RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 SELPP16109 830 aa20.06■□□□□ 0.8
HDAC4-211ENST00000494800 LRRC8DQ7L1W4 858 aa20.06■□□□□ 0.8
HDAC4-211ENST00000494800 DEFB128Q7Z7B8 93 aa20.06■□□□□ 0.8
HDAC4-211ENST00000494800 TRIM50Q86XT4 487 aa20.06■□□□□ 0.8
HDAC4-211ENST00000494800 DEFB123Q8N688 67 aa20.06■□□□□ 0.8
HDAC4-211ENST00000494800 FTOQ9C0B1 505 aaKnown RBP eCLIP20.06■□□□□ 0.8
HDAC4-211ENST00000494800 GSTTP1A0A1W2PQM5 241 aa20.05■□□□□ 0.8
HDAC4-211ENST00000494800 FAM86B1E9PN63 330 aa20.05■□□□□ 0.8
HDAC4-211ENST00000494800 FAM86B2P0C5J1 330 aa20.05■□□□□ 0.8
HDAC4-211ENST00000494800 RBL2Q08999 1139 aa20.05■□□□□ 0.8
HDAC4-211ENST00000494800 C8orf34Q49A92 452 aa20.05■□□□□ 0.8
HDAC4-211ENST00000494800 ZNF697Q5TEC3 545 aa20.05■□□□□ 0.8
HDAC4-211ENST00000494800 FAM109BQ6ICB4 259 aaPredicted RBP20.05■□□□□ 0.8
HDAC4-211ENST00000494800 OTOP2Q7RTS6 562 aa20.05■□□□□ 0.8
HDAC4-211ENST00000494800 BLIDQ8IZY5 108 aa20.05■□□□□ 0.8
HDAC4-211ENST00000494800 RASGRP4Q8TDF6 673 aa20.05■□□□□ 0.8
HDAC4-211ENST00000494800 CRYGNQ8WXF5 182 aa20.05■□□□□ 0.8
HDAC4-211ENST00000494800 ZNF577Q9BSK1 485 aa20.05■□□□□ 0.8
HDAC4-211ENST00000494800 RNPEPQ9H4A4 650 aa20.05■□□□□ 0.8
HDAC4-211ENST00000494800 UPF2Q9HAU5 1272 aaKnown RBP20.05■□□□□ 0.8
HDAC4-211ENST00000494800 TBC1D22BQ9NU19 505 aa20.05■□□□□ 0.8
HDAC4-211ENST00000494800 EMSYQ7Z589 1322 aa20.04■□□□□ 0.8
HDAC4-211ENST00000494800 NRCAMQ92823 1304 aa20.04■□□□□ 0.8
HDAC4-211ENST00000494800 ZBBXA8MT70 800 aa20.04■□□□□ 0.8
HDAC4-211ENST00000494800 IPO5O00410 1097 aaKnown RBP20.04■□□□□ 0.8
HDAC4-211ENST00000494800 CKBP12277 381 aa20.04■□□□□ 0.8
HDAC4-211ENST00000494800 USP11P51784 963 aa20.04■□□□□ 0.8
HDAC4-211ENST00000494800 ACTR2P61160 394 aa20.04■□□□□ 0.8
HDAC4-211ENST00000494800 RASIP1Q5U651 963 aa20.04■□□□□ 0.8
HDAC4-211ENST00000494800 SERINC5Q86VE9 423 aa20.04■□□□□ 0.8
HDAC4-211ENST00000494800 DAGLBQ8NCG7 672 aa20.04■□□□□ 0.8
HDAC4-211ENST00000494800 GTF3C6Q969F1 213 aa20.04■□□□□ 0.8
HDAC4-211ENST00000494800 CTAGE1Q96RT6 745 aa20.04■□□□□ 0.8
HDAC4-211ENST00000494800 IGLV3-22A0A075B6J6 115 aa20.03■□□□□ 0.8
HDAC4-211ENST00000494800 HOXC8P31273 242 aa20.03■□□□□ 0.8
HDAC4-211ENST00000494800 CIITAP33076 1130 aa20.03■□□□□ 0.8
HDAC4-211ENST00000494800 THPOP40225 353 aa20.03■□□□□ 0.8
HDAC4-211ENST00000494800 ZNF200P98182 395 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-211ENST00000494800 ITGB3BPQ13352 177 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-211ENST00000494800 ME3Q16798 604 aa20.03■□□□□ 0.8
HDAC4-211ENST00000494800 PRR16Q569H4 304 aa20.03■□□□□ 0.8
HDAC4-211ENST00000494800 DHX38Q92620 1227 aaKnown RBP20.03■□□□□ 0.8
HDAC4-211ENST00000494800 SETD4Q9NVD3 440 aa20.03■□□□□ 0.8
HDAC4-211ENST00000494800 ORC3Q9UBD5 711 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-211ENST00000494800 TELO2Q9Y4R8 837 aa20.03■□□□□ 0.8
HDAC4-211ENST00000494800 SLC4A7Q9Y6M7 1214 aa20.03■□□□□ 0.8
HDAC4-211ENST00000494800 DDX39AO00148 427 aaKnown RBP20.02■□□□□ 0.8
HDAC4-211ENST00000494800 ADAMTS3O15072 1205 aa20.02■□□□□ 0.8
HDAC4-211ENST00000494800 CAND2O75155 1236 aa20.02■□□□□ 0.8
HDAC4-211ENST00000494800 MARK3P27448 753 aa20.02■□□□□ 0.8
HDAC4-211ENST00000494800 SLC26A2P50443 739 aa20.02■□□□□ 0.8
HDAC4-211ENST00000494800 PPFIA1Q13136 1202 aa20.02■□□□□ 0.8
HDAC4-211ENST00000494800 FAM160B1Q5W0V3 765 aa20.02■□□□□ 0.8
HDAC4-211ENST00000494800 KRT25Q7Z3Z0 450 aa20.02■□□□□ 0.8
HDAC4-211ENST00000494800 NECAB1Q8N987 351 aa20.02■□□□□ 0.8
HDAC4-211ENST00000494800 TBCKQ8TEA7 893 aa20.02■□□□□ 0.8
HDAC4-211ENST00000494800 BRMS1Q9HCU9 246 aa20.02■□□□□ 0.8
HDAC4-211ENST00000494800 TMEM265A0A087WTH1 108 aa20.01■□□□□ 0.79
HDAC4-211ENST00000494800 CCDC194A0A1B0GVG4 234 aa20.01■□□□□ 0.79
HDAC4-211ENST00000494800 BACH1O14867 736 aa20.01■□□□□ 0.79
HDAC4-211ENST00000494800 TREHO43280 583 aa20.01■□□□□ 0.79
HDAC4-211ENST00000494800 LGR5O75473 907 aa20.01■□□□□ 0.79
HDAC4-211ENST00000494800 STAT5BP51692 787 aa20.01■□□□□ 0.79
HDAC4-211ENST00000494800 NONOQ15233 471 aaKnown RBP eCLIP20.01■□□□□ 0.79
HDAC4-211ENST00000494800 MIS18BP1Q6P0N0 1132 aa20.01■□□□□ 0.79
HDAC4-211ENST00000494800 Q7L0L9 218 aa20.01■□□□□ 0.79
HDAC4-211ENST00000494800 PLPPR4Q7Z2D5 763 aa20.01■□□□□ 0.79
HDAC4-211ENST00000494800 LMBR1Q8WVP7 490 aa20.01■□□□□ 0.79
HDAC4-211ENST00000494800 AIFM3Q96NN9 605 aa20.01■□□□□ 0.79
HDAC4-211ENST00000494800 LIMCH1Q9UPQ0 1083 aa20.01■□□□□ 0.79
HDAC4-211ENST00000494800 TRPC6Q9Y210 931 aa20.01■□□□□ 0.79
HDAC4-211ENST00000494800 RRN3P2A6NIE6 340 aa20■□□□□ 0.79
HDAC4-211ENST00000494800 RSPH10B2B2RC85 870 aa20■□□□□ 0.79
HDAC4-211ENST00000494800 BAIAP3O94812 1187 aa20■□□□□ 0.79
HDAC4-211ENST00000494800 RSPH10BP0C881 870 aa20■□□□□ 0.79
HDAC4-211ENST00000494800 KRT76Q01546 638 aa20■□□□□ 0.79
HDAC4-211ENST00000494800 HIC1Q14526 733 aa20■□□□□ 0.79
HDAC4-211ENST00000494800 RAB30Q15771 203 aa20■□□□□ 0.79
HDAC4-211ENST00000494800 ZNF618Q5T7W0 954 aa20■□□□□ 0.79
HDAC4-211ENST00000494800 ZNF746Q6NUN9 644 aaPredicted RBP20■□□□□ 0.79
HDAC4-211ENST00000494800 TAF2Q6P1X5 1199 aa20■□□□□ 0.79
HDAC4-211ENST00000494800 RSPH3Q86UC2 560 aa20■□□□□ 0.79
HDAC4-211ENST00000494800 SMAP1Q8IYB5 467 aaPredicted RBP20■□□□□ 0.79
HDAC4-211ENST00000494800 PHF20Q9BVI0 1012 aa20■□□□□ 0.79
HDAC4-211ENST00000494800 CXXC1Q9P0U4 656 aaPredicted RBP20■□□□□ 0.79
HDAC4-211ENST00000494800 MSRAQ9UJ68 235 aa20■□□□□ 0.79
HDAC4-211ENST00000494800 KCNJ14Q9UNX9 436 aa20■□□□□ 0.79
HDAC4-211ENST00000494800 DOCK5Q9H7D0 1870 aa19.99■□□□□ 0.79
HDAC4-211ENST00000494800 ATG7O95352 703 aa19.99■□□□□ 0.79
HDAC4-211ENST00000494800 CTDNEP1O95476 244 aa19.99■□□□□ 0.79
HDAC4-211ENST00000494800 RPLP2P05387 115 aaKnown RBP19.99■□□□□ 0.79
HDAC4-211ENST00000494800 DNAJB2P25686 324 aa19.99■□□□□ 0.79
HDAC4-211ENST00000494800 TRIM29Q14134 588 aa19.99■□□□□ 0.79
HDAC4-211ENST00000494800 GRIK4Q16099 956 aa19.99■□□□□ 0.79
HDAC4-211ENST00000494800 TRIM71Q2Q1W2 868 aaKnown RBP19.99■□□□□ 0.79
HDAC4-211ENST00000494800 TUBE1Q9UJT0 475 aa19.99■□□□□ 0.79
HDAC4-211ENST00000494800 TANC1Q9C0D5 1861 aa19.99■□□□□ 0.79
HDAC4-211ENST00000494800 SZT2Q5T011 3432 aa19.98■□□□□ 0.79
HDAC4-211ENST00000494800 DHX15O43143 795 aaKnown RBP19.98■□□□□ 0.79
HDAC4-211ENST00000494800 EFCAB14O75071 495 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms