 562 aa12.88□□□□□ -0.35
CTTN-208ENST00000498223 DHX15O43143 795 aaKnown RBP12.88□□□□□ -0.35
CTTN-208ENST00000498223 PSAPP07602 524 aa12.88□□□□□ -0.35
CTTN-208ENST00000498223 SFNP31947 248 aa12.88□□□□□ -0.35
CTTN-208ENST00000498223 NASPP49321 788 aaPredicted RBP12.88□□□□□ -0.35
CTTN-208ENST00000498223 JAK3P52333 1124 aa12.88□□□□□ -0.35
CTTN-208ENST00000498223 IRX5P78411 483 aaPredicted RBP12.88□□□□□ -0.35
CTTN-208ENST00000498223 PTPAQ15257 358 aa12.88□□□□□ -0.35
CTTN-208ENST00000498223 DGKDQ16760 1214 aa12.88□□□□□ -0.35
CTTN-208ENST00000498223 HSDL1Q3SXM5 330 aa12.88□□□□□ -0.35
CTTN-208ENST00000498223 ARL6IP4Q66PJ3 421 aaKnown RBP12.88□□□□□ -0.35
CTTN-208ENST00000498223 LHX8Q68G74 356 aa12.88□□□□□ -0.35
CTTN-208ENST00000498223 ZNF746Q6NUN9 644 aaPredicted RBP12.88□□□□□ -0.35
CTTN-208ENST00000498223 PCSK9Q8NBP7 692 aaKnown RBP12.88□□□□□ -0.35
CTTN-208ENST00000498223 PPTC7Q8NI37 304 aa12.88□□□□□ -0.35
CTTN-208ENST00000498223 ERMNQ8TAM6 284 aa12.88□□□□□ -0.35
CTTN-208ENST00000498223 DPF3Q92784 378 aa12.88□□□□□ -0.35
CTTN-208ENST00000498223 TNPO1Q92973 898 aaKnown RBP12.88□□□□□ -0.35
CTTN-208ENST00000498223 EMID1Q96A84 441 aaPredicted RBP12.88□□□□□ -0.35
CTTN-208ENST00000498223 SCAND2PQ9GZW5 306 aaPredicted RBP12.88□□□□□ -0.35
CTTN-208ENST00000498223 UPF3AQ9H1J1 476 aaKnown RBP12.88□□□□□ -0.35
CTTN-208ENST00000498223 AZI2Q9H6S1 392 aa12.88□□□□□ -0.35
CTTN-208ENST00000498223 DISC1Q9NRI5 854 aa12.88□□□□□ -0.35
CTTN-208ENST00000498223 LRWD1Q9UFC0 647 aa12.88□□□□□ -0.35
CTTN-208ENST00000498223 MYADML2A6NDP7 307 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 POTEMA6NI47 508 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 CCNE2O96020 404 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 MMP3P08254 477 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 TCF7P36402 384 aaPredicted RBP12.87□□□□□ -0.35
CTTN-208ENST00000498223 ME1P48163 572 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 PPP2R5CQ13362 524 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 LRRC41Q15345 812 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 FAM160B1Q5W0V3 765 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 CKAP2LQ8IYA6 745 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 SMAP1Q8IYB5 467 aaPredicted RBP12.87□□□□□ -0.35
CTTN-208ENST00000498223 KRI1Q8N9T8 703 aaKnown RBP12.87□□□□□ -0.35
CTTN-208ENST00000498223 LINC00301Q8NCQ3 95 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 RASSF8Q8NHQ8 419 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 KCNG4Q8TDN1 519 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 GLG1Q92896 1179 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 FERMT2Q96AC1 680 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 GPR20Q99678 358 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 CRISPLD2Q9H0B8 497 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 COLQQ9Y215 455 aaPredicted RBP12.87□□□□□ -0.35
CTTN-208ENST00000498223 TELO2Q9Y4R8 837 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 PCDHA10Q9Y5I2 948 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 MYH11P35749 1972 aa12.87□□□□□ -0.35
CTTN-208ENST00000498223 ARID2Q68CP9 1835 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 GSTTP1A0A1W2PQM5 241 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 GOLGA6L4A6NEF3 574 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 A6NJR5 290 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 KPNA6O60684 536 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 PPP6R2O75170 966 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 ADAMTS4O75173 837 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 PPFIA4O75335 1185 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 SUPT20HL2P0C7V6 817 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 FXR2P51116 673 aaKnown RBP eCLIP12.86□□□□□ -0.351e-6■■□□□ 13.2
CTTN-208ENST00000498223 EPHA7Q15375 998 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 ZRSR1Q15695 479 aaKnown RBP12.86□□□□□ -0.35
CTTN-208ENST00000498223 KCNA10Q16322 511 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 CSPP1Q1MSJ5 1256 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 KRT79Q5XKE5 535 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 SWSAP1Q6NVH7 229 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 TRMT1LQ7Z2T5 733 aaKnown RBP12.86□□□□□ -0.35
CTTN-208ENST00000498223 RDM1Q8NG50 284 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 LEO1Q8WVC0 666 aaPredicted RBP12.86□□□□□ -0.35
CTTN-208ENST00000498223 CLIC6Q96NY7 704 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 GDPD2Q9HCC8 539 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 ZNF302Q9NR11 478 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 GABBR1Q9UBS5 961 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms