RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 ARMC5Q96C12 935 aa15.28■□□□□ 0.04
CPNE1-227ENST00000498056 RNF208Q9H0X6 261 aa15.28■□□□□ 0.04
CPNE1-227ENST00000498056 TELO2Q9Y4R8 837 aa15.28■□□□□ 0.04
CPNE1-227ENST00000498056 TRIP12Q14669 1992 aaPredicted RBP15.27■□□□□ 0.04
CPNE1-227ENST00000498056 KIAA0100Q14667 2235 aaKnown RBP15.27■□□□□ 0.04
CPNE1-227ENST00000498056 MYADML2A6NDP7 307 aa15.27■□□□□ 0.04
CPNE1-227ENST00000498056 PPP6R2O75170 966 aa15.27■□□□□ 0.04
CPNE1-227ENST00000498056 PGK1P00558 417 aa15.27■□□□□ 0.04
CPNE1-227ENST00000498056 MMP3P08254 477 aa15.27■□□□□ 0.04
CPNE1-227ENST00000498056 ACTR2P61160 394 aa15.27■□□□□ 0.04
CPNE1-227ENST00000498056 BEX3Q00994 111 aa15.27■□□□□ 0.04
CPNE1-227ENST00000498056 SPIRE1Q08AE8 756 aa15.27■□□□□ 0.04
CPNE1-227ENST00000498056 LAMC2Q13753 1193 aa15.27■□□□□ 0.04
CPNE1-227ENST00000498056 IL17AQ16552 155 aa15.27■□□□□ 0.04
CPNE1-227ENST00000498056 CSPP1Q1MSJ5 1256 aa15.27■□□□□ 0.04
CPNE1-227ENST00000498056 HSDL1Q3SXM5 330 aa15.27■□□□□ 0.04
CPNE1-227ENST00000498056 PPTC7Q8NI37 304 aa15.27■□□□□ 0.04
CPNE1-227ENST00000498056 CLIC6Q96NY7 704 aa15.27■□□□□ 0.04
CPNE1-227ENST00000498056 SPC25Q9HBM1 224 aa15.27■□□□□ 0.04
CPNE1-227ENST00000498056 LRWD1Q9UFC0 647 aa15.27■□□□□ 0.04
CPNE1-227ENST00000498056 EVPLQ92817 2033 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 PP2D1A8MPX8 630 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 EML1O00423 815 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 BACH1O14867 736 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 ZNF286BP0CG31 522 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 SFNP31947 248 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 TCF7P36402 384 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-227ENST00000498056 CPT1AP50416 773 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 IRX5P78411 483 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-227ENST00000498056 CYP4A11Q02928 519 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 FSCN1Q16658 493 aaKnown RBP15.26■□□□□ 0.03
CPNE1-227ENST00000498056 BRDTQ58F21 947 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-227ENST00000498056 UTP14CQ5TAP6 766 aaKnown RBP15.26■□□□□ 0.03
CPNE1-227ENST00000498056 HAUS3Q68CZ6 603 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 TRIM50Q86XT4 487 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 SMAP1Q8IYB5 467 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-227ENST00000498056 RASSF8Q8NHQ8 419 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 ERMNQ8TAM6 284 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 SNX29Q8TEQ0 813 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 EMID1Q96A84 441 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-227ENST00000498056 DEFB118Q96PH6 123 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 GPR20Q99678 358 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 CSRNP2Q9H175 543 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 PAK6Q9NQU5 681 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-227ENST00000498056 DISC1Q9NRI5 854 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 SRPRBQ9Y5M8 271 aaKnown RBP15.26■□□□□ 0.03
CPNE1-227ENST00000498056 MORC2Q9Y6X9 1032 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-227ENST00000498056 BRCA2P51587 3418 aa15.26■□□□□ 0.03
CPNE1-227ENST00000498056 CUTAO60888 179 aa15.25■□□□□ 0.03
CPNE1-227ENST00000498056 ADAMTS4O75173 837 aa15.25■□□□□ 0.03
CPNE1-227ENST00000498056 PSAPP07602 524 aa15.25■□□□□ 0.03
CPNE1-227ENST00000498056 SUPT20HL2P0C7V6 817 aa15.25■□□□□ 0.03
CPNE1-227ENST00000498056 LONP1P36776 959 aaKnown RBP15.25■□□□□ 0.03
CPNE1-227ENST00000498056 TXLNAP40222 546 aa15.25■□□□□ 0.03
CPNE1-227ENST00000498056 GJA9P57773 515 aa15.25■□□□□ 0.03
CPNE1-227ENST00000498056 ZRSR1Q15695 479 aaKnown RBP15.25■□□□□ 0.03
CPNE1-227ENST00000498056 SPECC1Q5M775 1068 aa15.25■□□□□ 0.03
CPNE1-227ENST00000498056 MIS18BP1Q6P0N0 1132 aa15.25■□□□□ 0.03
CPNE1-227ENST00000498056 IGSF22Q8N9C0 903 aa15.25■□□□□ 0.03
CPNE1-227ENST00000498056 UPF3AQ9H1J1 476 aaKnown RBP15.25■□□□□ 0.03
CPNE1-227ENST00000498056 RCOR1Q9UKL0 485 aa15.25■□□□□ 0.03
CPNE1-227ENST00000498056 PCDHA7Q9UN72 937 aa15.25■□□□□ 0.03
CPNE1-227ENST00000498056 Q9Y3F1 56 aa15.25■□□□□ 0.03
CPNE1-227ENST00000498056 EMSYQ7Z589 1322 aa15.24■□□□□ 0.03
CPNE1-227ENST00000498056 IGSF9BQ9UPX0 1349 aa15.24■□□□□ 0.03
CPNE1-227ENST00000498056 GOLGA6L4A6NEF3 574 aa15.24■□□□□ 0.03
CPNE1-227ENST00000498056 LGALS2P05162 132 aa15.24■□□□□ 0.03
CPNE1-227ENST00000498056 MYL3P08590 195 aa15.24■□□□□ 0.03
CPNE1-227ENST00000498056 CDC25AP30304 524 aa15.24■□□□□ 0.03
CPNE1-227ENST00000498056 DGKDQ16760 1214 aa15.24■□□□□ 0.03
CPNE1-227ENST00000498056 KRT79Q5XKE5 535 aa15.24■□□□□ 0.03
CPNE1-227ENST00000498056 B3GNT9Q6UX72 402 aa15.24■□□□□ 0.03
CPNE1-227ENST00000498056 CCDC60Q8IWA6 550 aaPredicted RBP15.24■□□□□ 0.03
CPNE1-227ENST00000498056 BANK1Q8NDB2 785 aa15.24■□□□□ 0.03
CPNE1-227ENST00000498056 RDM1Q8NG50 284 aa15.24■□□□□ 0.03
CPNE1-227ENST00000498056 SEPT1Q8WYJ6 367 aa15.24■□□□□ 0.03
CPNE1-227ENST00000498056 LXNQ9BS40 222 aa15.24■□□□□ 0.03
CPNE1-227ENST00000498056 AZI2Q9H6S1 392 aa15.24■□□□□ 0.03
CPNE1-227ENST00000498056 PCDHA10Q9Y5I2 948 aa15.24■□□□□ 0.03
CPNE1-227ENST00000498056 KDM3AQ9Y4C1 1321 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 GSTTP1A0A1W2PQM5 241 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 POTEB3A0JP26 581 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 POTEFA5A3E0 1075 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 KBTBD13C9JR72 458 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 GOLGA6L22H0YM25 854 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 MARK3P27448 753 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 CCT6AP40227 531 aaKnown RBP15.23■□□□□ 0.03
CPNE1-227ENST00000498056 CHMP4BP1P59074 171 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 CTTNQ14247 550 aaKnown RBP15.23■□□□□ 0.03
CPNE1-227ENST00000498056 UGCGQ16739 394 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 GNASQ5JWF2 1037 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 FAM160B1Q5W0V3 765 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 LHX8Q68G74 356 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 POTEBQ6S5H4 581 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 RNF180Q86T96 592 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 CABP7Q86V35 215 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 NEK9Q8TD19 979 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 SYMPKQ92797 1274 aaKnown RBP15.23■□□□□ 0.03
CPNE1-227ENST00000498056 GLG1Q92896 1179 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 DYDC2Q96IM9 177 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms