RNA–Protein interactions for RNA: ENST00000496108.5

LYSMD4-209, Transcript of LysM domain containing 4, humanhuman

TSL 2

Gene LYSMD4, Length 2,222 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-209ENST00000496108 CDK5RAP3Q96JB5 506 aa22.49■■□□□ 1.19
LYSMD4-209ENST00000496108 MTMR9Q96QG7 549 aa22.49■■□□□ 1.19
LYSMD4-209ENST00000496108 KDM4CQ9H3R0 1056 aa22.49■■□□□ 1.19
LYSMD4-209ENST00000496108 CNOT10Q9H9A5 744 aaKnown RBP22.49■■□□□ 1.19
LYSMD4-209ENST00000496108 SWAP70Q9UH65 585 aa22.49■■□□□ 1.19
LYSMD4-209ENST00000496108 ROBO3Q96MS0 1386 aa22.48■■□□□ 1.19
LYSMD4-209ENST00000496108 COL4A1P02462 1669 aa22.48■■□□□ 1.19
LYSMD4-209ENST00000496108 ATP8B3O60423 1300 aa22.48■■□□□ 1.19
LYSMD4-209ENST00000496108 PGRMC1O00264 195 aaKnown RBP22.48■■□□□ 1.19
LYSMD4-209ENST00000496108 RNASE9P60153 205 aaKnown RBP22.48■■□□□ 1.19
LYSMD4-209ENST00000496108 SEPT2Q15019 361 aa22.48■■□□□ 1.19
LYSMD4-209ENST00000496108 SPRED3Q2MJR0 410 aa22.48■■□□□ 1.19
LYSMD4-209ENST00000496108 PAXIP1Q6ZW49 1069 aaPredicted RBP22.48■■□□□ 1.19
LYSMD4-209ENST00000496108 FAM228AQ86W67 206 aa22.48■■□□□ 1.19
LYSMD4-209ENST00000496108 N4BP2L2Q92802 583 aaPredicted RBP22.48■■□□□ 1.19
LYSMD4-209ENST00000496108 EZRP15311 586 aaKnown RBP22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 ASIC2Q16515 512 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 NBPF9Q3BBW0 867 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 FBXO33Q7Z6M2 555 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 NGLY1Q96IV0 654 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 PACSIN1Q9BY11 444 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 SLITRK6Q9H5Y7 841 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 HAUS2Q9NVX0 235 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 MCM9Q9NXL9 1143 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 FBXL5Q9UKA1 691 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 TPX2Q9ULW0 747 aaKnown RBP22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 AFF2P51816 1311 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 SMCO2A6NFE2 343 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 SART1O43290 800 aaKnown RBP22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 TMOD1P28289 359 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 RAPGEF1Q13905 1077 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 TMEM266Q2M3C6 531 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 ODF2Q5BJF6 829 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 SPDYCQ5MJ68 293 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 C12orf60Q5U649 245 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 TBCKQ8TEA7 893 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 SEC14L1Q92503 715 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 CCT6BQ92526 530 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 CENPTQ96BT3 561 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 NEUROG2Q9H2A3 272 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 BSDC1Q9NW68 430 aaPredicted RBP22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 CNOT8Q9UFF9 292 aaKnown RBP22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 ADAMTS1Q9UHI8 967 aa22.47■■□□□ 1.19
LYSMD4-209ENST00000496108 A0A0G2JS52 829 aa22.46■■□□□ 1.19
LYSMD4-209ENST00000496108 ZBTB48P10074 688 aaPredicted RBP22.46■■□□□ 1.19
LYSMD4-209ENST00000496108 TRIM59Q8IWR1 403 aa22.46■■□□□ 1.19
LYSMD4-209ENST00000496108 LRRC57Q8N9N7 239 aa22.46■■□□□ 1.19
LYSMD4-209ENST00000496108 DDX12PQ92771 950 aa22.46■■□□□ 1.19
LYSMD4-209ENST00000496108 MIEF2Q96C03 454 aa22.46■■□□□ 1.19
LYSMD4-209ENST00000496108 RAB34Q9BZG1 259 aa22.46■■□□□ 1.19
LYSMD4-209ENST00000496108 MAST2Q6P0Q8 1798 aa22.46■■□□□ 1.19
LYSMD4-209ENST00000496108 MGRN1O60291 552 aa22.46■■□□□ 1.19
LYSMD4-209ENST00000496108 GCFC2P16383 781 aaKnown RBP22.46■■□□□ 1.19
LYSMD4-209ENST00000496108 TXKP42681 527 aa22.46■■□□□ 1.19
LYSMD4-209ENST00000496108 TMC3Q7Z5M5 1100 aa22.46■■□□□ 1.19
LYSMD4-209ENST00000496108 GANQ9H2C0 597 aa22.46■■□□□ 1.19
LYSMD4-209ENST00000496108 ATP6V0A4Q9HBG4 840 aa22.46■■□□□ 1.19
LYSMD4-209ENST00000496108 NOVA2Q9UNW9 492 aaKnown RBP22.46■■□□□ 1.19
LYSMD4-209ENST00000496108 CEP104O60308 925 aa22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 CAMTA2O94983 1202 aa22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 PDHBP11177 359 aa22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 DRD4P21917 467 aa22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 PDIA5Q14554 519 aa22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 TMEM119Q4V9L6 283 aa22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 UBLCP1Q8WVY7 318 aaPredicted RBP22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 ESYT2A0FGR8 921 aa22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 TRAF5O00463 557 aa22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 ERCC3P19447 782 aa22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 EIF3BP55884 814 aaKnown RBP22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 CALCRLQ16602 461 aa22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 RASGEF1CQ8N431 466 aa22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 BCCIPQ9P287 314 aaKnown RBP eCLIP22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 NOC2LQ9Y3T9 749 aaKnown RBP22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.45■■□□□ 1.18
LYSMD4-209ENST00000496108 WTIPA6NIX2 430 aaPredicted RBP22.44■■□□□ 1.18
LYSMD4-209ENST00000496108 KLRF2D3W0D1 207 aa22.44■■□□□ 1.18
LYSMD4-209ENST00000496108 USP17L8P0C7I0 530 aa22.44■■□□□ 1.18
LYSMD4-209ENST00000496108 LRRC41Q15345 812 aa22.44■■□□□ 1.18
LYSMD4-209ENST00000496108 SOGA3Q5TF21 947 aa22.44■■□□□ 1.18
LYSMD4-209ENST00000496108 DDX42Q86XP3 938 aaKnown RBP eCLIP22.44■■□□□ 1.18
LYSMD4-209ENST00000496108 CEP57Q86XR8 500 aa22.44■■□□□ 1.18
LYSMD4-209ENST00000496108 FAM133AQ8N9E0 248 aa22.44■■□□□ 1.18
LYSMD4-209ENST00000496108 TLCD1Q96CP7 247 aa22.44■■□□□ 1.18
LYSMD4-209ENST00000496108 PSMD1Q99460 953 aa22.44■■□□□ 1.18
LYSMD4-209ENST00000496108 BZW2Q9Y6E2 419 aaKnown RBP22.44■■□□□ 1.18
LYSMD4-209ENST00000496108 ANXA13P27216 316 aa22.43■■□□□ 1.18
LYSMD4-209ENST00000496108 MAGOHP61326 146 aaKnown RBP22.43■■□□□ 1.18
LYSMD4-209ENST00000496108 CPLX4Q7Z7G2 160 aa22.43■■□□□ 1.18
LYSMD4-209ENST00000496108 GLIS3Q8NEA6 775 aa22.43■■□□□ 1.18
LYSMD4-209ENST00000496108 CCDC26Q8TAB7 109 aa22.43■■□□□ 1.18
LYSMD4-209ENST00000496108 MAGOHBQ96A72 148 aaKnown RBP22.43■■□□□ 1.18
LYSMD4-209ENST00000496108 HVCN1Q96D96 273 aa22.43■■□□□ 1.18
LYSMD4-209ENST00000496108 TMEM47Q9BQJ4 181 aa22.43■■□□□ 1.18
LYSMD4-209ENST00000496108 FAM114A2Q9NRY5 505 aa22.43■■□□□ 1.18
LYSMD4-209ENST00000496108 NIP7Q9Y221 180 aaKnown RBP eCLIP22.43■■□□□ 1.18
LYSMD4-209ENST00000496108 F8VZ95 297 aa22.43■■□□□ 1.18
LYSMD4-209ENST00000496108 TSPY3P0CV98 308 aa22.43■■□□□ 1.18
LYSMD4-209ENST00000496108 TSPY8P0CW00 308 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms