RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 LRCH2Q5VUJ6 765 aa12.47□□□□□ -0.41
KDM1A-205ENST00000494920 ZNF746Q6NUN9 644 aaPredicted RBP12.47□□□□□ -0.41
KDM1A-205ENST00000494920 ABHD15Q6UXT9 468 aa12.47□□□□□ -0.41
KDM1A-205ENST00000494920 PIAS4Q8N2W9 510 aaPredicted RBP12.47□□□□□ -0.41
KDM1A-205ENST00000494920 SDF4Q9BRK5 362 aa12.47□□□□□ -0.41
KDM1A-205ENST00000494920 C16orf70Q9BSU1 422 aa12.47□□□□□ -0.41
KDM1A-205ENST00000494920 FTOQ9C0B1 505 aaKnown RBP eCLIP12.47□□□□□ -0.41
KDM1A-205ENST00000494920 UNC45AQ9H3U1 944 aa12.47□□□□□ -0.41
KDM1A-205ENST00000494920 MLXIPQ9HAP2 919 aa12.47□□□□□ -0.41
KDM1A-205ENST00000494920 SPC25Q9HBM1 224 aa12.47□□□□□ -0.41
KDM1A-205ENST00000494920 KAT6AQ92794 2004 aa12.47□□□□□ -0.41
KDM1A-205ENST00000494920 IGSF9BQ9UPX0 1349 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 A0A1W2PQ45 241 aaPredicted RBP12.46□□□□□ -0.41
KDM1A-205ENST00000494920 A0A1W2PQY0 241 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 CCDC85CA6NKD9 419 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 EML1O00423 815 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 GAS7O60861 476 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 LGALS2P05162 132 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 OR52Z1P0C646 297 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 KRT76Q01546 638 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 PTGDRQ13258 359 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 IL17AQ16552 155 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 CALCRLQ16602 461 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 DGKDQ16760 1214 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 SMAP1Q8IYB5 467 aaPredicted RBP12.46□□□□□ -0.41
KDM1A-205ENST00000494920 SLFN12Q8IYM2 578 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 SLC43A3Q8NBI5 491 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 PCSK9Q8NBP7 692 aaKnown RBP12.46□□□□□ -0.41
KDM1A-205ENST00000494920 RDM1Q8NG50 284 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 SEPT1Q8WYJ6 367 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 USP28Q96RU2 1077 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 POLR3EQ9NVU0 708 aa12.46□□□□□ -0.41
KDM1A-205ENST00000494920 LAMA2P24043 3122 aaKnown RBP12.45□□□□□ -0.42
KDM1A-205ENST00000494920 KBTBD13C9JR72 458 aa12.45□□□□□ -0.42
KDM1A-205ENST00000494920 DDX39AO00148 427 aaKnown RBP12.45□□□□□ -0.42
KDM1A-205ENST00000494920 LAD1O00515 517 aa12.45□□□□□ -0.42
KDM1A-205ENST00000494920 KPNA6O60684 536 aa12.45□□□□□ -0.42
KDM1A-205ENST00000494920 SUPT20HL2P0C7V6 817 aa12.45□□□□□ -0.42
KDM1A-205ENST00000494920 ZNF286BP0CG31 522 aa12.45□□□□□ -0.42
KDM1A-205ENST00000494920 HOXC8P31273 242 aa12.45□□□□□ -0.42
KDM1A-205ENST00000494920 TCF7P36402 384 aaPredicted RBP12.45□□□□□ -0.42
KDM1A-205ENST00000494920 PRPHP41219 470 aa12.45□□□□□ -0.42
KDM1A-205ENST00000494920 NASPP49321 788 aaPredicted RBP12.45□□□□□ -0.42
KDM1A-205ENST00000494920 FXR2P51116 673 aaKnown RBP eCLIP12.45□□□□□ -0.422e-7■□□□□ 11.3
KDM1A-205ENST00000494920 C1orf53Q5VUE5 145 aa12.45□□□□□ -0.42
KDM1A-205ENST00000494920 CXCL17Q6UXB2 119 aa12.45□□□□□ -0.42
KDM1A-205ENST00000494920 TRIM50Q86XT4 487 aa12.45□□□□□ -0.42
KDM1A-205ENST00000494920 CCDC60Q8IWA6 550 aaPredicted RBP12.45□□□□□ -0.42
KDM1A-205ENST00000494920 AFAP1L1Q8TED9 768 aa12.45□□□□□ -0.42
KDM1A-205ENST00000494920 PAWRQ96IZ0 340 aaKnown RBP12.45□□□□□ -0.42
KDM1A-205ENST00000494920 TEKT3Q9BXF9 490 aa12.45□□□□□ -0.42
KDM1A-205ENST00000494920 CIZ1Q9ULV3 898 aaPredicted RBP12.45□□□□□ -0.42
KDM1A-205ENST00000494920 CLIC4Q9Y696 253 aa12.45□□□□□ -0.42
KDM1A-205ENST00000494920 ARID2Q68CP9 1835 aa12.45□□□□□ -0.42
KDM1A-205ENST00000494920 WDR64B1ANS9 1081 aa12.44□□□□□ -0.42
KDM1A-205ENST00000494920 NOP56O00567 594 aaKnown RBP12.44□□□□□ -0.42
KDM1A-205ENST00000494920 ZEB2O60315 1214 aa12.44□□□□□ -0.42
KDM1A-205ENST00000494920 CABYRO75952 493 aa12.44□□□□□ -0.42
KDM1A-205ENST00000494920 ATP4AP20648 1035 aa12.44□□□□□ -0.42
KDM1A-205ENST00000494920 SFNP31947 248 aa12.44□□□□□ -0.42
KDM1A-205ENST00000494920 SP4Q02446 784 aa12.44□□□□□ -0.42
KDM1A-205ENST00000494920 SF3A1Q15459 793 aaKnown RBP12.44□□□□□ -0.42
KDM1A-205ENST00000494920 BRDTQ58F21 947 aaPredicted RBP12.44□□□□□ -0.42
KDM1A-205ENST00000494920 FOXD4L5Q5VV16 416 aaPredicted RBP12.44□□□□□ -0.42
KDM1A-205ENST00000494920 IGSF22Q8N9C0 903 aa12.44□□□□□ -0.42
KDM1A-205ENST00000494920 FOXD4L4Q8WXT5 416 aaPredicted RBP12.44□□□□□ -0.42
KDM1A-205ENST00000494920 MTG1Q9BT17 334 aaPredicted RBP12.44□□□□□ -0.42
KDM1A-205ENST00000494920 DISC1Q9NRI5 854 aa12.44□□□□□ -0.42
KDM1A-205ENST00000494920 ZNF862O60290 1169 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 STBD1O95210 358 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 BMP15O95972 392 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 MYL3P08590 195 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 RGS19P49795 217 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 CDK7P50613 346 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 JAK3P52333 1124 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 NUCB2P80303 420 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 UGCGQ16739 394 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 ARL6IP4Q66PJ3 421 aaKnown RBP12.43□□□□□ -0.42
KDM1A-205ENST00000494920 PPP4R3CPQ6ZMV5 832 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 PLPPR4Q7Z2D5 763 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 NECAB2Q7Z6G3 386 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 SESTD1Q86VW0 696 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 FERMT2Q96AC1 680 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 CHAMP1Q96JM3 812 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 IPO9Q96P70 1041 aaKnown RBP12.43□□□□□ -0.42
KDM1A-205ENST00000494920 HSD17B14Q9BPX1 270 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 C11orf49Q9H6J7 331 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 TTC12Q9H892 705 aaPredicted RBP12.43□□□□□ -0.42
KDM1A-205ENST00000494920 PCDHA12Q9UN75 941 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 PCDHA10Q9Y5I2 948 aa12.43□□□□□ -0.42
KDM1A-205ENST00000494920 MAFBQ9Y5Q3 323 aaPredicted RBP12.43□□□□□ -0.42
KDM1A-205ENST00000494920 POTEMA6NI47 508 aa12.42□□□□□ -0.42
KDM1A-205ENST00000494920 H3BRB1 525 aa12.42□□□□□ -0.42
KDM1A-205ENST00000494920 CHMP2AO43633 222 aa12.42□□□□□ -0.42
KDM1A-205ENST00000494920 BAG4O95429 457 aaKnown RBP12.42□□□□□ -0.42
KDM1A-205ENST00000494920 TXKP42681 527 aa12.42□□□□□ -0.42
KDM1A-205ENST00000494920 PSEN2P49810 448 aa12.42□□□□□ -0.42
KDM1A-205ENST00000494920 PSMC6P62333 389 aa12.42□□□□□ -0.42
KDM1A-205ENST00000494920 GRIN1Q05586 938 aa12.42□□□□□ -0.42
KDM1A-205ENST00000494920 HIC1Q14526 733 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms