RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 E4F1Q66K89 784 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 SPTY2D1Q68D10 685 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 DENND5AQ6IQ26 1287 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 GPAT2Q6NUI2 795 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 FOXR1Q6PIV2 292 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 C22orf34Q6ZV56 151 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 C12orf40Q86WS4 652 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 C1orf162Q8NEQ5 155 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 FLAD1Q8NFF5 587 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 NPLOC4Q8TAT6 608 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 USP33Q8TEY7 942 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 RNF141Q8WVD5 230 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 UBE2Q2Q8WVN8 375 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 USP7Q93009 1102 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 GJA10Q969M2 543 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 TTC17Q96AE7 1141 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 E2F7Q96AV8 911 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 MTMR8Q96EF0 704 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 KLHDC7BQ96G42 594 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 FUBP3Q96I24 572 aaKnown RBP eCLIP3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 TRIM47Q96LD4 638 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 FANCD2OSQ96PS1 177 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 PSMG3-AS1Q96PY0 264 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 ARPC5LQ9BPX5 153 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 C1QTNF1Q9BXJ1 281 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 LACRTQ9GZZ8 138 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 CCDC8Q9H0W5 538 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 ATXN3LQ9H3M9 355 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 EMC7Q9NPA0 242 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 AASDHPPTQ9NRN7 309 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 GPR27Q9NS67 375 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 KLHL3Q9UH77 587 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 NDOR1Q9UHB4 597 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 ANAPC4Q9UJX5 808 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 CEP131Q9UPN4 1083 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 RPTORQ8N122 1335 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 ARFGEF1Q9Y6D6 1849 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 TRPM1Q7Z4N2 1603 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 BPTFQ12830 3046 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 USP34Q70CQ2 3546 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 NAIPQ13075 1403 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 NHSQ6T4R5 1651 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 N4BP2Q86UW6 1770 aaPredicted RBP3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 CCDC189A1A4V9 331 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 AXIN1O15169 862 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 FKBP9O95302 570 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 CRTAMO95727 393 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 CFBP00751 764 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 ASGR2P07307 311 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 VSIG8P0DPA2 414 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 BMP4P12644 408 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 EN2P19622 333 aaPredicted RBP3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 ID4P47928 161 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 PCBP4P57723 403 aaKnown RBP3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 RASSF7Q02833 373 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 ACAP1Q15027 740 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 FOXD4L6Q3SYB3 417 aaPredicted RBP3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 PPM1JQ5JR12 505 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 CST9Q5W186 159 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 FBXO46Q6PJ61 603 aaPredicted RBP3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 FOXD4L3Q6VB84 417 aaPredicted RBP3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 FKBP9P1Q75LS8 142 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 PODNQ7Z5L7 613 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 DDX53Q86TM3 631 aaKnown RBP3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 IL22RA1Q8N6P7 574 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 EFHBQ8N7U6 833 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 GOLGA6L1Q8N7Z2 621 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 TMEM145Q8NBT3 493 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 GALNT11Q8NCW6 608 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 BAHD1Q8TBE0 780 aaPredicted RBP3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 BTN2A2Q8WVV5 523 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 WNK4Q96J92 1243 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 KREMEN1Q96MU8 473 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 MPHOSPH6Q99547 160 aaKnown RBP3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 FOXQ1Q9C009 403 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 SLC12A5Q9H2X9 1139 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 TAF1DQ9H5J8 278 aaPredicted RBP3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 SENP2Q9HC62 589 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 KLHL11Q9NVR0 708 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 PIM2Q9P1W9 311 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 TAGLN3Q9UI15 199 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 PPP1R9AQ9ULJ8 1098 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 AKT3Q9Y243 479 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 ST14Q9Y5Y6 855 aa3.11□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZFHX2Q9C0A1 2572 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 KIF13BQ9NQT8 1826 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 REV3LO60673 3130 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 BRCA1P38398 1863 aaKnown RBP3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 PRAMEF27A3QJZ7 478 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 VSTM5A8MXK1 200 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 LINC01387J3KSC0 135 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 M0R2C6 588 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 EXOC5O00471 708 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 NRG2O14511 850 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 KPNA6O60684 536 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 GLRX3O76003 335 aaKnown RBP3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZRANB2O95218 330 aaKnown RBP eCLIP3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 FOSP01100 380 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 ALBP02768 609 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms