RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 PRAMEF18Q5VWM3 479 aa7.72□□□□□ -1.17
NCL-210ENST00000494618 BTBD8Q5XKL5 378 aa7.72□□□□□ -1.17
NCL-210ENST00000494618 TMC5Q6UXY8 1006 aa7.72□□□□□ -1.17
NCL-210ENST00000494618 TTLL10Q6ZVT0 673 aa7.72□□□□□ -1.17
NCL-210ENST00000494618 SH3RF2Q8TEC5 729 aa7.72□□□□□ -1.17
NCL-210ENST00000494618 SCLYQ96I15 445 aa7.72□□□□□ -1.17
NCL-210ENST00000494618 SPATA25Q9BR10 227 aa7.72□□□□□ -1.17
NCL-210ENST00000494618 CELF4Q9BZC1 486 aaKnown RBP7.72□□□□□ -1.17
NCL-210ENST00000494618 TELO2Q9Y4R8 837 aa7.72□□□□□ -1.17
NCL-210ENST00000494618 ATP23Q9Y6H3 246 aa7.72□□□□□ -1.17
NCL-210ENST00000494618 TCRBV16S1A1N1A0A5B0 115 aa7.71□□□□□ -1.18
NCL-210ENST00000494618 JAM2P57087 298 aa7.71□□□□□ -1.18
NCL-210ENST00000494618 FIGNQ5HY92 759 aa7.71□□□□□ -1.18
NCL-210ENST00000494618 PTRH1Q86Y79 214 aaKnown RBP7.71□□□□□ -1.18
NCL-210ENST00000494618 HOMER1Q86YM7 354 aa7.71□□□□□ -1.18
NCL-210ENST00000494618 TRIM39Q9HCM9 518 aa7.71□□□□□ -1.18
NCL-210ENST00000494618 DLL4Q9NR61 685 aa7.71□□□□□ -1.18
NCL-210ENST00000494618 USP40Q9NVE5 1235 aa7.71□□□□□ -1.18
NCL-210ENST00000494618 RIC8BQ9NVN3 520 aa7.71□□□□□ -1.18
NCL-210ENST00000494618 CROTQ9UKG9 612 aa7.71□□□□□ -1.18
NCL-210ENST00000494618 COQ6Q9Y2Z9 468 aa7.71□□□□□ -1.18
NCL-210ENST00000494618 ESYT3A0FGR9 886 aa7.7□□□□□ -1.18
NCL-210ENST00000494618 ZNF561-AS1K7EIQ3 104 aa7.7□□□□□ -1.18
NCL-210ENST00000494618 ASMTLO95671 621 aa7.7□□□□□ -1.18
NCL-210ENST00000494618 AMY2AP04746 511 aa7.7□□□□□ -1.18
NCL-210ENST00000494618 CKMP06732 381 aa7.7□□□□□ -1.18
NCL-210ENST00000494618 PTPN1P18031 435 aaKnown RBP7.7□□□□□ -1.18
NCL-210ENST00000494618 AMY2BP19961 511 aa7.7□□□□□ -1.18
NCL-210ENST00000494618 GJA9P57773 515 aa7.7□□□□□ -1.18
NCL-210ENST00000494618 FGD2Q7Z6J4 655 aa7.7□□□□□ -1.18
NCL-210ENST00000494618 SYT8Q8NBV8 401 aa7.7□□□□□ -1.18
NCL-210ENST00000494618 FEZF2Q8TBJ5 459 aa7.7□□□□□ -1.18
NCL-210ENST00000494618 ADAMTS17Q8TE56 1095 aa7.7□□□□□ -1.18
NCL-210ENST00000494618 RNPC3Q96LT9 517 aaKnown RBP7.7□□□□□ -1.18
NCL-210ENST00000494618 ZSWIM3Q96MP5 696 aa7.7□□□□□ -1.18
NCL-210ENST00000494618 KRTAP9-9Q9BYP9 154 aa7.7□□□□□ -1.18
NCL-210ENST00000494618 KRTAP9-4Q9BYQ2 154 aa7.7□□□□□ -1.18
NCL-210ENST00000494618 KANSL2Q9H9L4 492 aa7.7□□□□□ -1.18
NCL-210ENST00000494618 OTOL1A6NHN0 477 aaPredicted RBP7.69□□□□□ -1.18
NCL-210ENST00000494618 DDX3XO00571 662 aaKnown RBP eCLIP7.69□□□□□ -1.18
NCL-210ENST00000494618 MAN2B1O00754 1011 aa7.69□□□□□ -1.18
NCL-210ENST00000494618 HOXA5P20719 270 aa7.69□□□□□ -1.18
NCL-210ENST00000494618 TCEA2Q15560 299 aa7.69□□□□□ -1.18
NCL-210ENST00000494618 PRR31Q5SQ13 230 aa7.69□□□□□ -1.18
NCL-210ENST00000494618 NT5DC1Q5TFE4 455 aa7.69□□□□□ -1.18
NCL-210ENST00000494618 CD276Q5ZPR3 534 aa7.69□□□□□ -1.18
NCL-210ENST00000494618 DDX53Q86TM3 631 aaKnown RBP7.69□□□□□ -1.18
NCL-210ENST00000494618 ZDHHC14Q8IZN3 488 aa7.69□□□□□ -1.18
NCL-210ENST00000494618 CISD2Q8N5K1 135 aaKnown RBP7.69□□□□□ -1.18
NCL-210ENST00000494618 APPBP2Q92624 585 aa7.69□□□□□ -1.18
NCL-210ENST00000494618 CLUHP3Q96NS8 147 aa7.69□□□□□ -1.18
NCL-210ENST00000494618 XYLT2Q9H1B5 865 aa7.69□□□□□ -1.18
NCL-210ENST00000494618 L2HGDHQ9H9P8 463 aa7.69□□□□□ -1.18
NCL-210ENST00000494618 ACOT7O00154 380 aa7.68□□□□□ -1.18
NCL-210ENST00000494618 PPP1R12AO14974 1030 aaPredicted RBP7.68□□□□□ -1.18
NCL-210ENST00000494618 CLASP2O75122 1294 aaKnown RBP7.68□□□□□ -1.18
NCL-210ENST00000494618 FBXO21O94952 628 aa7.68□□□□□ -1.18
NCL-210ENST00000494618 ASLP04424 464 aa7.68□□□□□ -1.18
NCL-210ENST00000494618 IL13P35225 146 aa7.68□□□□□ -1.18
NCL-210ENST00000494618 IGFALSP35858 605 aa7.68□□□□□ -1.18
NCL-210ENST00000494618 FLT3P36888 993 aa7.68□□□□□ -1.18
NCL-210ENST00000494618 KIAA2012Q0VF49 1180 aa7.68□□□□□ -1.18
NCL-210ENST00000494618 FAM26FQ5R3K3 315 aa7.68□□□□□ -1.18
NCL-210ENST00000494618 HHIPL2Q6UWX4 724 aa7.68□□□□□ -1.18
NCL-210ENST00000494618 FAM124AQ86V42 546 aa7.68□□□□□ -1.18
NCL-210ENST00000494618 ZNF761Q86XN6 746 aaPredicted RBP7.68□□□□□ -1.18
NCL-210ENST00000494618 PROSER1Q86XN7 944 aa7.68□□□□□ -1.18
NCL-210ENST00000494618 IGSF22Q8N9C0 903 aa7.68□□□□□ -1.18
NCL-210ENST00000494618 DTX3Q8N9I9 347 aa7.68□□□□□ -1.18
NCL-210ENST00000494618 SMURF1Q9HCE7 757 aa7.68□□□□□ -1.18
NCL-210ENST00000494618 RBPJLQ9UBG7 517 aa7.68□□□□□ -1.18
NCL-210ENST00000494618 FAM90A27PA6NNH2 459 aa7.67□□□□□ -1.18
NCL-210ENST00000494618 OPA1O60313 960 aa7.67□□□□□ -1.18
NCL-210ENST00000494618 RFPL3O75679 317 aa7.67□□□□□ -1.18
NCL-210ENST00000494618 CYP1A1P04798 512 aaPredicted RBP7.67□□□□□ -1.18
NCL-210ENST00000494618 CTSWP56202 376 aa7.67□□□□□ -1.18
NCL-210ENST00000494618 PFKPQ01813 784 aa7.67□□□□□ -1.18
NCL-210ENST00000494618 RGL3Q3MIN7 710 aa7.67□□□□□ -1.18
NCL-210ENST00000494618 MCTP2Q6DN12 878 aa7.67□□□□□ -1.18
NCL-210ENST00000494618 OVCH1Q7RTY7 1134 aa7.67□□□□□ -1.18
NCL-210ENST00000494618 FRMD5Q7Z6J6 570 aa7.67□□□□□ -1.18
NCL-210ENST00000494618 NOP9Q86U38 636 aaKnown RBP7.67□□□□□ -1.18
NCL-210ENST00000494618 C2orf69Q8N8R5 385 aa7.67□□□□□ -1.18
NCL-210ENST00000494618 ARHGAP20Q9P2F6 1191 aa7.67□□□□□ -1.18
NCL-210ENST00000494618 ARHGAP28Q9P2N2 729 aa7.67□□□□□ -1.18
NCL-210ENST00000494618 WASF3Q9UPY6 502 aa7.67□□□□□ -1.18
NCL-210ENST00000494618 SLC12A8A0AV02 714 aa7.66□□□□□ -1.18
NCL-210ENST00000494618 PRAMEF25A6NGN4 478 aa7.66□□□□□ -1.18
NCL-210ENST00000494618 KCNK3O14649 394 aa7.66□□□□□ -1.18
NCL-210ENST00000494618 ZNF28P17035 718 aa7.66□□□□□ -1.18
NCL-210ENST00000494618 KCNA6P17658 529 aa7.66□□□□□ -1.18
NCL-210ENST00000494618 DBPQ10586 325 aaPredicted RBP7.66□□□□□ -1.18
NCL-210ENST00000494618 SKIDA1Q1XH10 827 aa7.66□□□□□ -1.18
NCL-210ENST00000494618 TMEM177Q53S58 311 aa7.66□□□□□ -1.18
NCL-210ENST00000494618 TRMT10BQ6PF06 316 aaKnown RBP7.66□□□□□ -1.18
NCL-210ENST00000494618 C16orf86Q6ZW13 317 aa7.66□□□□□ -1.18
NCL-210ENST00000494618 UBE2R2Q712K3 238 aaPredicted RBP7.66□□□□□ -1.18
NCL-210ENST00000494618 IGDCC4Q8TDY8 1250 aa7.66□□□□□ -1.18
NCL-210ENST00000494618 TMEM168Q9H0V1 697 aa7.66□□□□□ -1.18
NCL-210ENST00000494618 FANCLQ9NW38 375 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms