RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 SLC37A4O43826 429 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 EDIL3O43854 480 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 NEMFO60524 1076 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 F2P00734 622 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 TLE2Q04725 743 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 MFSD10Q14728 455 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 KIAA0753Q2KHM9 967 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 ZNF746Q6NUN9 644 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 MIS18BP1Q6P0N0 1132 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 NFRKBQ6P4R8 1299 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 ANKRD33Q7Z3H0 272 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 SMAP1Q8IYB5 467 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 SLFN12Q8IYM2 578 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 SLC5A5Q92911 643 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 FAM20AQ96MK3 541 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 MBOAT7Q96N66 472 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 TOX2Q96NM4 488 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 SMARCAD1Q9H4L7 1026 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 PRDM5Q9NQX1 630 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 ERAP1Q9NZ08 941 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 NOD1Q9Y239 953 aa13.66□□□□□ -0.22
CSNK1E-213ENST00000495232 GSTTP1A0A1W2PQM5 241 aa13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 WDR64B1ANS9 1081 aa13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 BACH1O14867 736 aa13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 TBX3O15119 743 aa13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 DHX15O43143 795 aaKnown RBP13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 CHMP2AO43633 222 aa13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 MCM7P33993 719 aa13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 TRAPPC10P48553 1259 aa13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 CDK7P50613 346 aa13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 PTPN11Q06124 597 aaPredicted RBP13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 CALCRLQ16602 461 aa13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 FAM160B1Q5W0V3 765 aa13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 POTEDQ86YR6 584 aa13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 SLC43A3Q8NBI5 491 aa13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 KAT2BQ92831 832 aa13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 TNPO1Q92973 898 aaKnown RBP13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 C16orf70Q9BSU1 422 aa13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 TMEM39AQ9NV64 488 aa13.65□□□□□ -0.22
CSNK1E-213ENST00000495232 GRIN2DO15399 1336 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 ALPK3Q96L96 1907 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 KIF28PB7ZC32 967 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 PSAPP07602 524 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 CLTBP09497 229 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 SUPT20HL2P0C7V6 817 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 SYT1P21579 422 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 SFNP31947 248 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 JAK3P52333 1124 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 ORC2Q13416 577 aaPredicted RBP13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 TTC38Q5R3I4 469 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 TRIM50Q86XT4 487 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 SPRYD3Q8NCJ5 442 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 ETNPPLQ8TBG4 499 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 KCNMB3Q9NPA1 279 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 TELO2Q9Y4R8 837 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 PCDHA10Q9Y5I2 948 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 EMSYQ7Z589 1322 aa13.64□□□□□ -0.23
CSNK1E-213ENST00000495232 SCN10AQ9Y5Y9 1956 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 HAS3O00219 553 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 LGR5O75473 907 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 PSMD10O75832 226 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 ATG7O95352 703 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 CCNE2O96020 404 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 GNAT1P11488 350 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 PDIA4P13667 645 aaKnown RBP13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 MARK3P27448 753 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 SLC26A2P50443 739 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 STAT5BP51692 787 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 ZNF174Q15697 407 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 RILPL1Q5EBL4 403 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 SWSAP1Q6NVH7 229 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 ABHD15Q6UXT9 468 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 PLPPR4Q7Z2D5 763 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 MIER3Q7Z3K6 550 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 BRAPQ7Z569 592 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 FAM126BQ8IXS8 530 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 CKAP2LQ8IYA6 745 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 PPP1R13LQ8WUF5 828 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 GJA10Q969M2 543 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 UNC45AQ9H3U1 944 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 ZNF302Q9NR11 478 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 DISC1Q9NRI5 854 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 HDAC6Q9UBN7 1215 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 PCDHA12Q9UN75 941 aa13.63□□□□□ -0.23
CSNK1E-213ENST00000495232 STX6O43752 255 aa13.62□□□□□ -0.23
CSNK1E-213ENST00000495232 B4GALT4O60513 344 aa13.62□□□□□ -0.23
CSNK1E-213ENST00000495232 SYN1P17600 705 aa13.62□□□□□ -0.23
CSNK1E-213ENST00000495232 FAAP100Q0VG06 881 aa13.62□□□□□ -0.23
CSNK1E-213ENST00000495232 PTGISQ16647 500 aa13.62□□□□□ -0.23
CSNK1E-213ENST00000495232 PDXDC2PQ6P474 469 aa13.62□□□□□ -0.23
CSNK1E-213ENST00000495232 SESTD1Q86VW0 696 aa13.62□□□□□ -0.23
CSNK1E-213ENST00000495232 RDM1Q8NG50 284 aa13.62□□□□□ -0.23
CSNK1E-213ENST00000495232 LBHD1Q9BQE6 289 aaPredicted RBP13.62□□□□□ -0.23
CSNK1E-213ENST00000495232 TRPV6Q9H1D0 765 aa13.62□□□□□ -0.23
CSNK1E-213ENST00000495232 TRMT13Q9NUP7 481 aaKnown RBP13.62□□□□□ -0.23
CSNK1E-213ENST00000495232 GTF2IRD1Q9UHL9 959 aa13.62□□□□□ -0.23
CSNK1E-213ENST00000495232 ZMYND8Q9ULU4 1186 aaPredicted RBP13.62□□□□□ -0.23
CSNK1E-213ENST00000495232 TRPC6Q9Y210 931 aa13.62□□□□□ -0.23
CSNK1E-213ENST00000495232 C17orf102A2RUQ5 167 aa13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 H0YGN5 161 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms