RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 TLR9Q9NR96 1032 aa3.54□□□□□ -1.84
PTPN12-212ENST00000494248 APEX2Q9UBZ4 518 aa3.54□□□□□ -1.84
PTPN12-212ENST00000494248 TIMM13Q9Y5L4 95 aaPredicted RBP3.54□□□□□ -1.84
PTPN12-212ENST00000494248 PROB1E7EW31 1015 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 CDC14BO60729 498 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 EIF5BO60841 1220 aaKnown RBP3.53□□□□□ -1.84
PTPN12-212ENST00000494248 KCNH1O95259 989 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 NUDT3O95989 172 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 CKMP06732 381 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 HIBADHP31937 336 aaKnown RBP3.53□□□□□ -1.84
PTPN12-212ENST00000494248 GLRBP48167 497 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 RPL11P62913 178 aaKnown RBP3.53□□□□□ -1.84
PTPN12-212ENST00000494248 USP10Q14694 798 aaKnown RBP3.53□□□□□ -1.84
PTPN12-212ENST00000494248 GNPTABQ3T906 1256 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 ZNF326Q5BKZ1 582 aaKnown RBP3.53□□□□□ -1.84
PTPN12-212ENST00000494248 EMC4Q5J8M3 183 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 STEAP3Q658P3 488 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 GAREM2Q75VX8 874 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 PRIMA1Q86XR5 153 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 KLHL6Q8WZ60 621 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 BBC3Q96PG8 261 aaPredicted RBP3.53□□□□□ -1.84
PTPN12-212ENST00000494248 LGR4Q9BXB1 951 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 KCND1Q9NSA2 647 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 GPRC5BQ9NZH0 403 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 PTGFRNQ9P2B2 879 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 ZFP69BQ9UJL9 534 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 PPT2Q9UMR5 302 aa3.53□□□□□ -1.84
PTPN12-212ENST00000494248 CHGBP05060 677 aa3.52□□□□□ -1.85
PTPN12-212ENST00000494248 PDIA4P13667 645 aaKnown RBP3.52□□□□□ -1.85
PTPN12-212ENST00000494248 MSX2P35548 267 aaPredicted RBP3.52□□□□□ -1.85
PTPN12-212ENST00000494248 TBR1Q16650 682 aa3.52□□□□□ -1.85
PTPN12-212ENST00000494248 SKIDA1Q1XH10 827 aa3.52□□□□□ -1.85
PTPN12-212ENST00000494248 LDLRAD1Q5T700 205 aa3.52□□□□□ -1.85
PTPN12-212ENST00000494248 SPTY2D1Q68D10 685 aaPredicted RBP3.52□□□□□ -1.85
PTPN12-212ENST00000494248 TMPRSS6Q8IU80 811 aa3.52□□□□□ -1.85
PTPN12-212ENST00000494248 REXO1L1PQ8IX06 675 aa3.52□□□□□ -1.85
PTPN12-212ENST00000494248 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.52□□□□□ -1.85
PTPN12-212ENST00000494248 CFHR4Q92496 578 aa3.52□□□□□ -1.85
PTPN12-212ENST00000494248 LMNAP02545 664 aaKnown RBP3.51□□□□□ -1.85
PTPN12-212ENST00000494248 DNAJA1P31689 397 aaKnown RBP3.51□□□□□ -1.85
PTPN12-212ENST00000494248 SLC7A5Q01650 507 aa3.51□□□□□ -1.85
PTPN12-212ENST00000494248 COL9A2Q14055 689 aaPredicted RBP3.51□□□□□ -1.85
PTPN12-212ENST00000494248 PCOLCEQ15113 449 aa3.51□□□□□ -1.85
PTPN12-212ENST00000494248 MBNL2Q5VZF2 373 aaKnown RBP3.51□□□□□ -1.85
PTPN12-212ENST00000494248 RBM12BQ8IXT5 1001 aaKnown RBP3.51□□□□□ -1.85
PTPN12-212ENST00000494248 CLEC4DQ8WXI8 215 aa3.51□□□□□ -1.85
PTPN12-212ENST00000494248 TMEM169Q96HH4 297 aa3.51□□□□□ -1.85
PTPN12-212ENST00000494248 ADARB2Q9NS39 739 aaKnown RBP3.51□□□□□ -1.85
PTPN12-212ENST00000494248 MYOTQ9UBF9 498 aa3.51□□□□□ -1.85
PTPN12-212ENST00000494248 AKT3Q9Y243 479 aa3.51□□□□□ -1.85
PTPN12-212ENST00000494248 EMC9Q9Y3B6 208 aa3.51□□□□□ -1.85
PTPN12-212ENST00000494248 GCP02774 474 aa3.5□□□□□ -1.85
PTPN12-212ENST00000494248 LCP1P13796 627 aa3.5□□□□□ -1.85
PTPN12-212ENST00000494248 GRIN1Q05586 938 aa3.5□□□□□ -1.85
PTPN12-212ENST00000494248 FBXW10Q5XX13 1052 aa3.5□□□□□ -1.85
PTPN12-212ENST00000494248 VASNQ6EMK4 673 aa3.5□□□□□ -1.85
PTPN12-212ENST00000494248 CRACR2BQ8N4Y2 399 aaPredicted RBP3.5□□□□□ -1.85
PTPN12-212ENST00000494248 RCBTB1Q8NDN9 531 aa3.5□□□□□ -1.85
PTPN12-212ENST00000494248 OR6P1Q8NGX9 317 aa3.5□□□□□ -1.85
PTPN12-212ENST00000494248 CARD11Q9BXL7 1154 aa3.5□□□□□ -1.85
PTPN12-212ENST00000494248 PLA2G3Q9NZ20 509 aa3.5□□□□□ -1.85
PTPN12-212ENST00000494248 ASH2LQ9UBL3 628 aa3.5□□□□□ -1.85
PTPN12-212ENST00000494248 SUGT1Q9Y2Z0 365 aa3.5□□□□□ -1.85
PTPN12-212ENST00000494248 A0A1W2PQH9 124 aa3.49□□□□□ -1.85
PTPN12-212ENST00000494248 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
PTPN12-212ENST00000494248 ANKRD34BA5PLL1 514 aa3.49□□□□□ -1.85
PTPN12-212ENST00000494248 PDE6AP16499 860 aa3.49□□□□□ -1.85
PTPN12-212ENST00000494248 RRADP55042 308 aa3.49□□□□□ -1.85
PTPN12-212ENST00000494248 TOP3AQ13472 1001 aaPredicted RBP3.49□□□□□ -1.85
PTPN12-212ENST00000494248 CHRNA2Q15822 529 aa3.49□□□□□ -1.85
PTPN12-212ENST00000494248 CCDC27Q2M243 656 aa3.49□□□□□ -1.85
PTPN12-212ENST00000494248 POMZP3Q6PJE2 187 aa3.49□□□□□ -1.85
PTPN12-212ENST00000494248 VRK3Q8IV63 474 aa3.49□□□□□ -1.85
PTPN12-212ENST00000494248 GPR135Q8IZ08 494 aa3.49□□□□□ -1.85
PTPN12-212ENST00000494248 CRBNQ96SW2 442 aa3.49□□□□□ -1.85
PTPN12-212ENST00000494248 CDIP1Q9H305 208 aa3.49□□□□□ -1.85
PTPN12-212ENST00000494248 METTL5Q9NRN9 209 aaKnown RBP3.49□□□□□ -1.85
PTPN12-212ENST00000494248 COA3Q9Y2R0 106 aaPredicted RBP3.49□□□□□ -1.85
PTPN12-212ENST00000494248 CCDC9Q9Y3X0 531 aaKnown RBP3.49□□□□□ -1.85
PTPN12-212ENST00000494248 TMEM191CA6NGB0 347 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 RPS6KA4O75676 772 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 FBXO21O94952 628 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 ZNF76P36508 570 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 SOX9P48436 509 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 GIPRP48546 466 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 GTF2A2P52657 109 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 ZNF143P52747 638 aaPredicted RBP3.48□□□□□ -1.85
PTPN12-212ENST00000494248 FANCCQ00597 558 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 PFKPQ01813 784 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 RRP1BQ14684 758 aaKnown RBP3.48□□□□□ -1.85
PTPN12-212ENST00000494248 TESK1Q15569 626 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 E4F1Q66K89 784 aaPredicted RBP3.48□□□□□ -1.85
PTPN12-212ENST00000494248 GTF2IRD2BQ6EKJ0 949 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 IQCEQ6IPM2 695 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 GTF2IRD2Q86UP8 949 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 KREMEN2Q8NCW0 462 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 SPATA32Q96LK8 384 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 TACO1Q9BSH4 297 aaKnown RBP3.48□□□□□ -1.85
PTPN12-212ENST00000494248 BCL2L13Q9BXK5 485 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms