RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 SSRP1Q08945 709 aaKnown RBP37.88■■■■□ 3.65
CBX4-203ENST00000494546 TRIM71Q2Q1W2 868 aaKnown RBP37.88■■■■□ 3.65
CBX4-203ENST00000494546 SERINC5Q86VE9 423 aa37.88■■■■□ 3.65
CBX4-203ENST00000494546 CCDC148Q8NFR7 591 aa37.88■■■■□ 3.65
CBX4-203ENST00000494546 CDX2Q99626 313 aaPredicted RBP37.88■■■■□ 3.65
CBX4-203ENST00000494546 SETD4Q9NVD3 440 aa37.88■■■■□ 3.65
CBX4-203ENST00000494546 HOXC8P31273 242 aa37.87■■■■□ 3.65
CBX4-203ENST00000494546 ZNF618Q5T7W0 954 aa37.87■■■■□ 3.65
CBX4-203ENST00000494546 SDF4Q9BRK5 362 aa37.87■■■■□ 3.65
CBX4-203ENST00000494546 SLC9A2Q9UBY0 812 aa37.87■■■■□ 3.65
CBX4-203ENST00000494546 MSRAQ9UJ68 235 aa37.87■■■■□ 3.65
CBX4-203ENST00000494546 TREHO43280 583 aa37.86■■■■□ 3.65
CBX4-203ENST00000494546 ANAPC15P60006 121 aa37.86■■■■□ 3.65
CBX4-203ENST00000494546 MCTP2Q6DN12 878 aa37.86■■■■□ 3.65
CBX4-203ENST00000494546 AGO4Q9HCK5 861 aaKnown RBP37.86■■■■□ 3.65
CBX4-203ENST00000494546 MEIS1O00470 390 aa37.85■■■■□ 3.65
CBX4-203ENST00000494546 PARNO95453 639 aaKnown RBP37.85■■■■□ 3.65
CBX4-203ENST00000494546 GNAT1P11488 350 aa37.85■■■■□ 3.65
CBX4-203ENST00000494546 THPOP40225 353 aa37.85■■■■□ 3.65
CBX4-203ENST00000494546 GPNMBQ14956 572 aa37.85■■■■□ 3.65
CBX4-203ENST00000494546 RAB30Q15771 203 aa37.85■■■■□ 3.65
CBX4-203ENST00000494546 BICD2Q8TD16 824 aa37.85■■■■□ 3.65
CBX4-203ENST00000494546 RASGRP4Q8TDF6 673 aa37.85■■■■□ 3.65
CBX4-203ENST00000494546 GLG1Q92896 1179 aa37.85■■■■□ 3.65
CBX4-203ENST00000494546 ZNF576Q9H609 170 aa37.85■■■■□ 3.65
CBX4-203ENST00000494546 ATP2A2P16615 1042 aaKnown RBP37.84■■■■□ 3.65
CBX4-203ENST00000494546 MARK3P27448 753 aa37.84■■■■□ 3.65
CBX4-203ENST00000494546 CPLX2Q6PUV4 134 aaKnown RBP37.84■■■■□ 3.65
CBX4-203ENST00000494546 NFASCO94856 1347 aa37.84■■■■□ 3.65
CBX4-203ENST00000494546 NBNO60934 754 aa37.83■■■■□ 3.65
CBX4-203ENST00000494546 RABGGTBP53611 331 aa37.83■■■■□ 3.65
CBX4-203ENST00000494546 ITGB3BPQ13352 177 aaPredicted RBP37.83■■■■□ 3.65
CBX4-203ENST00000494546 PLA2G4DQ86XP0 818 aa37.83■■■■□ 3.65
CBX4-203ENST00000494546 ERAP1Q9NZ08 941 aa37.83■■■■□ 3.65
CBX4-203ENST00000494546 FAM86B1E9PN63 330 aa37.82■■■■□ 3.64
CBX4-203ENST00000494546 CYP3A4P08684 503 aa37.82■■■■□ 3.64
CBX4-203ENST00000494546 FAM86B2P0C5J1 330 aa37.82■■■■□ 3.64
CBX4-203ENST00000494546 NLRP5P59047 1200 aa37.82■■■■□ 3.64
CBX4-203ENST00000494546 TRAF7Q6Q0C0 670 aa37.82■■■■□ 3.64
CBX4-203ENST00000494546 NIPA1Q7RTP0 329 aa37.82■■■■□ 3.64
CBX4-203ENST00000494546 LMBR1Q8WVP7 490 aa37.82■■■■□ 3.64
CBX4-203ENST00000494546 CRYGNQ8WXF5 182 aa37.82■■■■□ 3.64
CBX4-203ENST00000494546 MYLIPQ8WY64 445 aa37.82■■■■□ 3.64
CBX4-203ENST00000494546 SMARCAD1Q9H4L7 1026 aa37.82■■■■□ 3.64
CBX4-203ENST00000494546 SH3GLB2Q9NR46 395 aa37.82■■■■□ 3.64
CBX4-203ENST00000494546 EIF5BO60841 1220 aaKnown RBP37.81■■■■□ 3.64
CBX4-203ENST00000494546 NKX2-4Q9H2Z4 354 aa37.81■■■■□ 3.64
CBX4-203ENST00000494546 YBX2Q9Y2T7 364 aaKnown RBP37.81■■■■□ 3.64
CBX4-203ENST00000494546 DEXIO95424 95 aa37.8■■■■□ 3.64
CBX4-203ENST00000494546 ACTR2P61160 394 aa37.8■■■■□ 3.64
CBX4-203ENST00000494546 GRIN2CQ14957 1233 aa37.8■■■■□ 3.64
CBX4-203ENST00000494546 SLKQ9H2G2 1235 aaPredicted RBP37.8■■■■□ 3.64
CBX4-203ENST00000494546 NRCAMQ92823 1304 aa37.8■■■■□ 3.64
CBX4-203ENST00000494546 RSPH10B2B2RC85 870 aa37.79■■■■□ 3.64
CBX4-203ENST00000494546 DDX39AO00148 427 aaKnown RBP37.79■■■■□ 3.64
CBX4-203ENST00000494546 BAIAP3O94812 1187 aa37.79■■■■□ 3.64
CBX4-203ENST00000494546 CXCL10P02778 98 aa37.79■■■■□ 3.64
CBX4-203ENST00000494546 RSPH10BP0C881 870 aa37.79■■■■□ 3.64
CBX4-203ENST00000494546 PPFIA1Q13136 1202 aa37.79■■■■□ 3.64
CBX4-203ENST00000494546 UIMC1Q96RL1 719 aa37.79■■■■□ 3.64
CBX4-203ENST00000494546 AZI2Q9H6S1 392 aa37.79■■■■□ 3.64
CBX4-203ENST00000494546 TPCN1Q9ULQ1 816 aa37.79■■■■□ 3.64
CBX4-203ENST00000494546 EMSYQ7Z589 1322 aa37.79■■■■□ 3.64
CBX4-203ENST00000494546 TET1Q8NFU7 2136 aa37.78■■■■□ 3.64
CBX4-203ENST00000494546 RBAK-RBAKDNI3L0D1 243 aa37.78■■■■□ 3.64
CBX4-203ENST00000494546 SCRN1Q12765 414 aa37.78■■■■□ 3.64
CBX4-203ENST00000494546 MBTPS1Q14703 1052 aa37.78■■■■□ 3.64
CBX4-203ENST00000494546 CNKSR3Q6P9H4 555 aa37.78■■■■□ 3.64
CBX4-203ENST00000494546 SLC9A7Q96T83 725 aa37.78■■■■□ 3.64
CBX4-203ENST00000494546 PCYT2Q99447 389 aa37.78■■■■□ 3.64
CBX4-203ENST00000494546 IGLV3-22A0A075B6J6 115 aa37.77■■■■□ 3.64
CBX4-203ENST00000494546 LGR5O75473 907 aa37.77■■■■□ 3.64
CBX4-203ENST00000494546 ADAM17P78536 824 aa37.77■■■■□ 3.64
CBX4-203ENST00000494546 SLC28A3Q9HAS3 691 aa37.77■■■■□ 3.64
CBX4-203ENST00000494546 PCDHA11Q9Y5I1 949 aa37.77■■■■□ 3.64
CBX4-203ENST00000494546 CTSHP09668 335 aa37.76■■■■□ 3.64
CBX4-203ENST00000494546 MYOGP15173 224 aa37.76■■■■□ 3.64
CBX4-203ENST00000494546 KCNJ6P48051 423 aa37.76■■■■□ 3.64
CBX4-203ENST00000494546 AIFM3Q96NN9 605 aa37.76■■■■□ 3.64
CBX4-203ENST00000494546 SEC24BO95487 1268 aa37.75■■■■□ 3.63
CBX4-203ENST00000494546 FOSL2P15408 326 aa37.75■■■■□ 3.63
CBX4-203ENST00000494546 AK2P54819 239 aa37.75■■■■□ 3.63
CBX4-203ENST00000494546 SETQ01105 290 aaPredicted RBP37.75■■■■□ 3.63
CBX4-203ENST00000494546 ANKRD1Q15327 319 aa37.75■■■■□ 3.63
CBX4-203ENST00000494546 GRIK4Q16099 956 aa37.75■■■■□ 3.63
CBX4-203ENST00000494546 PHOSPHO2Q8TCD6 241 aa37.75■■■■□ 3.63
CBX4-203ENST00000494546 ZNF577Q9BSK1 485 aa37.75■■■■□ 3.63
CBX4-203ENST00000494546 IPO5O00410 1097 aaKnown RBP37.74■■■■□ 3.63
CBX4-203ENST00000494546 PFKFB2O60825 505 aa37.74■■■■□ 3.63
CBX4-203ENST00000494546 CDKL5O76039 1030 aa37.74■■■■□ 3.63
CBX4-203ENST00000494546 CCNE2O96020 404 aa37.74■■■■□ 3.63
CBX4-203ENST00000494546 TCTN1Q2MV58 587 aa37.74■■■■□ 3.63
CBX4-203ENST00000494546 PRR16Q569H4 304 aa37.74■■■■□ 3.63
CBX4-203ENST00000494546 PCDHA4Q9UN74 947 aa37.74■■■■□ 3.63
CBX4-203ENST00000494546 GBF1Q92538 1859 aa37.73■■■■□ 3.63
CBX4-203ENST00000494546 COL6A3P12111 3177 aa37.73■■■■□ 3.63
CBX4-203ENST00000494546 CAND2O75155 1236 aa37.73■■■■□ 3.63
CBX4-203ENST00000494546 WDR5P61964 334 aaKnown RBP37.73■■■■□ 3.63
CBX4-203ENST00000494546 IGBP1P78318 339 aa37.73■■■■□ 3.63
CBX4-203ENST00000494546 TRPC6Q9Y210 931 aa37.73■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms