RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 B9A039 149 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 GOLGA8RI6L899 631 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 FZD9O00144 591 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 BIN1O00499 593 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CDK2AP1O14519 115 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SOAT2O75908 522 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 RHOBTB1O94844 696 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 FUCA1P04066 466 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 COPB2P35606 906 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CABP4P57796 275 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 HMGN5P82970 282 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 PLP2Q04941 152 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ITKQ08881 620 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 AIMP1Q12904 312 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 NAE1Q13564 534 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 PEX6Q13608 980 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 PDK1Q15118 436 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 KIF4BQ2VIQ3 1234 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 UAP1L1Q3KQV9 507 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 TBC1D10BQ4KMP7 808 aaPredicted RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 CFAP58Q5T655 872 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 MIS18BP1Q6P0N0 1132 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 INTS5Q6P9B9 1019 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 WDR59Q6PJI9 974 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SLCO4C1Q6ZQN7 724 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CHMP1BQ7LBR1 199 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 OTOP2Q7RTS6 562 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 PNMA8AQ86V59 439 aaPredicted RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 AMIGO1Q86WK6 493 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SLC22A15Q8IZD6 547 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 DTWD1Q8N5C7 304 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 LSM14AQ8ND56 463 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 RGS22Q8NE09 1264 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 EDARADDQ8WWZ3 215 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 GPR101Q96P66 508 aaPredicted RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 ADNPQ9H2P0 1102 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 GPR160Q9UJ42 338 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 DNM3Q9UQ16 869 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 TRAF3IP3Q9Y228 551 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 RPH3AQ9Y2J0 694 aaPredicted RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 PPME1Q9Y570 386 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ATP7BP35670 1465 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CARMIL1Q5VZK9 1371 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 UNC119BA6NIH7 251 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 DRGXA6NNA5 263 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 NFATC1O95644 943 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SERPINA3P01011 423 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 PDCP20941 246 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ADH6P28332 368 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 EPHA2P29317 976 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 MCM5P33992 734 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SELENOPP49908 381 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 LIMK1P53667 647 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ATP11AP98196 1134 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 IFT88Q13099 833 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CUL4BQ13620 913 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 KCNC3Q14003 757 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SLC10A1Q14973 349 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ARL13AQ5H913 290 aaPredicted RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 UBXN11Q5T124 520 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ATXN7L2Q5T6C5 722 aaPredicted RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 TTC39BQ5VTQ0 682 aaPredicted RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 EFCAB2Q5VUJ9 269 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CAPRIN2Q6IMN6 1127 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 SESTD1Q86VW0 696 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 HPS6Q86YV9 775 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 TMEM192Q8IY95 271 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 KCTD17Q8N5Z5 321 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SEC14L1Q92503 715 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 DPF2Q92785 391 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CNOT6LQ96LI5 555 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 MNTQ99583 582 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 PIGUQ9H490 435 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ESRP2Q9H6T0 727 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 CYP4F11Q9HBI6 524 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 APMAPQ9HDC9 416 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 PCDH12Q9NPG4 1184 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CTTNBP2NLQ9P2B4 639 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 MRPS28Q9Y2Q9 187 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 LUC7L2Q9Y383 392 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 SLCO1B1Q9Y6L6 691 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 OVOS2A0A0J9YW53 1432 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 OVOS2Q6IE36 1432 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 GOLGA6L7A0A1B0GV03 622 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CARNS1A5YM72 827 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SNAP91O60641 907 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 TNFP01375 233 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 KLK2P20151 261 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SOX18P35713 384 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 GRSF1Q12849 480 aaKnown RBP eCLIP1.64□□□□□ -2.15
XRN1-214ENST00000498077 PLS1Q14651 629 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ZNF827Q17R98 1081 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 PNLIPRP3Q17RR3 467 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 GJC2Q5T442 439 aaPredicted RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 UTP14CQ5TAP6 766 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 Q6ZVU0 165 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 FERMT3Q86UX7 667 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 VSTM4Q8IW00 320 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 DDIASQ8IXT1 998 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CAMKK1Q8N5S9 505 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms