RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CLIC6Q96NY7 704 aa4.94□□□□□ -1.62
PSPC1-205ENST00000497722 CCDC113Q9H0I3 377 aa4.94□□□□□ -1.62
PSPC1-205ENST00000497722 C1QTNF3-AMACRE9PGA6 284 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 ACOT7O00154 380 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 PDPK1O15530 556 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 KLHL18O94889 574 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 SOD2P04179 222 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 COL6A2P12110 1019 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 GRIN1Q05586 938 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 PAN2Q504Q3 1202 aaKnown RBP4.93□□□□□ -1.62
PSPC1-205ENST00000497722 NBPF6Q5VWK0 638 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 PRAMEF18Q5VWM3 479 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 FOXB2Q5VYV0 432 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 BORAQ6PGQ7 559 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 TMC5Q6UXY8 1006 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 NBPF4Q96M43 638 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 WRNIP1Q96S55 665 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 SLITRK6Q9H5Y7 841 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 SMPD4Q9NXE4 827 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 PPP4R1LQ9P1A2 415 aa4.93□□□□□ -1.62
PSPC1-205ENST00000497722 CYP7B1O75881 506 aa4.92□□□□□ -1.62
PSPC1-205ENST00000497722 KNG1P01042 644 aa4.92□□□□□ -1.62
PSPC1-205ENST00000497722 IFRD2Q12894 506 aaPredicted RBP4.92□□□□□ -1.62
PSPC1-205ENST00000497722 SERINC3Q13530 473 aa4.92□□□□□ -1.62
PSPC1-205ENST00000497722 FAM124AQ86V42 546 aa4.92□□□□□ -1.62
PSPC1-205ENST00000497722 KLHL36Q8N4N3 616 aa4.92□□□□□ -1.62
PSPC1-205ENST00000497722 ZBTB38Q8NAP3 1195 aaPredicted RBP4.92□□□□□ -1.62
PSPC1-205ENST00000497722 SRPK1Q96SB4 655 aaKnown RBP4.92□□□□□ -1.62
PSPC1-205ENST00000497722 TMEM168Q9H0V1 697 aa4.92□□□□□ -1.62
PSPC1-205ENST00000497722 IPPKQ9H8X2 491 aa4.92□□□□□ -1.62
PSPC1-205ENST00000497722 DLL4Q9NR61 685 aa4.92□□□□□ -1.62
PSPC1-205ENST00000497722 KCND1Q9NSA2 647 aa4.92□□□□□ -1.62
PSPC1-205ENST00000497722 CROTQ9UKG9 612 aa4.92□□□□□ -1.62
PSPC1-205ENST00000497722 LAMTOR5O43504 91 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 DIAPH1O60610 1272 aaKnown RBP4.91□□□□□ -1.62
PSPC1-205ENST00000497722 CHGBP05060 677 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 CKMP06732 381 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 GNAT1P11488 350 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 GDF5P43026 501 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 EPHB4P54760 987 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 SPIRE1Q08AE8 756 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 CD276Q5ZPR3 534 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 LIMS2Q7Z4I7 341 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.91□□□□□ -1.62
PSPC1-205ENST00000497722 SCUBE1Q8IWY4 988 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 NUDT10Q8NFP7 164 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 DNERQ8NFT8 737 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 IGDCC4Q8TDY8 1250 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 NUDT11Q96G61 164 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 KCNJ15Q99712 375 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 WDR26Q9H7D7 661 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 L2HGDHQ9H9P8 463 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 SIRPGQ9P1W8 387 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 ADAM29Q9UKF5 820 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 DSEQ9UL01 958 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 TRAF6Q9Y4K3 522 aa4.91□□□□□ -1.62
PSPC1-205ENST00000497722 ZNF839A8K0R7 811 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 FAM47E-STBD1D6RA91 191 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 ARVCFO00192 962 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 GPR42O15529 346 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 IL18BPO95998 194 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 CYP1A1P04798 512 aaPredicted RBP4.9□□□□□ -1.63
PSPC1-205ENST00000497722 ZNF20P17024 532 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 RBL2Q08999 1139 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 NFATC3Q12968 1075 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 SURF1Q15526 300 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 NFE2L2Q16236 605 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 FAM209AQ5JX71 171 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 PHF19Q5T6S3 580 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 CPZQ66K79 652 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 VASNQ6EMK4 673 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 KCTD1Q719H9 257 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 MAMDC2Q7Z304 686 aaPredicted RBP4.9□□□□□ -1.63
PSPC1-205ENST00000497722 PCDH19Q8TAB3 1148 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 MRFAP1L1Q96HT8 127 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 EXOC2Q96KP1 924 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 MRIQ9BWK5 157 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 ZSWIM4Q9H7M6 989 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 CD248Q9HCU0 757 aa4.9□□□□□ -1.63
PSPC1-205ENST00000497722 AMY2AP04746 511 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 FAM153BP0C7A2 387 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 AMY2BP19961 511 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 PPP2CBP62714 309 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 PPP2CAP67775 309 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 PFKPQ01813 784 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 RASA3Q14644 834 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 BMS1Q14692 1282 aaKnown RBP4.89□□□□□ -1.63
PSPC1-205ENST00000497722 CDSNQ15517 529 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 SMAD2Q15796 467 aaKnown RBP4.89□□□□□ -1.63
PSPC1-205ENST00000497722 LONRF2Q1L5Z9 754 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 SKIDA1Q1XH10 827 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 MTERF2Q49AM1 385 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 TRMT10BQ6PF06 316 aaKnown RBP4.89□□□□□ -1.63
PSPC1-205ENST00000497722 Q6ZUG5 572 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 DPH6Q7L8W6 267 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 PLEKHH3Q7Z736 793 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 KBTBD2Q8IY47 623 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 PTPRN2Q92932 1015 aa4.89□□□□□ -1.63
PSPC1-205ENST00000497722 KISS1RQ969F8 398 aaPredicted RBP4.89□□□□□ -1.63
PSPC1-205ENST00000497722 AJUBAQ96IF1 538 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms