RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 DALRD3Q5D0E6 543 aaKnown RBP4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 TRIM61Q5EBN2 209 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 ZC3H12BQ5HYM0 836 aaKnown RBP4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 FYB2Q5VWT5 728 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 NSMFQ6X4W1 530 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 FAM9BQ8IZU0 186 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 ANKS4BQ8N8V4 417 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 ZSWIM2Q8NEG5 633 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 DPF3Q92784 378 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 SCYL1Q96KG9 808 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 DHRS4Q9BTZ2 278 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 CDIP1Q9H305 208 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 RC3H2Q9HBD1 1191 aaKnown RBP4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 SFMBT1Q9UHJ3 866 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 FBXL7Q9UJT9 491 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 AGLP35573 1532 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 ZC3H13Q5T200 1668 aaKnown RBP4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 ABCC1P33527 1531 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 ALDH1L1O75891 902 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 PAPLNO95428 1278 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 MSL3P1P0C860 447 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 LCP1P13796 627 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 TRHRP34981 398 aaPredicted RBP4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 ECI1P42126 302 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 SEPHS1P49903 392 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 DUSP4Q13115 394 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 TTF1Q15361 905 aaPredicted RBP4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 E4F1Q66K89 784 aaPredicted RBP4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 STYK1Q6J9G0 422 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 NLRX1Q86UT6 975 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 NLRP10Q86W26 655 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 DDX42Q86XP3 938 aaKnown RBP eCLIP4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 SCUBE1Q8IWY4 988 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 Q8N1Y9 231 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 GPATCH11Q8N954 259 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 GSTCDQ8NEC7 633 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 KCTD13Q8WZ19 329 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 SLC26A8Q96RN1 970 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 MCOLN1Q9GZU1 580 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 C19orf44Q9H6X5 657 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 ARNT2Q9HBZ2 717 aa4.69□□□□□ -1.66
EXOSC3-208ENST00000496910 ABCA10Q8WWZ4 1543 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 A0A1W2PQ45 241 aaPredicted RBP4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 A0A1W2PQY0 241 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 SSU72P8A0A1W2PR75 194 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 C7orf72A4D263 438 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 FITM1A5D6W6 292 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 PSPNO60542 156 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 MSCO60682 206 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 CAND2O75155 1236 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 BDNFP23560 247 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 SUMO1P63165 101 aaKnown RBP4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 MVKQ03426 396 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 CHRNEQ04844 493 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 MAP3K12Q12852 859 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 SAFB2Q14151 953 aaKnown RBP eCLIP4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 CBX2Q14781 532 aaPredicted RBP4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 C21orf62-AS1Q17RA5 79 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 KRBA2Q6ZNG9 492 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 C14orf80Q86SX3 495 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 THNSL2Q86YJ6 484 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 CPNE8Q86YQ8 564 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 KSR1Q8IVT5 923 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 PPIL6Q8IXY8 311 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 RCBTB1Q8NDN9 531 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 NLGN2Q8NFZ4 835 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 ASIC4Q96FT7 647 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 CLUHP3Q96NS8 147 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 ARPC5LQ9BPX5 153 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 SENP7Q9BQF6 1050 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 MTA3Q9BTC8 594 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 NCOA5Q9HCD5 579 aaKnown RBP4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 ACSL6Q9UKU0 697 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 CD2APQ9Y5K6 639 aa4.68□□□□□ -1.66
EXOSC3-208ENST00000496910 ITSN2Q9NZM3 1697 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 SETD5Q9C0A6 1442 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 NPHP3-ACAD11A0A0J9YXS1 232 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 SHTN1A0MZ66 631 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 IFRD1O00458 451 aaPredicted RBP4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 PLIN1O60240 522 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 ASMTLO95671 621 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 SCGB1D2O95969 90 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 PAMP19021 973 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 CNGA1P29973 690 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 KCNJ6P48051 423 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 EPHB1P54762 984 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 RTP1P59025 263 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 MCL1Q07820 350 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 KCNAB2Q13303 367 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 OS9Q13438 667 aaPredicted RBP4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 PPP2R5AQ15172 486 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 KCNT2Q6UVM3 1135 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 CEP128Q6ZU80 1094 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 ATG4DQ86TL0 474 aaPredicted RBP4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 SAMD3Q8N6K7 520 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 SLC7A14Q8TBB6 771 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 CCDC120Q96HB5 630 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms