RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 IRS1P35568 1242 aa11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 SNW1Q13573 536 aaKnown RBP11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 TERF2Q15554 542 aa11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 SNRNP48Q6IEG0 339 aaKnown RBP11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 Q6ZUG5 572 aa11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 DHX40Q8IX18 779 aaKnown RBP11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 KBTBD3Q8NAB2 608 aa11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 SDR42E1Q8WUS8 393 aa11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 TMEM121BQ9BXQ6 578 aaPredicted RBP11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 OCEL1Q9H607 264 aa11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 ALG13Q9NP73 1137 aaKnown RBP11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 ATG2AQ2TAZ0 1938 aa11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 EPG5Q9HCE0 2579 aa11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 CYP2D7A0A087X1C5 515 aa11.98□□□□□ -0.49
PDLIM1-205ENST00000493949 SLFN14P0C7P3 912 aa11.98□□□□□ -0.49
PDLIM1-205ENST00000493949 SFPQP23246 707 aaKnown RBP eCLIP11.98□□□□□ -0.49
PDLIM1-205ENST00000493949 PSMC6P62333 389 aa11.98□□□□□ -0.49
PDLIM1-205ENST00000493949 TEX35Q5T0J7 233 aa11.98□□□□□ -0.49
PDLIM1-205ENST00000493949 FMR1NBQ8N0W7 255 aaPredicted RBP11.98□□□□□ -0.49
PDLIM1-205ENST00000493949 TSC1Q92574 1164 aa11.98□□□□□ -0.49
PDLIM1-205ENST00000493949 CCDC17Q96LX7 622 aa11.98□□□□□ -0.49
PDLIM1-205ENST00000493949 TGS1Q96RS0 853 aaKnown RBP11.98□□□□□ -0.49
PDLIM1-205ENST00000493949 AP5M1Q9H0R1 490 aa11.98□□□□□ -0.49
PDLIM1-205ENST00000493949 TRMT13Q9NUP7 481 aaKnown RBP11.98□□□□□ -0.49
PDLIM1-205ENST00000493949 TFIP11Q9UBB9 837 aaKnown RBP11.98□□□□□ -0.49
PDLIM1-205ENST00000493949 V9GYY5 206 aaPredicted RBP11.98□□□□□ -0.49
PDLIM1-205ENST00000493949 DMDP11532 3685 aa11.98□□□□□ -0.49
PDLIM1-205ENST00000493949 MICAL3Q7RTP6 2002 aa11.98□□□□□ -0.49
PDLIM1-205ENST00000493949 NLRC5Q86WI3 1866 aa11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 GVINP1Q7Z2Y8 2422 aa11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 PTPDC1A2A3K4 754 aa11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 ZFYP08048 801 aaPredicted RBP11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 FGD1P98174 961 aa11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 EXOSC10Q01780 885 aaKnown RBP11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 SCRN1Q12765 414 aa11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 JAKMIP3Q5VZ66 844 aa11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 C11orf57Q6ZUT1 292 aaPredicted RBP11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 FAM133AQ8N9E0 248 aa11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 FSIP1Q8NA03 581 aa11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 EDAQ92838 391 aa11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 RAD9AQ99638 391 aa11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 MCM9Q9NXL9 1143 aa11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 KIAA1468Q9P260 1216 aa11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 FBXO40Q9UH90 709 aa11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 LCTP09848 1927 aa11.97□□□□□ -0.49
PDLIM1-205ENST00000493949 FAM237AA0A1B0GTK4 181 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 LINC01553A4QN01 128 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 H3BQ06 376 aaPredicted RBP11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 DYNC1LI2O43237 492 aaPredicted RBP11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 ZSCAN12O43309 604 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 PRKAB2O43741 272 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 GJB5O95377 273 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 CHGBP05060 677 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 CYP21A2P08686 494 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 EEF2P13639 858 aaKnown RBP11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 SMPD1P17405 629 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 NLRP12P59046 1061 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 WDR5P61964 334 aaKnown RBP11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 MMRN1Q13201 1228 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 TUBB2AQ13885 445 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 CT47A1Q5JQC4 288 aaPredicted RBP11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 FAM83BQ5T0W9 1011 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 IQSEC1Q6DN90 963 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 ZNF589Q86UQ0 364 aaPredicted RBP11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 ANKRD35Q8N283 1001 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 LCORLQ8N3X6 602 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 PRPF38AQ8NAV1 312 aaKnown RBP11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 CHST13Q8NET6 341 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 PABPC5Q96DU9 382 aaKnown RBP11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 MRPL38Q96DV4 380 aaKnown RBP11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 SLF1Q9BQI6 1058 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 LARP6Q9BRS8 491 aaKnown RBP11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 TUBB2BQ9BVA1 445 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 IRF2BPLQ9H1B7 796 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 BOLA2Q9H3K6 86 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 KANSL2Q9H9L4 492 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 GOPCQ9HD26 462 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 DNAI1Q9UI46 699 aa11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 ZNF215Q9UL58 517 aaPredicted RBP11.96□□□□□ -0.49
PDLIM1-205ENST00000493949 COL4A6Q14031 1691 aa11.96□□□□□ -0.5
PDLIM1-205ENST00000493949 DMXL1Q9Y485 3027 aa11.96□□□□□ -0.5
PDLIM1-205ENST00000493949 RALGAPA2Q2PPJ7 1873 aa11.95□□□□□ -0.5
PDLIM1-205ENST00000493949 MAGEB6P1A0A0J9YX57 407 aa11.95□□□□□ -0.5
PDLIM1-205ENST00000493949 EFCAB8A8MWE9 144 aa11.95□□□□□ -0.5
PDLIM1-205ENST00000493949 PROB1E7EW31 1015 aa11.95□□□□□ -0.5
PDLIM1-205ENST00000493949 ME1P48163 572 aa11.95□□□□□ -0.5
PDLIM1-205ENST00000493949 ETF1P62495 437 aaKnown RBP11.95□□□□□ -0.5
PDLIM1-205ENST00000493949 KMT5BQ4FZB7 885 aa11.95□□□□□ -0.5
PDLIM1-205ENST00000493949 ZMYM1Q5SVZ6 1142 aa11.95□□□□□ -0.5
PDLIM1-205ENST00000493949 NUP88Q99567 741 aaPredicted RBP11.95□□□□□ -0.5
PDLIM1-205ENST00000493949 POP1Q99575 1024 aaKnown RBP11.95□□□□□ -0.5
PDLIM1-205ENST00000493949 CRNKL1Q9BZJ0 848 aaKnown RBP11.95□□□□□ -0.5
PDLIM1-205ENST00000493949 FTOQ9C0B1 505 aaKnown RBP eCLIP11.95□□□□□ -0.5
PDLIM1-205ENST00000493949 DCP1AQ9NPI6 582 aaPredicted RBP11.95□□□□□ -0.5
PDLIM1-205ENST00000493949 MUTYHQ9UIF7 546 aa11.95□□□□□ -0.5
PDLIM1-205ENST00000493949 HOOK1Q9UJC3 728 aaKnown RBP11.95□□□□□ -0.5
PDLIM1-205ENST00000493949 ASB14A6NK59 587 aa11.94□□□□□ -0.5
PDLIM1-205ENST00000493949 RAD21O60216 631 aa11.94□□□□□ -0.5
PDLIM1-205ENST00000493949 JAK2O60674 1132 aa11.94□□□□□ -0.5
PDLIM1-205ENST00000493949 CDKL5O76039 1030 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms