RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 JPH1Q9HDC5 661 aaPredicted RBP20■□□□□ 0.79
RHBDD3-207ENST00000496342 LOXHD1Q8IVV2 1947 aa20■□□□□ 0.79
RHBDD3-207ENST00000496342 RBM25P49756 843 aaKnown RBP19.99■□□□□ 0.79
RHBDD3-207ENST00000496342 LRIT3Q3SXY7 679 aa19.99■□□□□ 0.79
RHBDD3-207ENST00000496342 TMEM240Q5SV17 173 aa19.99■□□□□ 0.79
RHBDD3-207ENST00000496342 CCDC83Q8IWF9 413 aa19.99■□□□□ 0.79
RHBDD3-207ENST00000496342 GIMAP8Q8ND71 665 aaPredicted RBP19.99■□□□□ 0.79
RHBDD3-207ENST00000496342 OXER1Q8TDS5 423 aa19.99■□□□□ 0.79
RHBDD3-207ENST00000496342 RNPC3Q96LT9 517 aaKnown RBP19.99■□□□□ 0.79
RHBDD3-207ENST00000496342 PCYT2Q99447 389 aa19.99■□□□□ 0.79
RHBDD3-207ENST00000496342 PHF20Q9BVI0 1012 aa19.99■□□□□ 0.79
RHBDD3-207ENST00000496342 SLC9A2Q9UBY0 812 aa19.99■□□□□ 0.79
RHBDD3-207ENST00000496342 CCNE2O96020 404 aa19.98■□□□□ 0.79
RHBDD3-207ENST00000496342 PRR16Q569H4 304 aa19.98■□□□□ 0.79
RHBDD3-207ENST00000496342 ZNF365Q70YC5 407 aa19.98■□□□□ 0.79
RHBDD3-207ENST00000496342 DEFB128Q7Z7B8 93 aa19.98■□□□□ 0.79
RHBDD3-207ENST00000496342 DAGLBQ8NCG7 672 aa19.98■□□□□ 0.79
RHBDD3-207ENST00000496342 TBCKQ8TEA7 893 aa19.98■□□□□ 0.79
RHBDD3-207ENST00000496342 SEPT1Q8WYJ6 367 aa19.98■□□□□ 0.79
RHBDD3-207ENST00000496342 GJA10Q969M2 543 aa19.98■□□□□ 0.79
RHBDD3-207ENST00000496342 LENG9Q96B70 501 aa19.98■□□□□ 0.79
RHBDD3-207ENST00000496342 SDF4Q9BRK5 362 aa19.98■□□□□ 0.79
RHBDD3-207ENST00000496342 RNPEPQ9H4A4 650 aa19.98■□□□□ 0.79
RHBDD3-207ENST00000496342 IL23AQ9NPF7 189 aa19.98■□□□□ 0.79
RHBDD3-207ENST00000496342 GTF3C3Q9Y5Q9 886 aa19.98■□□□□ 0.79
RHBDD3-207ENST00000496342 NFASCO94856 1347 aa19.98■□□□□ 0.79
RHBDD3-207ENST00000496342 FAM205CA6NFA0 338 aa19.97■□□□□ 0.79
RHBDD3-207ENST00000496342 MAFGO15525 162 aa19.97■□□□□ 0.79
RHBDD3-207ENST00000496342 TDP2O95551 362 aa19.97■□□□□ 0.79
RHBDD3-207ENST00000496342 ACTR2P61160 394 aa19.97■□□□□ 0.79
RHBDD3-207ENST00000496342 NIPA1Q7RTP0 329 aa19.97■□□□□ 0.79
RHBDD3-207ENST00000496342 SETD4Q9NVD3 440 aa19.97■□□□□ 0.79
RHBDD3-207ENST00000496342 EVPLQ92817 2033 aa19.97■□□□□ 0.79
RHBDD3-207ENST00000496342 C17orf102A2RUQ5 167 aa19.96■□□□□ 0.79
RHBDD3-207ENST00000496342 DHX15O43143 795 aaKnown RBP19.96■□□□□ 0.79
RHBDD3-207ENST00000496342 TREHO43280 583 aa19.96■□□□□ 0.79
RHBDD3-207ENST00000496342 CIITAP33076 1130 aa19.96■□□□□ 0.79
RHBDD3-207ENST00000496342 INF2Q27J81 1249 aa19.96■□□□□ 0.79
RHBDD3-207ENST00000496342 TRIM71Q2Q1W2 868 aaKnown RBP19.96■□□□□ 0.79
RHBDD3-207ENST00000496342 EARS2Q5JPH6 523 aaKnown RBP19.96■□□□□ 0.79
RHBDD3-207ENST00000496342 MCTP2Q6DN12 878 aa19.96■□□□□ 0.79
RHBDD3-207ENST00000496342 FAM109BQ6ICB4 259 aaPredicted RBP19.96■□□□□ 0.79
RHBDD3-207ENST00000496342 ZBTB10Q96DT7 871 aa19.96■□□□□ 0.79
RHBDD3-207ENST00000496342 ZNF577Q9BSK1 485 aa19.96■□□□□ 0.79
RHBDD3-207ENST00000496342 ZNF215Q9UL58 517 aaPredicted RBP19.96■□□□□ 0.79
RHBDD3-207ENST00000496342 LIMCH1Q9UPQ0 1083 aa19.96■□□□□ 0.79
RHBDD3-207ENST00000496342 LAMA3Q16787 3333 aa19.95■□□□□ 0.78
RHBDD3-207ENST00000496342 IPO5O00410 1097 aaKnown RBP19.95■□□□□ 0.78
RHBDD3-207ENST00000496342 SLC34A2O95436 690 aa19.95■□□□□ 0.78
RHBDD3-207ENST00000496342 IQCF3P0C7M6 154 aa19.95■□□□□ 0.78
RHBDD3-207ENST00000496342 HOXC8P31273 242 aa19.95■□□□□ 0.78
RHBDD3-207ENST00000496342 Q7L0L9 218 aa19.95■□□□□ 0.78
RHBDD3-207ENST00000496342 LMBR1Q8WVP7 490 aa19.95■□□□□ 0.78
RHBDD3-207ENST00000496342 GLG1Q92896 1179 aa19.95■□□□□ 0.78
RHBDD3-207ENST00000496342 ATP6V0A1Q93050 837 aa19.95■□□□□ 0.78
RHBDD3-207ENST00000496342 CXXC1Q9P0U4 656 aaPredicted RBP19.95■□□□□ 0.78
RHBDD3-207ENST00000496342 EMSYQ7Z589 1322 aa19.95■□□□□ 0.78
RHBDD3-207ENST00000496342 MICAL3Q7RTP6 2002 aa19.94■□□□□ 0.78
RHBDD3-207ENST00000496342 PITPNM1O00562 1244 aa19.94■□□□□ 0.78
RHBDD3-207ENST00000496342 LGR5O75473 907 aa19.94■□□□□ 0.78
RHBDD3-207ENST00000496342 CD2BP2O95400 341 aaKnown RBP19.94■□□□□ 0.78
RHBDD3-207ENST00000496342 CKBP12277 381 aa19.94■□□□□ 0.78
RHBDD3-207ENST00000496342 SETQ01105 290 aaPredicted RBP19.94■□□□□ 0.78
RHBDD3-207ENST00000496342 NR5A1Q13285 461 aa19.94■□□□□ 0.78
RHBDD3-207ENST00000496342 PTK7Q13308 1070 aa19.94■□□□□ 0.78
RHBDD3-207ENST00000496342 BFSP2Q13515 415 aa19.94■□□□□ 0.78
RHBDD3-207ENST00000496342 NONOQ15233 471 aaKnown RBP eCLIP19.94■□□□□ 0.78
RHBDD3-207ENST00000496342 OTOP2Q7RTS6 562 aa19.94■□□□□ 0.78
RHBDD3-207ENST00000496342 RETREG2Q8NC44 543 aa19.94■□□□□ 0.78
RHBDD3-207ENST00000496342 GRXCR1A8MXD5 290 aa19.93■□□□□ 0.78
RHBDD3-207ENST00000496342 MSH4O15457 936 aa19.93■□□□□ 0.78
RHBDD3-207ENST00000496342 GPNMBQ14956 572 aa19.93■□□□□ 0.78
RHBDD3-207ENST00000496342 ZNF618Q5T7W0 954 aa19.93■□□□□ 0.78
RHBDD3-207ENST00000496342 PSRC1Q6PGN9 363 aaPredicted RBP19.93■□□□□ 0.78
RHBDD3-207ENST00000496342 TRAF7Q6Q0C0 670 aa19.93■□□□□ 0.78
RHBDD3-207ENST00000496342 PIK3AP1Q6ZUJ8 805 aa19.93■□□□□ 0.78
RHBDD3-207ENST00000496342 LRRC8DQ7L1W4 858 aa19.93■□□□□ 0.78
RHBDD3-207ENST00000496342 SERINC5Q86VE9 423 aa19.93■□□□□ 0.78
RHBDD3-207ENST00000496342 CCDC60Q8IWA6 550 aaPredicted RBP19.93■□□□□ 0.78
RHBDD3-207ENST00000496342 CAGE1Q8TC20 777 aa19.93■□□□□ 0.78
RHBDD3-207ENST00000496342 SELPP16109 830 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 IGBP1P78318 339 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 GUCY1B3Q02153 619 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 PPFIA1Q13136 1202 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 RABEP1Q15276 862 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 TCTN1Q2MV58 587 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 GALNT17Q6IS24 598 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 RUFY4Q6ZNE9 571 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 KRT25Q7Z3Z0 450 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 CCDC155Q8N6L0 562 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 TRAPPC12Q8WVT3 735 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 WASF1Q92558 559 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 TBC1D32Q96NH3 1257 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 OSBPL7Q9BZF2 842 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 SMARCAD1Q9H4L7 1026 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 ERAP1Q9NZ08 941 aa19.92■□□□□ 0.78
RHBDD3-207ENST00000496342 SZT2Q5T011 3432 aa19.91■□□□□ 0.78
RHBDD3-207ENST00000496342 CCDC194A0A1B0GVG4 234 aa19.91■□□□□ 0.78
RHBDD3-207ENST00000496342 SLC37A4O43826 429 aa19.91■□□□□ 0.78
RHBDD3-207ENST00000496342 NBNO60934 754 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms