RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 CAGE1Q8TC20 777 aa24.92■■□□□ 1.58
HPS3-207ENST00000494327 ATP6V0A1Q93050 837 aa24.92■■□□□ 1.58
HPS3-207ENST00000494327 RNPEPQ9H4A4 650 aa24.92■■□□□ 1.58
HPS3-207ENST00000494327 SETD4Q9NVD3 440 aa24.92■■□□□ 1.58
HPS3-207ENST00000494327 ORC3Q9UBD5 711 aaPredicted RBP24.92■■□□□ 1.58
HPS3-207ENST00000494327 NFASCO94856 1347 aa24.91■■□□□ 1.58
HPS3-207ENST00000494327 MARK3P27448 753 aa24.91■■□□□ 1.58
HPS3-207ENST00000494327 PRR16Q569H4 304 aa24.91■■□□□ 1.58
HPS3-207ENST00000494327 Q7L0L9 218 aa24.91■■□□□ 1.58
HPS3-207ENST00000494327 GTF3C6Q969F1 213 aa24.91■■□□□ 1.58
HPS3-207ENST00000494327 C22orf23Q9BZE7 217 aa24.91■■□□□ 1.58
HPS3-207ENST00000494327 STK36Q9NRP7 1315 aa24.9■■□□□ 1.58
HPS3-207ENST00000494327 IGLV3-22A0A075B6J6 115 aa24.9■■□□□ 1.58
HPS3-207ENST00000494327 XBP1P17861 261 aa24.9■■□□□ 1.58
HPS3-207ENST00000494327 ACTR2P61160 394 aa24.9■■□□□ 1.58
HPS3-207ENST00000494327 AFAP1L1Q8TED9 768 aa24.9■■□□□ 1.58
HPS3-207ENST00000494327 WNT8BQ93098 351 aa24.9■■□□□ 1.58
HPS3-207ENST00000494327 ZNF577Q9BSK1 485 aa24.9■■□□□ 1.58
HPS3-207ENST00000494327 FTOQ9C0B1 505 aaKnown RBP eCLIP24.9■■□□□ 1.58
HPS3-207ENST00000494327 SMARCAD1Q9H4L7 1026 aa24.9■■□□□ 1.58
HPS3-207ENST00000494327 GJB4Q9NTQ9 266 aa24.9■■□□□ 1.58
HPS3-207ENST00000494327 TREHO43280 583 aa24.89■■□□□ 1.58
HPS3-207ENST00000494327 CKBP12277 381 aa24.89■■□□□ 1.58
HPS3-207ENST00000494327 SELPP16109 830 aa24.89■■□□□ 1.58
HPS3-207ENST00000494327 GPR153Q6NV75 609 aa24.89■■□□□ 1.58
HPS3-207ENST00000494327 LRRC8DQ7L1W4 858 aa24.89■■□□□ 1.58
HPS3-207ENST00000494327 DEFB123Q8N688 67 aa24.89■■□□□ 1.58
HPS3-207ENST00000494327 TBCKQ8TEA7 893 aa24.89■■□□□ 1.58
HPS3-207ENST00000494327 HERVK_113Q902F9 699 aa24.89■■□□□ 1.58
HPS3-207ENST00000494327 MTIF3Q9H2K0 278 aaKnown RBP24.89■■□□□ 1.58
HPS3-207ENST00000494327 AZI2Q9H6S1 392 aa24.89■■□□□ 1.58
HPS3-207ENST00000494327 ERAP1Q9NZ08 941 aa24.89■■□□□ 1.58
HPS3-207ENST00000494327 CXXC1Q9P0U4 656 aaPredicted RBP24.89■■□□□ 1.58
HPS3-207ENST00000494327 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.88■■□□□ 1.57
HPS3-207ENST00000494327 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.88■■□□□ 1.57
HPS3-207ENST00000494327 ZBBXA8MT70 800 aa24.88■■□□□ 1.57
HPS3-207ENST00000494327 IPO5O00410 1097 aaKnown RBP24.88■■□□□ 1.57
HPS3-207ENST00000494327 GNAT1P11488 350 aa24.88■■□□□ 1.57
HPS3-207ENST00000494327 CIITAP33076 1130 aa24.88■■□□□ 1.57
HPS3-207ENST00000494327 RFC2P35250 354 aa24.88■■□□□ 1.57
HPS3-207ENST00000494327 SMAD3P84022 425 aaKnown RBP24.88■■□□□ 1.57
HPS3-207ENST00000494327 SETQ01105 290 aaPredicted RBP24.88■■□□□ 1.57
HPS3-207ENST00000494327 GALNT17Q6IS24 598 aa24.88■■□□□ 1.57
HPS3-207ENST00000494327 DAGLBQ8NCG7 672 aa24.88■■□□□ 1.57
HPS3-207ENST00000494327 WASF1Q92558 559 aa24.88■■□□□ 1.57
HPS3-207ENST00000494327 VWCEQ96DN2 955 aa24.88■■□□□ 1.57
HPS3-207ENST00000494327 PFKMP08237 780 aa24.87■■□□□ 1.57
HPS3-207ENST00000494327 THPOP40225 353 aa24.87■■□□□ 1.57
HPS3-207ENST00000494327 USP11P51784 963 aa24.87■■□□□ 1.57
HPS3-207ENST00000494327 NPY5RQ15761 445 aa24.87■■□□□ 1.57
HPS3-207ENST00000494327 TRIM71Q2Q1W2 868 aaKnown RBP24.87■■□□□ 1.57
HPS3-207ENST00000494327 FAM109BQ6ICB4 259 aaPredicted RBP24.87■■□□□ 1.57
HPS3-207ENST00000494327 SERINC5Q86VE9 423 aa24.87■■□□□ 1.57
HPS3-207ENST00000494327 FAM177A1Q8N128 213 aaPredicted RBP24.87■■□□□ 1.57
HPS3-207ENST00000494327 PCYT2Q99447 389 aa24.87■■□□□ 1.57
HPS3-207ENST00000494327 KIF2CQ99661 725 aa24.87■■□□□ 1.57
HPS3-207ENST00000494327 PHF20Q9BVI0 1012 aa24.87■■□□□ 1.57
HPS3-207ENST00000494327 LIMCH1Q9UPQ0 1083 aa24.87■■□□□ 1.57
HPS3-207ENST00000494327 GRXCR1A8MXD5 290 aa24.86■■□□□ 1.57
HPS3-207ENST00000494327 M0R2N6 131 aa24.86■■□□□ 1.57
HPS3-207ENST00000494327 EDIL3O43854 480 aa24.86■■□□□ 1.57
HPS3-207ENST00000494327 LGR5O75473 907 aa24.86■■□□□ 1.57
HPS3-207ENST00000494327 CCNE2O96020 404 aa24.86■■□□□ 1.57
HPS3-207ENST00000494327 FDPSP14324 419 aaKnown RBP24.86■■□□□ 1.57
HPS3-207ENST00000494327 HOXC8P31273 242 aa24.86■■□□□ 1.57
HPS3-207ENST00000494327 ZNF618Q5T7W0 954 aa24.86■■□□□ 1.57
HPS3-207ENST00000494327 RASIP1Q5U651 963 aa24.86■■□□□ 1.57
HPS3-207ENST00000494327 LMBR1Q8WVP7 490 aa24.86■■□□□ 1.57
HPS3-207ENST00000494327 FAM161BQ96MY7 647 aa24.86■■□□□ 1.57
HPS3-207ENST00000494327 TBC1D22BQ9NU19 505 aa24.86■■□□□ 1.57
HPS3-207ENST00000494327 EMSYQ7Z589 1322 aa24.86■■□□□ 1.57
HPS3-207ENST00000494327 NRCAMQ92823 1304 aa24.86■■□□□ 1.57
HPS3-207ENST00000494327 DHX15O43143 795 aaKnown RBP24.85■■□□□ 1.57
HPS3-207ENST00000494327 JAK2O60674 1132 aa24.85■■□□□ 1.57
HPS3-207ENST00000494327 ACTN1P12814 892 aa24.85■■□□□ 1.57
HPS3-207ENST00000494327 STAT5BP51692 787 aa24.85■■□□□ 1.57
HPS3-207ENST00000494327 RBL2Q08999 1139 aa24.85■■□□□ 1.57
HPS3-207ENST00000494327 PPFIA1Q13136 1202 aa24.85■■□□□ 1.57
HPS3-207ENST00000494327 NONOQ15233 471 aaKnown RBP eCLIP24.85■■□□□ 1.57
HPS3-207ENST00000494327 NSUN7Q8NE18 718 aaKnown RBP24.85■■□□□ 1.57
HPS3-207ENST00000494327 TCEAL9Q9UHQ7 104 aa24.85■■□□□ 1.57
HPS3-207ENST00000494327 RBAK-RBAKDNI3L0D1 243 aa24.84■■□□□ 1.57
HPS3-207ENST00000494327 BACH1O14867 736 aa24.84■■□□□ 1.57
HPS3-207ENST00000494327 RBM25P49756 843 aaKnown RBP24.84■■□□□ 1.57
HPS3-207ENST00000494327 FOSBP53539 338 aa24.84■■□□□ 1.57
HPS3-207ENST00000494327 IGBP1P78318 339 aa24.84■■□□□ 1.57
HPS3-207ENST00000494327 GRIK4Q16099 956 aa24.84■■□□□ 1.57
HPS3-207ENST00000494327 ZNF697Q5TEC3 545 aa24.84■■□□□ 1.57
HPS3-207ENST00000494327 KRT25Q7Z3Z0 450 aa24.84■■□□□ 1.57
HPS3-207ENST00000494327 LENG9Q96B70 501 aa24.84■■□□□ 1.57
HPS3-207ENST00000494327 UPF2Q9HAU5 1272 aaKnown RBP24.84■■□□□ 1.57
HPS3-207ENST00000494327 TRPC6Q9Y210 931 aa24.84■■□□□ 1.57
HPS3-207ENST00000494327 SLC4A7Q9Y6M7 1214 aa24.84■■□□□ 1.57
HPS3-207ENST00000494327 CCDC194A0A1B0GVG4 234 aa24.83■■□□□ 1.57
HPS3-207ENST00000494327 ATG7O95352 703 aa24.83■■□□□ 1.57
HPS3-207ENST00000494327 GPNMBQ14956 572 aa24.83■■□□□ 1.57
HPS3-207ENST00000494327 INF2Q27J81 1249 aa24.83■■□□□ 1.57
HPS3-207ENST00000494327 ABHD15Q6UXT9 468 aa24.83■■□□□ 1.57
HPS3-207ENST00000494327 CCDC83Q8IWF9 413 aa24.83■■□□□ 1.57
HPS3-207ENST00000494327 OXER1Q8TDS5 423 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms