RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 SIRPGQ9P1W8 387 aa5.61□□□□□ -1.51
CLK1-214ENST00000496205 TLDC2A0PJX2 215 aa5.6□□□□□ -1.51
CLK1-214ENST00000496205 PLSCR1O15162 318 aa5.6□□□□□ -1.51
CLK1-214ENST00000496205 KLHL18O94889 574 aa5.6□□□□□ -1.51
CLK1-214ENST00000496205 LCP1P13796 627 aa5.6□□□□□ -1.51
CLK1-214ENST00000496205 GTF2A2P52657 109 aa5.6□□□□□ -1.51
CLK1-214ENST00000496205 EMC4Q5J8M3 183 aa5.6□□□□□ -1.51
CLK1-214ENST00000496205 MIIPQ5JXC2 388 aa5.6□□□□□ -1.51
CLK1-214ENST00000496205 E4F1Q66K89 784 aaPredicted RBP5.6□□□□□ -1.51
CLK1-214ENST00000496205 ZNF662Q6ZS27 426 aa5.6□□□□□ -1.51
CLK1-214ENST00000496205 PROSER1Q86XN7 944 aa5.6□□□□□ -1.51
CLK1-214ENST00000496205 MKL1Q969V6 931 aa5.6□□□□□ -1.51
CLK1-214ENST00000496205 PPP1R14AQ96A00 147 aa5.6□□□□□ -1.51
CLK1-214ENST00000496205 ZNF503Q96F45 646 aa5.6□□□□□ -1.51
CLK1-214ENST00000496205 RNPC3Q96LT9 517 aaKnown RBP5.6□□□□□ -1.51
CLK1-214ENST00000496205 SRPK1Q96SB4 655 aaKnown RBP5.6□□□□□ -1.51
CLK1-214ENST00000496205 COA3Q9Y2R0 106 aaPredicted RBP5.6□□□□□ -1.51
CLK1-214ENST00000496205 SF1Q15637 639 aaKnown RBP5.59□□□□□ -1.51
CLK1-214ENST00000496205 RNF207Q6ZRF8 634 aa5.59□□□□□ -1.51
CLK1-214ENST00000496205 LILRB2Q8N423 598 aa5.59□□□□□ -1.51
CLK1-214ENST00000496205 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.59□□□□□ -1.51
CLK1-214ENST00000496205 CHFRQ96EP1 664 aa5.59□□□□□ -1.51
CLK1-214ENST00000496205 MYO1BO43795 1136 aa5.58□□□□□ -1.52
CLK1-214ENST00000496205 ECI1P42126 302 aa5.58□□□□□ -1.52
CLK1-214ENST00000496205 PRKD1Q15139 912 aaPredicted RBP5.58□□□□□ -1.52
CLK1-214ENST00000496205 CHRNA2Q15822 529 aa5.58□□□□□ -1.52
CLK1-214ENST00000496205 PRSS53Q2L4Q9 553 aa5.58□□□□□ -1.52
CLK1-214ENST00000496205 DENND5AQ6IQ26 1287 aa5.58□□□□□ -1.52
CLK1-214ENST00000496205 SDE2Q6IQ49 451 aa5.58□□□□□ -1.52
CLK1-214ENST00000496205 MRFAP1L1Q96HT8 127 aa5.58□□□□□ -1.52
CLK1-214ENST00000496205 WRNIP1Q96S55 665 aa5.58□□□□□ -1.52
CLK1-214ENST00000496205 ADOQ96SZ5 270 aa5.58□□□□□ -1.52
CLK1-214ENST00000496205 SEC61A2Q9H9S3 476 aa5.58□□□□□ -1.52
CLK1-214ENST00000496205 HSPBP1Q9NZL4 362 aa5.58□□□□□ -1.52
CLK1-214ENST00000496205 PCDHA2Q9Y5H9 948 aa5.58□□□□□ -1.52
CLK1-214ENST00000496205 H7BY64 318 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 MEFVO15553 781 aaPredicted RBP5.57□□□□□ -1.52
CLK1-214ENST00000496205 NARSO43776 548 aaKnown RBP5.57□□□□□ -1.52
CLK1-214ENST00000496205 DIAPH1O60610 1272 aaKnown RBP5.57□□□□□ -1.52
CLK1-214ENST00000496205 ZNF143P52747 638 aaPredicted RBP5.57□□□□□ -1.52
CLK1-214ENST00000496205 DGCR2P98153 550 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 KCNAB2Q13303 367 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 LSAMPQ13449 338 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 TESK1Q15569 626 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 NFE2L2Q16236 605 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 SMN1Q16637 294 aaKnown RBP5.57□□□□□ -1.52
CLK1-214ENST00000496205 NRN1LQ496H8 165 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 USP39Q53GS9 565 aaKnown RBP5.57□□□□□ -1.52
CLK1-214ENST00000496205 Q6ZUG5 572 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 SPATC1Q76KD6 591 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 GPR155Q7Z3F1 870 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 FAM178BQ8IXR5 827 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 EXTL1Q92935 676 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 CHAMP1Q96JM3 812 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 LRRC37BQ96QE4 947 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 LMF1Q96S06 567 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 DNAJC7Q99615 494 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 CCDC113Q9H0I3 377 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 MYOTQ9UBF9 498 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 ZFR2Q9UPR6 939 aaKnown RBP5.57□□□□□ -1.52
CLK1-214ENST00000496205 TMA7Q9Y2S6 64 aaKnown RBP5.57□□□□□ -1.52
CLK1-214ENST00000496205 R3HCC1Q9Y3T6 440 aaKnown RBP5.57□□□□□ -1.52
CLK1-214ENST00000496205 SLC4A7Q9Y6M7 1214 aa5.57□□□□□ -1.52
CLK1-214ENST00000496205 U2SURPO15042 1029 aaKnown RBP5.56□□□□□ -1.52
CLK1-214ENST00000496205 PDPK1O15530 556 aa5.56□□□□□ -1.52
CLK1-214ENST00000496205 DDAH1O94760 285 aa5.56□□□□□ -1.52
CLK1-214ENST00000496205 KNG1P01042 644 aa5.56□□□□□ -1.52
CLK1-214ENST00000496205 SCG5P05408 212 aa5.56□□□□□ -1.52
CLK1-214ENST00000496205 SNRPB2P08579 225 aaKnown RBP5.56□□□□□ -1.52
CLK1-214ENST00000496205 HOXC12P31275 282 aa5.56□□□□□ -1.52
CLK1-214ENST00000496205 CSF2RBP32927 897 aa5.56□□□□□ -1.52
CLK1-214ENST00000496205 FXNQ16595 210 aa5.56□□□□□ -1.52
CLK1-214ENST00000496205 HS1BP3Q53T59 392 aa5.56□□□□□ -1.52
CLK1-214ENST00000496205 RALYLQ86SE5 291 aaKnown RBP5.56□□□□□ -1.52
CLK1-214ENST00000496205 DTX3Q8N9I9 347 aa5.56□□□□□ -1.52
CLK1-214ENST00000496205 AJUBAQ96IF1 538 aa5.56□□□□□ -1.52
CLK1-214ENST00000496205 IKZF4Q9H2S9 585 aa5.56□□□□□ -1.52
CLK1-214ENST00000496205 CDIP1Q9H305 208 aa5.56□□□□□ -1.52
CLK1-214ENST00000496205 SMOC1Q9H4F8 434 aa5.56□□□□□ -1.52
CLK1-214ENST00000496205 CLDND1Q9NY35 253 aa5.56□□□□□ -1.52
CLK1-214ENST00000496205 ZNF202O95125 648 aa5.55□□□□□ -1.52
CLK1-214ENST00000496205 ITGAVP06756 1048 aa5.55□□□□□ -1.52
CLK1-214ENST00000496205 GRIN1Q05586 938 aa5.55□□□□□ -1.52
CLK1-214ENST00000496205 RASGRF1Q13972 1273 aa5.55□□□□□ -1.52
CLK1-214ENST00000496205 ACBD5Q5T8D3 534 aaPredicted RBP5.55□□□□□ -1.52
CLK1-214ENST00000496205 AGBL4Q5VU57 503 aa5.55□□□□□ -1.52
CLK1-214ENST00000496205 EGFLAMQ63HQ2 1017 aa5.55□□□□□ -1.52
CLK1-214ENST00000496205 LRP10Q7Z4F1 713 aa5.55□□□□□ -1.52
CLK1-214ENST00000496205 TAX1BP1Q86VP1 789 aa5.55□□□□□ -1.52
CLK1-214ENST00000496205 CLEC4DQ8WXI8 215 aa5.55□□□□□ -1.52
CLK1-214ENST00000496205 ASH2LQ9UBL3 628 aa5.55□□□□□ -1.52
CLK1-214ENST00000496205 PFDN2Q9UHV9 154 aa5.55□□□□□ -1.52
CLK1-214ENST00000496205 PTPN22Q9Y2R2 807 aa5.55□□□□□ -1.52
CLK1-214ENST00000496205 DGKIO75912 1065 aa5.54□□□□□ -1.52
CLK1-214ENST00000496205 CKMP06732 381 aa5.54□□□□□ -1.52
CLK1-214ENST00000496205 NAT2P11245 290 aa5.54□□□□□ -1.52
CLK1-214ENST00000496205 LTBRP36941 435 aa5.54□□□□□ -1.52
CLK1-214ENST00000496205 INHBEP58166 350 aa5.54□□□□□ -1.52
CLK1-214ENST00000496205 ABHD18Q0P651 414 aa5.54□□□□□ -1.52
CLK1-214ENST00000496205 SQSTM1Q13501 440 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms