RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 GSTTP1A0A1W2PQM5 241 aa13.42□□□□□ -0.26
CUX1-210ENST00000497815 A6NJR5 290 aa13.42□□□□□ -0.26
CUX1-210ENST00000497815 KBTBD13C9JR72 458 aa13.42□□□□□ -0.26
CUX1-210ENST00000497815 ZNF286BP0CG31 522 aa13.42□□□□□ -0.26
CUX1-210ENST00000497815 TCF7P36402 384 aaPredicted RBP13.42□□□□□ -0.26
CUX1-210ENST00000497815 TECP42680 631 aa13.42□□□□□ -0.26
CUX1-210ENST00000497815 SOX10P56693 466 aa13.42□□□□□ -0.26
CUX1-210ENST00000497815 ATP2C1P98194 919 aaPredicted RBP13.42□□□□□ -0.26
CUX1-210ENST00000497815 KRT76Q01546 638 aa13.42□□□□□ -0.26
CUX1-210ENST00000497815 KCNA10Q16322 511 aa13.42□□□□□ -0.26
CUX1-210ENST00000497815 KLHDC9Q8NEP7 349 aa13.42□□□□□ -0.26
CUX1-210ENST00000497815 CRISPLD2Q9H0B8 497 aa13.42□□□□□ -0.26
CUX1-210ENST00000497815 VAV3Q9UKW4 847 aa13.42□□□□□ -0.26
CUX1-210ENST00000497815 ATP6V1DQ9Y5K8 247 aa13.42□□□□□ -0.26
CUX1-210ENST00000497815 CENPFP49454 3210 aa13.42□□□□□ -0.26
CUX1-210ENST00000497815 DOCK5Q9H7D0 1870 aa13.42□□□□□ -0.26
CUX1-210ENST00000497815 LAD1O00515 517 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 BACH1O14867 736 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 ZEB2O60315 1214 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 BMP15O95972 392 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 ASGR1P07306 291 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 EN2P19622 333 aaPredicted RBP13.41□□□□□ -0.26
CUX1-210ENST00000497815 MARCKSP29966 332 aaPredicted RBP13.41□□□□□ -0.26
CUX1-210ENST00000497815 STK38Q15208 465 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 PTPAQ15257 358 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 DGKDQ16760 1214 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 TMEM266Q2M3C6 531 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 ZNF746Q6NUN9 644 aaPredicted RBP13.41□□□□□ -0.26
CUX1-210ENST00000497815 CXCL17Q6UXB2 119 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 DTHD1Q6ZMT9 781 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 MIER3Q7Z3K6 550 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 TRIM50Q86XT4 487 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 SEPT1Q8WYJ6 367 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 FERMT2Q96AC1 680 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 DISC1Q9NRI5 854 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 FRMPD3Q5JV73 1810 aa13.41□□□□□ -0.26
CUX1-210ENST00000497815 VWA3AA6NCI4 1184 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 POTEMA6NI47 508 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 WDR64B1ANS9 1081 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 EML1O00423 815 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 DNM1LO00429 736 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 PPFIA4O75335 1185 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 LGALS2P05162 132 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 SUPT20HL2P0C7V6 817 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 CST5P28325 142 aaPredicted RBP13.4□□□□□ -0.26
CUX1-210ENST00000497815 NASPP49321 788 aaPredicted RBP13.4□□□□□ -0.26
CUX1-210ENST00000497815 JAK3P52333 1124 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 ACLYP53396 1101 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 NKX3-2P78367 333 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 SPIRE1Q08AE8 756 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 PPP2R5CQ13362 524 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 IL17AQ16552 155 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 CCSAPQ6IQ19 270 aaPredicted RBP13.4□□□□□ -0.26
CUX1-210ENST00000497815 SWSAP1Q6NVH7 229 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 MIS18BP1Q6P0N0 1132 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 ABHD15Q6UXT9 468 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 SMAP1Q8IYB5 467 aaPredicted RBP13.4□□□□□ -0.26
CUX1-210ENST00000497815 PCSK9Q8NBP7 692 aaKnown RBP13.4□□□□□ -0.26
CUX1-210ENST00000497815 DIS3LQ8TF46 1054 aaKnown RBP13.4□□□□□ -0.26
CUX1-210ENST00000497815 PPP1R13LQ8WUF5 828 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 GLG1Q92896 1179 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 VTI1AQ96AJ9 217 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 POLR3EQ9NVU0 708 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 CFAP45Q9UL16 551 aa13.4□□□□□ -0.26
CUX1-210ENST00000497815 PSAPP07602 524 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 MARK3P27448 753 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 SFNP31947 248 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 PRPHP41219 470 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 PSMC6P62333 389 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 KRT85P78386 507 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 PURAQ00577 322 aaKnown RBP13.39□□□□□ -0.27
CUX1-210ENST00000497815 GRIN1Q05586 938 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 SLC39A14Q15043 492 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 ATL3Q6DD88 541 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 B3GNT9Q6UX72 402 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 TRMT1LQ7Z2T5 733 aaKnown RBP13.39□□□□□ -0.27
CUX1-210ENST00000497815 CCDC60Q8IWA6 550 aaPredicted RBP13.39□□□□□ -0.27
CUX1-210ENST00000497815 LINC00301Q8NCQ3 95 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 BANK1Q8NDB2 785 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 AZI2Q9H6S1 392 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 GABBR1Q9UBS5 961 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 LRWD1Q9UFC0 647 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 PCDHA10Q9Y5I2 948 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 MYH15Q9Y2K3 1946 aa13.39□□□□□ -0.27
CUX1-210ENST00000497815 MOXD2PA6NHM9 499 aa13.38□□□□□ -0.27
CUX1-210ENST00000497815 PP2D1A8MPX8 630 aa13.38□□□□□ -0.27
CUX1-210ENST00000497815 SPTLC2O15270 562 aa13.38□□□□□ -0.27
CUX1-210ENST00000497815 KPNA6O60684 536 aa13.38□□□□□ -0.27
CUX1-210ENST00000497815 ATG7O95352 703 aa13.38□□□□□ -0.27
CUX1-210ENST00000497815 YEATS4O95619 227 aa13.38□□□□□ -0.27
CUX1-210ENST00000497815 HOXD8P13378 290 aaPredicted RBP13.38□□□□□ -0.27
CUX1-210ENST00000497815 MNX1P50219 401 aaPredicted RBP13.38□□□□□ -0.27
CUX1-210ENST00000497815 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
CUX1-210ENST00000497815 CYP4A11Q02928 519 aa13.38□□□□□ -0.27
CUX1-210ENST00000497815 FAM160B1Q5W0V3 765 aa13.38□□□□□ -0.27
CUX1-210ENST00000497815 ARL6IP4Q66PJ3 421 aaKnown RBP13.38□□□□□ -0.27
CUX1-210ENST00000497815 ANKLE1Q8NAG6 615 aa13.38□□□□□ -0.27
CUX1-210ENST00000497815 PAWRQ96IZ0 340 aaKnown RBP13.38□□□□□ -0.27
CUX1-210ENST00000497815 PCYT2Q99447 389 aa13.38□□□□□ -0.27
CUX1-210ENST00000497815 C16orf70Q9BSU1 422 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms