RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 HTRA3P83110 453 aa8.09□□□□□ -1.11
CCDC39-207ENST00000495817 ZNF460Q14592 562 aa8.09□□□□□ -1.11
CCDC39-207ENST00000495817 DHCR24Q15392 516 aa8.09□□□□□ -1.11
CCDC39-207ENST00000495817 OTOP3Q7RTS5 596 aa8.09□□□□□ -1.11
CCDC39-207ENST00000495817 DDX42Q86XP3 938 aaKnown RBP eCLIP8.09□□□□□ -1.11
CCDC39-207ENST00000495817 UBR7Q8N806 425 aa8.09□□□□□ -1.11
CCDC39-207ENST00000495817 PRPF38AQ8NAV1 312 aaKnown RBP8.09□□□□□ -1.11
CCDC39-207ENST00000495817 TTLL11Q8NHH1 800 aa8.09□□□□□ -1.11
CCDC39-207ENST00000495817 SMARCC2Q8TAQ2 1214 aa8.09□□□□□ -1.11
CCDC39-207ENST00000495817 PANK1Q8TE04 598 aa8.09□□□□□ -1.11
CCDC39-207ENST00000495817 DDX11Q96FC9 970 aa8.09□□□□□ -1.11
CCDC39-207ENST00000495817 YIPF4Q9BSR8 244 aa8.09□□□□□ -1.11
CCDC39-207ENST00000495817 MTFR1LQ9H019 292 aa8.09□□□□□ -1.11
CCDC39-207ENST00000495817 PPARGC1AQ9UBK2 798 aaKnown RBP8.09□□□□□ -1.11
CCDC39-207ENST00000495817 PMF1-BGLAPU3KQ54 211 aa8.09□□□□□ -1.11
CCDC39-207ENST00000495817 TCRBV5S2A0A599 114 aa8.08□□□□□ -1.12
CCDC39-207ENST00000495817 JMJD7P0C870 316 aa8.08□□□□□ -1.12
CCDC39-207ENST00000495817 GNAT1P11488 350 aa8.08□□□□□ -1.12
CCDC39-207ENST00000495817 CFAP100Q494V2 611 aa8.08□□□□□ -1.12
CCDC39-207ENST00000495817 HABP4Q5JVS0 413 aaKnown RBP8.08□□□□□ -1.12
CCDC39-207ENST00000495817 ZCCHC8Q6NZY4 707 aaKnown RBP8.08□□□□□ -1.12
CCDC39-207ENST00000495817 KIF18BQ86Y91 864 aa8.08□□□□□ -1.12
CCDC39-207ENST00000495817 UHMK1Q8TAS1 419 aaKnown RBP8.08□□□□□ -1.12
CCDC39-207ENST00000495817 PIP4K2CQ8TBX8 421 aa8.08□□□□□ -1.12
CCDC39-207ENST00000495817 LEO1Q8WVC0 666 aaPredicted RBP8.08□□□□□ -1.12
CCDC39-207ENST00000495817 STAG1Q8WVM7 1258 aa8.08□□□□□ -1.12
CCDC39-207ENST00000495817 JAM3Q9BX67 310 aa8.08□□□□□ -1.12
CCDC39-207ENST00000495817 FAM126AQ9BYI3 521 aaPredicted RBP8.08□□□□□ -1.12
CCDC39-207ENST00000495817 PCDHA8Q9Y5H6 950 aa8.08□□□□□ -1.12
CCDC39-207ENST00000495817 ALG1L2C9J202 215 aa8.07□□□□□ -1.12
CCDC39-207ENST00000495817 EYA4O95677 639 aa8.07□□□□□ -1.12
CCDC39-207ENST00000495817 C8BP07358 591 aa8.07□□□□□ -1.12
CCDC39-207ENST00000495817 KCNA6P17658 529 aa8.07□□□□□ -1.12
CCDC39-207ENST00000495817 PCBP1Q15365 356 aaKnown RBP eCLIP8.07□□□□□ -1.12
CCDC39-207ENST00000495817 CDCA2Q69YH5 1023 aaPredicted RBP8.07□□□□□ -1.12
CCDC39-207ENST00000495817 SPOCD1Q6ZMY3 1216 aa8.07□□□□□ -1.12
CCDC39-207ENST00000495817 LCNL1Q6ZST4 164 aa8.07□□□□□ -1.12
CCDC39-207ENST00000495817 DDX53Q86TM3 631 aaKnown RBP8.07□□□□□ -1.12
CCDC39-207ENST00000495817 KRTAP1-3Q8IUG1 177 aa8.07□□□□□ -1.12
CCDC39-207ENST00000495817 PDGFDQ9GZP0 370 aaPredicted RBP8.07□□□□□ -1.12
CCDC39-207ENST00000495817 HOMER2Q9NSB8 354 aa8.07□□□□□ -1.12
CCDC39-207ENST00000495817 DTLQ9NZJ0 730 aa8.07□□□□□ -1.12
CCDC39-207ENST00000495817 ASH2LQ9UBL3 628 aa8.07□□□□□ -1.12
CCDC39-207ENST00000495817 PDGFRBP09619 1106 aa8.06□□□□□ -1.12
CCDC39-207ENST00000495817 CDKN1CP49918 316 aaPredicted RBP8.06□□□□□ -1.12
CCDC39-207ENST00000495817 NKX3-2P78367 333 aa8.06□□□□□ -1.12
CCDC39-207ENST00000495817 PLEKHG6Q3KR16 790 aa8.06□□□□□ -1.12
CCDC39-207ENST00000495817 PKN3Q6P5Z2 889 aa8.06□□□□□ -1.12
CCDC39-207ENST00000495817 LINC01356Q8N9X3 169 aa8.06□□□□□ -1.12
CCDC39-207ENST00000495817 FNIP1Q8TF40 1166 aa8.06□□□□□ -1.12
CCDC39-207ENST00000495817 TOE1Q96GM8 510 aaKnown RBP8.06□□□□□ -1.12
CCDC39-207ENST00000495817 HSPBP1Q9NZL4 362 aa8.06□□□□□ -1.12
CCDC39-207ENST00000495817 BTBD11A6QL63 1104 aa8.05□□□□□ -1.12
CCDC39-207ENST00000495817 GSTA4O15217 222 aa8.05□□□□□ -1.12
CCDC39-207ENST00000495817 PLA2G1BP04054 148 aaKnown RBP8.05□□□□□ -1.12
CCDC39-207ENST00000495817 SAPCD2Q86UD0 394 aa8.05□□□□□ -1.12
CCDC39-207ENST00000495817 FERMT3Q86UX7 667 aa8.05□□□□□ -1.12
CCDC39-207ENST00000495817 LINC00482Q8N8I6 264 aa8.05□□□□□ -1.12
CCDC39-207ENST00000495817 ARRDC4Q8NCT1 418 aa8.05□□□□□ -1.12
CCDC39-207ENST00000495817 ATL2Q8NHH9 583 aa8.05□□□□□ -1.12
CCDC39-207ENST00000495817 PCDH19Q8TAB3 1148 aa8.05□□□□□ -1.12
CCDC39-207ENST00000495817 WNK4Q96J92 1243 aa8.05□□□□□ -1.12
CCDC39-207ENST00000495817 IPPKQ9H8X2 491 aa8.05□□□□□ -1.12
CCDC39-207ENST00000495817 SAMD15Q9P1V8 674 aa8.05□□□□□ -1.12
CCDC39-207ENST00000495817 KPNA6O60684 536 aa8.04□□□□□ -1.12
CCDC39-207ENST00000495817 SEPT7Q16181 437 aaKnown RBP8.04□□□□□ -1.12
CCDC39-207ENST00000495817 FAM47CQ5HY64 1035 aa8.04□□□□□ -1.12
CCDC39-207ENST00000495817 PIK3R6Q5UE93 754 aa8.04□□□□□ -1.12
CCDC39-207ENST00000495817 ABHD17CQ6PCB6 329 aa8.04□□□□□ -1.12
CCDC39-207ENST00000495817 CD300LDQ6UXZ3 194 aa8.04□□□□□ -1.12
CCDC39-207ENST00000495817 STRA8Q7Z7C7 330 aa8.04□□□□□ -1.12
CCDC39-207ENST00000495817 ZC3H7AQ8IWR0 971 aaKnown RBP8.04□□□□□ -1.12
CCDC39-207ENST00000495817 FBXW5Q969U6 566 aa8.04□□□□□ -1.12
CCDC39-207ENST00000495817 KCNJ15Q99712 375 aa8.04□□□□□ -1.12
CCDC39-207ENST00000495817 CELF4Q9BZC1 486 aaKnown RBP8.04□□□□□ -1.12
CCDC39-207ENST00000495817 SH3D21A4FU49 640 aa8.03□□□□□ -1.12
CCDC39-207ENST00000495817 BRINP1O60477 761 aa8.03□□□□□ -1.12
CCDC39-207ENST00000495817 CKMP06732 381 aa8.03□□□□□ -1.12
CCDC39-207ENST00000495817 CR1LQ2VPA4 569 aa8.03□□□□□ -1.12
CCDC39-207ENST00000495817 VWA3BQ502W6 1294 aa8.03□□□□□ -1.12
CCDC39-207ENST00000495817 SP8Q8IXZ3 490 aa8.03□□□□□ -1.12
CCDC39-207ENST00000495817 TTLL6Q8N841 843 aa8.03□□□□□ -1.12
CCDC39-207ENST00000495817 OR2W6PQ8NHA6 318 aa8.03□□□□□ -1.12
CCDC39-207ENST00000495817 GORASP1Q9BQQ3 440 aa8.03□□□□□ -1.12
CCDC39-207ENST00000495817 DSEQ9UL01 958 aa8.03□□□□□ -1.12
CCDC39-207ENST00000495817 CBX4O00257 560 aa8.02□□□□□ -1.13
CCDC39-207ENST00000495817 ZEB2O60315 1214 aa8.02□□□□□ -1.13
CCDC39-207ENST00000495817 SCNN1BP51168 640 aa8.02□□□□□ -1.13
CCDC39-207ENST00000495817 EPHA5P54756 1037 aa8.02□□□□□ -1.13
CCDC39-207ENST00000495817 EXOSC10Q01780 885 aaKnown RBP8.02□□□□□ -1.13
CCDC39-207ENST00000495817 STRN3Q13033 797 aa8.02□□□□□ -1.13
CCDC39-207ENST00000495817 TEPPQ6URK8 271 aa8.02□□□□□ -1.13
CCDC39-207ENST00000495817 C16orf59Q7L2K0 433 aa8.02□□□□□ -1.13
CCDC39-207ENST00000495817 NECAB2Q7Z6G3 386 aa8.02□□□□□ -1.13
CCDC39-207ENST00000495817 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.02□□□□□ -1.13
CCDC39-207ENST00000495817 IGSF22Q8N9C0 903 aa8.02□□□□□ -1.13
CCDC39-207ENST00000495817 KYQ8NBH2 561 aa8.02□□□□□ -1.13
CCDC39-207ENST00000495817 WRNIP1Q96S55 665 aa8.02□□□□□ -1.13
CCDC39-207ENST00000495817 CEP89Q96ST8 783 aa8.02□□□□□ -1.13
CCDC39-207ENST00000495817 C11orf84Q9BUA3 381 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms