RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 PITPNM1O00562 1244 aa13.95□□□□□ -0.18
HDLBP-246ENST00000496569 EPB41L2O43491 1005 aaKnown RBP13.95□□□□□ -0.18
HDLBP-246ENST00000496569 NBNO60934 754 aa13.95□□□□□ -0.18
HDLBP-246ENST00000496569 LARGE1O95461 756 aa13.95□□□□□ -0.18
HDLBP-246ENST00000496569 CTSHP09668 335 aa13.95□□□□□ -0.18
HDLBP-246ENST00000496569 FAM86B2P0C5J1 330 aa13.95□□□□□ -0.18
HDLBP-246ENST00000496569 EVCP57679 992 aa13.95□□□□□ -0.18
HDLBP-246ENST00000496569 ARHGAP4P98171 946 aa13.95□□□□□ -0.18
HDLBP-246ENST00000496569 ATP6V0A1Q93050 837 aa13.95□□□□□ -0.18
HDLBP-246ENST00000496569 TIFAQ96CG3 184 aa13.95□□□□□ -0.18
HDLBP-246ENST00000496569 PCYT2Q99447 389 aa13.95□□□□□ -0.18
HDLBP-246ENST00000496569 CDX2Q99626 313 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-246ENST00000496569 RNF26Q9BY78 433 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-246ENST00000496569 ZMYND12Q9H0C1 365 aa13.95□□□□□ -0.18
HDLBP-246ENST00000496569 EHMT1Q9H9B1 1298 aa13.95□□□□□ -0.18
HDLBP-246ENST00000496569 KCNH7Q9NS40 1196 aa13.95□□□□□ -0.18
HDLBP-246ENST00000496569 COL4A4P53420 1690 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-246ENST00000496569 ESYT2A0FGR8 921 aa13.94□□□□□ -0.18
HDLBP-246ENST00000496569 SELPP16109 830 aa13.94□□□□□ -0.18
HDLBP-246ENST00000496569 HOXC8P31273 242 aa13.94□□□□□ -0.18
HDLBP-246ENST00000496569 AKAP17AQ02040 695 aaKnown RBP13.94□□□□□ -0.18
HDLBP-246ENST00000496569 PTK7Q13308 1070 aa13.94□□□□□ -0.18
HDLBP-246ENST00000496569 AP3B2Q13367 1082 aa13.94□□□□□ -0.18
HDLBP-246ENST00000496569 GRIN2CQ14957 1233 aa13.94□□□□□ -0.18
HDLBP-246ENST00000496569 RPUSD2Q8IZ73 545 aaKnown RBP13.94□□□□□ -0.18
HDLBP-246ENST00000496569 CAGE1Q8TC20 777 aa13.94□□□□□ -0.18
HDLBP-246ENST00000496569 AFAP1L1Q8TED9 768 aa13.94□□□□□ -0.18
HDLBP-246ENST00000496569 LMBR1Q8WVP7 490 aa13.94□□□□□ -0.18
HDLBP-246ENST00000496569 TPCN1Q9ULQ1 816 aa13.94□□□□□ -0.18
HDLBP-246ENST00000496569 SLC4A7Q9Y6M7 1214 aa13.94□□□□□ -0.18
HDLBP-246ENST00000496569 EDIL3O43854 480 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 ARHGEF15O94989 841 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 FOSP01100 380 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-246ENST00000496569 ZNF76P36508 570 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 THPOP40225 353 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 AK2P54819 239 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 RBL2Q08999 1139 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 SCRN1Q12765 414 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 CEP55Q53EZ4 464 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 RUFY4Q6ZNE9 571 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 SERINC5Q86VE9 423 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 PLA2G4DQ86XP0 818 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 REXO1Q8N1G1 1221 aaKnown RBP13.93□□□□□ -0.18
HDLBP-246ENST00000496569 CCDC155Q8N6L0 562 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 SEPT1Q8WYJ6 367 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 CDHR1Q96JP9 859 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 ZNF576Q9H609 170 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 AGO4Q9HCK5 861 aaKnown RBP13.93□□□□□ -0.18
HDLBP-246ENST00000496569 C6orf50Q9HD87 102 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 JPH1Q9HDC5 661 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-246ENST00000496569 GJB4Q9NTQ9 266 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 SLC9A2Q9UBY0 812 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 STXBP5LQ9Y2K9 1186 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 REV3LO60673 3130 aa13.93□□□□□ -0.18
HDLBP-246ENST00000496569 IGLV3-22A0A075B6J6 115 aa13.92□□□□□ -0.18
HDLBP-246ENST00000496569 MEIS1O00470 390 aa13.92□□□□□ -0.18
HDLBP-246ENST00000496569 CCNE2O96020 404 aa13.92□□□□□ -0.18
HDLBP-246ENST00000496569 RFC2P35250 354 aa13.92□□□□□ -0.18
HDLBP-246ENST00000496569 ACTR2P61160 394 aa13.92□□□□□ -0.18
HDLBP-246ENST00000496569 IGBP1P78318 339 aa13.92□□□□□ -0.18
HDLBP-246ENST00000496569 DEFB103AP81534 67 aa13.92□□□□□ -0.18
HDLBP-246ENST00000496569 SSRP1Q08945 709 aaKnown RBP13.92□□□□□ -0.18
HDLBP-246ENST00000496569 SPRED2Q7Z698 418 aa13.92□□□□□ -0.18
HDLBP-246ENST00000496569 NECAB1Q8N987 351 aa13.92□□□□□ -0.18
HDLBP-246ENST00000496569 TRAPPC12Q8WVT3 735 aa13.92□□□□□ -0.18
HDLBP-246ENST00000496569 CRYGNQ8WXF5 182 aa13.92□□□□□ -0.18
HDLBP-246ENST00000496569 GLG1Q92896 1179 aa13.92□□□□□ -0.18
HDLBP-246ENST00000496569 ZNF274Q96GC6 653 aaPredicted RBP13.92□□□□□ -0.18
HDLBP-246ENST00000496569 MTIF3Q9H2K0 278 aaKnown RBP13.92□□□□□ -0.18
HDLBP-246ENST00000496569 ZNF215Q9UL58 517 aaPredicted RBP13.92□□□□□ -0.18
HDLBP-246ENST00000496569 NLRC5Q86WI3 1866 aa13.91□□□□□ -0.18
HDLBP-246ENST00000496569 CPLX1O14810 134 aa13.91□□□□□ -0.18
HDLBP-246ENST00000496569 PFKMP08237 780 aa13.91□□□□□ -0.18
HDLBP-246ENST00000496569 ATP2A2P16615 1042 aaKnown RBP13.91□□□□□ -0.18
HDLBP-246ENST00000496569 NLRP5P59047 1200 aa13.91□□□□□ -0.18
HDLBP-246ENST00000496569 ADAM17P78536 824 aa13.91□□□□□ -0.18
HDLBP-246ENST00000496569 PPFIA1Q13136 1202 aa13.91□□□□□ -0.18
HDLBP-246ENST00000496569 NPY5RQ15761 445 aa13.91□□□□□ -0.18
HDLBP-246ENST00000496569 GIMAP8Q8ND71 665 aaPredicted RBP13.91□□□□□ -0.18
HDLBP-246ENST00000496569 CCDC12Q8WUD4 166 aaPredicted RBP13.91□□□□□ -0.18
HDLBP-246ENST00000496569 GJA10Q969M2 543 aa13.91□□□□□ -0.18
HDLBP-246ENST00000496569 SDF4Q9BRK5 362 aa13.91□□□□□ -0.18
HDLBP-246ENST00000496569 PRDM12Q9H4Q4 367 aa13.91□□□□□ -0.18
HDLBP-246ENST00000496569 KCNJ14Q9UNX9 436 aa13.91□□□□□ -0.18
HDLBP-246ENST00000496569 PRRC2BQ5JSZ5 2229 aaKnown RBP13.91□□□□□ -0.18
HDLBP-246ENST00000496569 NFASCO94856 1347 aa13.9□□□□□ -0.18
HDLBP-246ENST00000496569 EMSYQ7Z589 1322 aa13.9□□□□□ -0.18
HDLBP-246ENST00000496569 CUL9Q8IWT3 2517 aa13.9□□□□□ -0.18
HDLBP-246ENST00000496569 LGR5O75473 907 aa13.9□□□□□ -0.18
HDLBP-246ENST00000496569 CTDNEP1O95476 244 aa13.9□□□□□ -0.18
HDLBP-246ENST00000496569 ACTN1P12814 892 aa13.9□□□□□ -0.18
HDLBP-246ENST00000496569 FOSL2P15408 326 aa13.9□□□□□ -0.18
HDLBP-246ENST00000496569 FOSBP53539 338 aa13.9□□□□□ -0.18
HDLBP-246ENST00000496569 WDR5P61964 334 aaKnown RBP13.9□□□□□ -0.18
HDLBP-246ENST00000496569 GRIK4Q16099 956 aa13.9□□□□□ -0.18
HDLBP-246ENST00000496569 PRR16Q569H4 304 aa13.9□□□□□ -0.18
HDLBP-246ENST00000496569 FAM117BQ6P1L5 589 aa13.9□□□□□ -0.18
HDLBP-246ENST00000496569 TRIM22Q8IYM9 498 aa13.9□□□□□ -0.18
HDLBP-246ENST00000496569 CCDC148Q8NFR7 591 aa13.9□□□□□ -0.18
HDLBP-246ENST00000496569 GLT8D2Q9H1C3 349 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms