RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 RAG1P15918 1043 aa11.14□□□□□ -0.63
CALD1-223ENST00000496024 ATP2B1P20020 1258 aa11.14□□□□□ -0.63
CALD1-223ENST00000496024 MARK3P27448 753 aa11.14□□□□□ -0.63
CALD1-223ENST00000496024 GJB2P29033 226 aa11.14□□□□□ -0.63
CALD1-223ENST00000496024 ACTR2P61160 394 aa11.14□□□□□ -0.63
CALD1-223ENST00000496024 GNL2Q13823 731 aaKnown RBP11.14□□□□□ -0.63
CALD1-223ENST00000496024 NFRKBQ6P4R8 1299 aa11.14□□□□□ -0.63
CALD1-223ENST00000496024 NEK8Q86SG6 692 aa11.14□□□□□ -0.63
CALD1-223ENST00000496024 C7orf31Q8N865 590 aa11.14□□□□□ -0.63
CALD1-223ENST00000496024 GLG1Q92896 1179 aa11.14□□□□□ -0.63
CALD1-223ENST00000496024 LENG9Q96B70 501 aa11.14□□□□□ -0.63
CALD1-223ENST00000496024 TCEAL9Q9UHQ7 104 aa11.14□□□□□ -0.63
CALD1-223ENST00000496024 SMC3Q9UQE7 1217 aa11.14□□□□□ -0.63
CALD1-223ENST00000496024 HAS3O00219 553 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 KIAA0355O15063 1070 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 CHMP2AO43633 222 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 SLC37A4O43826 429 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 MARCH6O60337 910 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 CCNT1O60563 726 aaKnown RBP11.13□□□□□ -0.63
CALD1-223ENST00000496024 CCNE2O96020 404 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 ITGB8P26012 769 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 CYP2C18P33260 490 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 ZNF200P98182 395 aaPredicted RBP11.13□□□□□ -0.63
CALD1-223ENST00000496024 PTGISQ16647 500 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 GDF6Q6KF10 455 aaPredicted RBP11.13□□□□□ -0.63
CALD1-223ENST00000496024 FBXO18Q8NFZ0 1043 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 BADQ92934 168 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 TNFRSF25Q93038 417 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 SEZ6LQ9BYH1 1024 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 TBC1D22BQ9NU19 505 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 DDX25Q9UHL0 483 aaKnown RBP11.13□□□□□ -0.63
CALD1-223ENST00000496024 TBX21Q9UL17 535 aa11.13□□□□□ -0.63
CALD1-223ENST00000496024 ZNF215Q9UL58 517 aaPredicted RBP11.13□□□□□ -0.63
CALD1-223ENST00000496024 COLQQ9Y215 455 aaPredicted RBP11.13□□□□□ -0.63
CALD1-223ENST00000496024 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.13□□□□□ -0.63
CALD1-223ENST00000496024 MYH9P35579 1960 aaKnown RBP11.13□□□□□ -0.63
CALD1-223ENST00000496024 CYP3A7-CYP3A51PA0A087WV96 503 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 BACH1O14867 736 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 DHX15O43143 795 aaKnown RBP11.12□□□□□ -0.63
CALD1-223ENST00000496024 GAS7O60861 476 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 SMIM10L2AP0DMW4 78 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 SMIM10L2BP0DMW5 78 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 CYP3A7P24462 503 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 CCL23P55773 120 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 PTPN11Q06124 597 aaPredicted RBP11.12□□□□□ -0.63
CALD1-223ENST00000496024 Q4G0T1 1027 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 LRCH2Q5VUJ6 765 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 MCTP1Q6DN14 999 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 TRMT1LQ7Z2T5 733 aaKnown RBP11.12□□□□□ -0.63
CALD1-223ENST00000496024 PCYT2Q99447 389 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 TEKT3Q9BXF9 490 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 UBE2OQ9C0C9 1292 aaKnown RBP11.12□□□□□ -0.63
CALD1-223ENST00000496024 HIPK3Q9H422 1215 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 RNPEPQ9H4A4 650 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 AZI2Q9H6S1 392 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 SETD4Q9NVD3 440 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 GTF2IRD1Q9UHL9 959 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 KIF3AQ9Y496 699 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 SAMM50Q9Y512 469 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 LTBP2Q14767 1821 aa11.12□□□□□ -0.63
CALD1-223ENST00000496024 UMODL1Q5DID0 1318 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 C17orf102A2RUQ5 167 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 H3BQV1 296 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 TIMP1P01033 207 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 SUPT20HL2P0C7V6 817 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 GCFC2P16383 781 aaKnown RBP11.11□□□□□ -0.63
CALD1-223ENST00000496024 IGBP1P78318 339 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 HIC1Q14526 733 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 SWSAP1Q6NVH7 229 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 MOXD1Q6UVY6 613 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 ABHD15Q6UXT9 468 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 SLC5A5Q92911 643 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 MBOAT7Q96N66 472 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 GDF15Q99988 308 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 NOC4LQ9BVI4 516 aaKnown RBP11.11□□□□□ -0.63
CALD1-223ENST00000496024 UNC45AQ9H3U1 944 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 SMARCAD1Q9H4L7 1026 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 ERAP1Q9NZ08 941 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 WDR81Q562E7 1941 aa11.11□□□□□ -0.63
CALD1-223ENST00000496024 RANBP2P49792 3224 aaKnown RBP11.11□□□□□ -0.63
CALD1-223ENST00000496024 KIF28PB7ZC32 967 aa11.1□□□□□ -0.63
CALD1-223ENST00000496024 K7ELQ4 463 aaPredicted RBP11.1□□□□□ -0.63
CALD1-223ENST00000496024 WNT7AO00755 349 aa11.1□□□□□ -0.63
CALD1-223ENST00000496024 LGR5O75473 907 aa11.1□□□□□ -0.63
CALD1-223ENST00000496024 STAT5BP51692 787 aa11.1□□□□□ -0.63
CALD1-223ENST00000496024 KRT76Q01546 638 aa11.1□□□□□ -0.63
CALD1-223ENST00000496024 FPGSQ05932 587 aa11.1□□□□□ -0.63
CALD1-223ENST00000496024 PPFIA1Q13136 1202 aa11.1□□□□□ -0.63
CALD1-223ENST00000496024 CUL4AQ13619 759 aa11.1□□□□□ -0.63
CALD1-223ENST00000496024 FAM160B1Q5W0V3 765 aa11.1□□□□□ -0.63
CALD1-223ENST00000496024 PPP4R3AQ6IN85 833 aa11.1□□□□□ -0.63
CALD1-223ENST00000496024 ZNF746Q6NUN9 644 aaPredicted RBP11.1□□□□□ -0.63
CALD1-223ENST00000496024 MIS18BP1Q6P0N0 1132 aa11.1□□□□□ -0.63
CALD1-223ENST00000496024 PDXDC2PQ6P474 469 aa11.1□□□□□ -0.63
CALD1-223ENST00000496024 MIER3Q7Z3K6 550 aa11.1□□□□□ -0.63
CALD1-223ENST00000496024 SESTD1Q86VW0 696 aa11.1□□□□□ -0.63
CALD1-223ENST00000496024 CCDC60Q8IWA6 550 aaPredicted RBP11.1□□□□□ -0.63
CALD1-223ENST00000496024 CKAP2LQ8IYA6 745 aa11.1□□□□□ -0.63
CALD1-223ENST00000496024 ETNPPLQ8TBG4 499 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms