RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 RSPH3Q86UC2 560 aa13.71□□□□□ -0.21
ATG3-209ENST00000496423 MCF2L2Q86YR7 1114 aa13.71□□□□□ -0.21
ATG3-209ENST00000496423 BORCS6Q96GS4 357 aa13.71□□□□□ -0.21
ATG3-209ENST00000496423 S1PR5Q9H228 398 aa13.71□□□□□ -0.21
ATG3-209ENST00000496423 MRPL42Q9Y6G3 142 aaKnown RBP13.71□□□□□ -0.21
ATG3-209ENST00000496423 PATL2C9JE40 543 aaKnown RBP13.7□□□□□ -0.22
ATG3-209ENST00000496423 STK25O00506 426 aa13.7□□□□□ -0.22
ATG3-209ENST00000496423 SMIM10L2AP0DMW4 78 aa13.7□□□□□ -0.22
ATG3-209ENST00000496423 SMIM10L2BP0DMW5 78 aa13.7□□□□□ -0.22
ATG3-209ENST00000496423 HOXD8P13378 290 aaPredicted RBP13.7□□□□□ -0.22
ATG3-209ENST00000496423 RFX1P22670 979 aa13.7□□□□□ -0.22
ATG3-209ENST00000496423 ITIH3Q06033 890 aa13.7□□□□□ -0.22
ATG3-209ENST00000496423 SPOUT1Q5T280 376 aaKnown RBP13.7□□□□□ -0.22
ATG3-209ENST00000496423 ZKSCAN2Q63HK3 967 aa13.7□□□□□ -0.22
ATG3-209ENST00000496423 RMDN3Q96TC7 470 aa13.7□□□□□ -0.22
ATG3-209ENST00000496423 RNPEPQ9H4A4 650 aa13.7□□□□□ -0.22
ATG3-209ENST00000496423 GPCPD1Q9NPB8 672 aa13.7□□□□□ -0.22
ATG3-209ENST00000496423 MTHFRP42898 656 aa13.69□□□□□ -0.22
ATG3-209ENST00000496423 COL9A2Q14055 689 aaPredicted RBP13.69□□□□□ -0.22
ATG3-209ENST00000496423 HIC1Q14526 733 aa13.69□□□□□ -0.22
ATG3-209ENST00000496423 MYSM1Q5VVJ2 828 aa13.69□□□□□ -0.22
ATG3-209ENST00000496423 TTBK2Q6IQ55 1244 aa13.69□□□□□ -0.22
ATG3-209ENST00000496423 FTSJ3Q8IY81 847 aaKnown RBP13.69□□□□□ -0.22
ATG3-209ENST00000496423 IFNL3Q8IZI9 196 aa13.69□□□□□ -0.22
ATG3-209ENST00000496423 ZDHHC14Q8IZN3 488 aa13.69□□□□□ -0.22
ATG3-209ENST00000496423 TDRD5Q8NAT2 981 aaKnown RBP13.69□□□□□ -0.22
ATG3-209ENST00000496423 RASGRP4Q8TDF6 673 aa13.69□□□□□ -0.22
ATG3-209ENST00000496423 FTHL17Q9BXU8 183 aa13.69□□□□□ -0.22
ATG3-209ENST00000496423 MLXIPQ9HAP2 919 aa13.69□□□□□ -0.22
ATG3-209ENST00000496423 PUF60Q9UHX1 559 aaKnown RBP13.69□□□□□ -0.22
ATG3-209ENST00000496423 FBXL21Q9UKT6 434 aa13.69□□□□□ -0.22
ATG3-209ENST00000496423 LRFN2Q9ULH4 789 aa13.69□□□□□ -0.22
ATG3-209ENST00000496423 VPS13AQ96RL7 3174 aa13.69□□□□□ -0.22
ATG3-209ENST00000496423 BAHCC1Q9P281 2608 aa13.69□□□□□ -0.22
ATG3-209ENST00000496423 TPRP12270 2363 aaKnown RBP13.68□□□□□ -0.22
ATG3-209ENST00000496423 TTC3P53804 2025 aa13.68□□□□□ -0.22
ATG3-209ENST00000496423 PRR5-ARHGAP8B1AHC4 643 aa13.68□□□□□ -0.22
ATG3-209ENST00000496423 C2CD4DB7Z1M9 353 aa13.68□□□□□ -0.22
ATG3-209ENST00000496423 TGFB3P10600 412 aa13.68□□□□□ -0.22
ATG3-209ENST00000496423 ARHGAP8P85298 464 aa13.68□□□□□ -0.22
ATG3-209ENST00000496423 CELF3Q5SZQ8 465 aaKnown RBP13.68□□□□□ -0.22
ATG3-209ENST00000496423 NPAS4Q8IUM7 802 aa13.68□□□□□ -0.22
ATG3-209ENST00000496423 APPBP2Q92624 585 aa13.68□□□□□ -0.22
ATG3-209ENST00000496423 CASP10Q92851 521 aa13.68□□□□□ -0.22
ATG3-209ENST00000496423 SECISBP2LQ93073 1101 aaKnown RBP13.68□□□□□ -0.22
ATG3-209ENST00000496423 TAAR1Q96RJ0 339 aa13.68□□□□□ -0.22
ATG3-209ENST00000496423 C16orf70Q9BSU1 422 aa13.68□□□□□ -0.22
ATG3-209ENST00000496423 APOL5Q9BWW9 433 aa13.68□□□□□ -0.22
ATG3-209ENST00000496423 USP26Q9BXU7 913 aa13.68□□□□□ -0.22
ATG3-209ENST00000496423 NAPBQ9H115 298 aa13.68□□□□□ -0.22
ATG3-209ENST00000496423 RAB11FIP3O75154 756 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 CHGBP05060 677 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 ZFYP08048 801 aaPredicted RBP13.67□□□□□ -0.22
ATG3-209ENST00000496423 GHRP10912 638 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 HOXC8P31273 242 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 ACAP1Q15027 740 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 HSDL1Q3SXM5 330 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 USH1GQ495M9 461 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 PAN2Q504Q3 1202 aaKnown RBP13.67□□□□□ -0.22
ATG3-209ENST00000496423 CEP85Q6P2H3 762 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 ITPRIPQ8IWB1 547 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 TMEM260Q9NX78 707 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 LIMD1Q9UGP4 676 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 ZNF215Q9UL58 517 aaPredicted RBP13.67□□□□□ -0.22
ATG3-209ENST00000496423 TNNQ9UQP3 1299 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 R4GN57 208 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 KAT6AQ92794 2004 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 DMXL1Q9Y485 3027 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 KIAA1671Q9BY89 1806 aa13.67□□□□□ -0.22
ATG3-209ENST00000496423 EP300Q09472 2414 aaPredicted RBP13.66□□□□□ -0.22
ATG3-209ENST00000496423 ABCB11O95342 1321 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 FRMPD2Q68DX3 1309 aaPredicted RBP13.66□□□□□ -0.22
ATG3-209ENST00000496423 CCDC171Q6TFL3 1326 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 PLXNA4Q9HCM2 1894 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 NOP56O00567 594 aaKnown RBP13.66□□□□□ -0.22
ATG3-209ENST00000496423 GPAA1O43292 621 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 PI15O43692 258 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 GGPS1O95749 300 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 RPLP2P05387 115 aaKnown RBP13.66□□□□□ -0.22
ATG3-209ENST00000496423 NR3C2P08235 984 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 TOP1P11387 765 aaKnown RBP13.66□□□□□ -0.22
ATG3-209ENST00000496423 PPARAQ07869 468 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 CWF19L1Q69YN2 538 aaKnown RBP13.66□□□□□ -0.22
ATG3-209ENST00000496423 LLGL2Q6P1M3 1020 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 TAF2Q6P1X5 1199 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 SYCE2Q6PIF2 218 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 THNSL1Q8IYQ7 743 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 SYTL5Q8TDW5 730 aaPredicted RBP13.66□□□□□ -0.22
ATG3-209ENST00000496423 ACSF2Q96CM8 615 aaPredicted RBP13.66□□□□□ -0.22
ATG3-209ENST00000496423 OSBPL7Q9BZF2 842 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 ADAM7Q9H2U9 754 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 EHMT1Q9H9B1 1298 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 NGRNQ9NPE2 291 aaKnown RBP13.66□□□□□ -0.22
ATG3-209ENST00000496423 SETD4Q9NVD3 440 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 NCDNQ9UBB6 729 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 CDV3Q9UKY7 258 aaKnown RBP13.66□□□□□ -0.22
ATG3-209ENST00000496423 USTQ9Y2C2 406 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 NCOR2Q9Y618 2525 aa13.66□□□□□ -0.22
ATG3-209ENST00000496423 ACACBO00763 2458 aa13.65□□□□□ -0.22
ATG3-209ENST00000496423 RANBP6O60518 1105 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms