RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 FOXD4L3Q6VB84 417 aaPredicted RBP22.21■■□□□ 1.15
SCAMP3-209ENST00000497470 HSD17B14Q9BPX1 270 aa22.21■■□□□ 1.15
SCAMP3-209ENST00000497470 PYM1Q9BRP8 204 aaKnown RBP22.21■■□□□ 1.15
SCAMP3-209ENST00000497470 POLR3CQ9BUI4 534 aaPredicted RBP22.21■■□□□ 1.15
SCAMP3-209ENST00000497470 AP5M1Q9H0R1 490 aa22.21■■□□□ 1.15
SCAMP3-209ENST00000497470 UNC45AQ9H3U1 944 aa22.21■■□□□ 1.15
SCAMP3-209ENST00000497470 LRWD1Q9UFC0 647 aa22.21■■□□□ 1.15
SCAMP3-209ENST00000497470 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 VWA3AA6NCI4 1184 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 LGR5O75473 907 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 LYPLA2O95372 231 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 RPA1P27694 616 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 MARCKSP29966 332 aaPredicted RBP22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 TECP42680 631 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 CPT1AP50416 773 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 ACTR2P61160 394 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 TRIM32Q13049 653 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 MIS18BP1Q6P0N0 1132 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 TLK2Q86UE8 772 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 AFAP1L1Q8TED9 768 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 ZNF333Q96JL9 665 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 SPATA33Q96N06 139 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 GPR20Q99678 358 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 TUFT1Q9NNX1 390 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 DISC1Q9NRI5 854 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 EMSYQ7Z589 1322 aa22.2■■□□□ 1.14
SCAMP3-209ENST00000497470 CCNE2O96020 404 aa22.19■■□□□ 1.14
SCAMP3-209ENST00000497470 P4HBP07237 508 aaKnown RBP22.19■■□□□ 1.14
SCAMP3-209ENST00000497470 PSAPP07602 524 aa22.19■■□□□ 1.14
SCAMP3-209ENST00000497470 XRCC6P12956 609 aaKnown RBP eCLIP22.19■■□□□ 1.14
SCAMP3-209ENST00000497470 PTMSP20962 102 aa22.19■■□□□ 1.14
SCAMP3-209ENST00000497470 CCND3P30281 292 aaPredicted RBP22.19■■□□□ 1.14
SCAMP3-209ENST00000497470 PLPPR4Q7Z2D5 763 aa22.19■■□□□ 1.14
SCAMP3-209ENST00000497470 MIER3Q7Z3K6 550 aa22.19■■□□□ 1.14
SCAMP3-209ENST00000497470 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.19■■□□□ 1.143e-8■■■■■ 46.9
SCAMP3-209ENST00000497470 NT5C3AQ9H0P0 336 aa22.19■■□□□ 1.14
SCAMP3-209ENST00000497470 KDM3AQ9Y4C1 1321 aa22.19■■□□□ 1.14
SCAMP3-209ENST00000497470 NOP56O00567 594 aaKnown RBP22.18■■□□□ 1.14
SCAMP3-209ENST00000497470 ADCY6O43306 1168 aa22.18■■□□□ 1.14
SCAMP3-209ENST00000497470 ZEB2O60315 1214 aa22.18■■□□□ 1.14
SCAMP3-209ENST00000497470 TXLNAP40222 546 aa22.18■■□□□ 1.14
SCAMP3-209ENST00000497470 RESP18Q5W5W9 173 aa22.18■■□□□ 1.14
SCAMP3-209ENST00000497470 KRT79Q5XKE5 535 aa22.18■■□□□ 1.14
SCAMP3-209ENST00000497470 LHX8Q68G74 356 aa22.18■■□□□ 1.14
SCAMP3-209ENST00000497470 KLHDC9Q8NEP7 349 aa22.18■■□□□ 1.14
SCAMP3-209ENST00000497470 OR6J1Q8NGC5 347 aa22.18■■□□□ 1.14
SCAMP3-209ENST00000497470 TSEN34Q9BSV6 310 aaKnown RBP22.18■■□□□ 1.14
SCAMP3-209ENST00000497470 CSRNP2Q9H175 543 aa22.18■■□□□ 1.14
SCAMP3-209ENST00000497470 GSTTP1A0A1W2PQM5 241 aa22.17■■□□□ 1.14
SCAMP3-209ENST00000497470 DYNC1LI2O43237 492 aaPredicted RBP22.17■■□□□ 1.14
SCAMP3-209ENST00000497470 ADAMTS4O75173 837 aa22.17■■□□□ 1.14
SCAMP3-209ENST00000497470 SUPT20HL2P0C7V6 817 aa22.17■■□□□ 1.14
SCAMP3-209ENST00000497470 CNGA1P29973 690 aa22.17■■□□□ 1.14
SCAMP3-209ENST00000497470 UBA7P41226 1012 aa22.17■■□□□ 1.14
SCAMP3-209ENST00000497470 UBE2HP62256 183 aa22.17■■□□□ 1.14
SCAMP3-209ENST00000497470 DGKDQ16760 1214 aa22.17■■□□□ 1.14
SCAMP3-209ENST00000497470 HSDL1Q3SXM5 330 aa22.17■■□□□ 1.14
SCAMP3-209ENST00000497470 C4orf19Q8IY42 314 aa22.17■■□□□ 1.14
SCAMP3-209ENST00000497470 ARRDC4Q8NCT1 418 aa22.17■■□□□ 1.14
SCAMP3-209ENST00000497470 SH3TC2Q8TF17 1288 aa22.17■■□□□ 1.14
SCAMP3-209ENST00000497470 ATP6V0A1Q93050 837 aa22.17■■□□□ 1.14
SCAMP3-209ENST00000497470 MAFBQ9Y5Q3 323 aaPredicted RBP22.17■■□□□ 1.14
SCAMP3-209ENST00000497470 POTEFA5A3E0 1075 aa22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 GOLGA6L4A6NEF3 574 aa22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 EML1O00423 815 aa22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 CTAGE5O15320 804 aa22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 PSMC5P62195 406 aa22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 FAM160B1Q5W0V3 765 aa22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 PCSK9Q8NBP7 692 aaKnown RBP22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 COPS5Q92905 334 aa22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 EIF2AK1Q9BQI3 630 aaKnown RBP22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 SEZ6LQ9BYH1 1024 aa22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 SMARCAD1Q9H4L7 1026 aa22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 ZSWIM4Q9H7M6 989 aa22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 XPNPEP3Q9NQH7 507 aa22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 FAM13BQ9NYF5 915 aa22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 USP25Q9UHP3 1055 aa22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 PPME1Q9Y570 386 aa22.16■■□□□ 1.14
SCAMP3-209ENST00000497470 SYNRGQ9UMZ2 1314 aa22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 POTEMA6NI47 508 aa22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 CABYRO75952 493 aa22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 SLITRK3O94933 977 aa22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 GJB1P08034 283 aa22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 MMP3P08254 477 aa22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 CCL5P13501 91 aa22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 QARSP47897 775 aaKnown RBP22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 FSCN1Q16658 493 aaKnown RBP22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 NCAPH2Q6IBW4 605 aa22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 CCSAPQ6IQ19 270 aaPredicted RBP22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 SHC4Q6S5L8 630 aa22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 RNF180Q86T96 592 aa22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 AFG1LQ8WV93 481 aa22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 CUEDC2Q9H467 287 aa22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 PKD2L1Q9P0L9 805 aa22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 CCDC39Q9UFE4 941 aa22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 OGDHLQ9ULD0 1010 aa22.15■■□□□ 1.14
SCAMP3-209ENST00000497470 IGSF9BQ9UPX0 1349 aa22.14■■□□□ 1.14
SCAMP3-209ENST00000497470 SPATA31C1P0DKV0 1188 aa22.14■■□□□ 1.13
SCAMP3-209ENST00000497470 TCF7P36402 384 aaPredicted RBP22.14■■□□□ 1.13
SCAMP3-209ENST00000497470 GRIN1Q05586 938 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms