RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 MAPK8IP2Q13387 824 aaPredicted RBP8.56□□□□□ -1.04
VEGFA-214ENST00000493786 LRRC41Q15345 812 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 FAM160B1Q5W0V3 765 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 HAUS3Q68CZ6 603 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 LHX8Q68G74 356 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 RDM1Q8NG50 284 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 HAS1Q92839 578 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 GLG1Q92896 1179 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 GJA10Q969M2 543 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 FERMT2Q96AC1 680 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 VTI1AQ96AJ9 217 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 MTMR9Q96QG7 549 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 USP28Q96RU2 1077 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 GPR20Q99678 358 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 TSEN34Q9BSV6 310 aaKnown RBP8.56□□□□□ -1.04
VEGFA-214ENST00000493786 KATNAL1Q9BW62 490 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 TMEM60Q9H2L4 133 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 UNC45AQ9H3U1 944 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 DISC1Q9NRI5 854 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 TFIP11Q9UBB9 837 aaKnown RBP8.56□□□□□ -1.04
VEGFA-214ENST00000493786 OGDHLQ9ULD0 1010 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 ZDHHC9Q9Y397 364 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 PCDHA10Q9Y5I2 948 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 CLIC4Q9Y696 253 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 CENPFP49454 3210 aa8.56□□□□□ -1.04
VEGFA-214ENST00000493786 KIAA1217Q5T5P2 1943 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 VWA3AA6NCI4 1184 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 A6NJR5 290 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 CCDC85CA6NKD9 419 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 SPTLC2O15270 562 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 DHX15O43143 795 aaKnown RBP8.55□□□□□ -1.04
VEGFA-214ENST00000493786 DKC1O60832 514 aaKnown RBP eCLIP8.55□□□□□ -1.04
VEGFA-214ENST00000493786 ADAMTS4O75173 837 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 PPFIA4O75335 1185 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 SUPT20HL2P0C7V6 817 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 TXLNAP40222 546 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 NASPP49321 788 aaPredicted RBP8.55□□□□□ -1.04
VEGFA-214ENST00000493786 FXR2P51116 673 aaKnown RBP eCLIP8.55□□□□□ -1.04
VEGFA-214ENST00000493786 CHMP4BP1P59074 171 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 NKX3-2P78367 333 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 DNM1Q05193 864 aaKnown RBP8.55□□□□□ -1.04
VEGFA-214ENST00000493786 PPP2R5CQ13362 524 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 SLC39A14Q15043 492 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 KCNA10Q16322 511 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 CSPP1Q1MSJ5 1256 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 HSDL1Q3SXM5 330 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 TMEM63BQ5T3F8 832 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 UTP14CQ5TAP6 766 aaKnown RBP8.55□□□□□ -1.04
VEGFA-214ENST00000493786 CKAP2LQ8IYA6 745 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 KRI1Q8N9T8 703 aaKnown RBP8.55□□□□□ -1.04
VEGFA-214ENST00000493786 ANKLE1Q8NAG6 615 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 RASSF8Q8NHQ8 419 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 NEK9Q8TD19 979 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 KCNG4Q8TDN1 519 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 TNPO1Q92973 898 aaKnown RBP8.55□□□□□ -1.04
VEGFA-214ENST00000493786 ATP6V0A1Q93050 837 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 SPATA32Q96LK8 384 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 GLT1D1Q96MS3 346 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 MTG1Q9BT17 334 aaPredicted RBP8.55□□□□□ -1.04
VEGFA-214ENST00000493786 FTOQ9C0B1 505 aaKnown RBP eCLIP8.55□□□□□ -1.04
VEGFA-214ENST00000493786 SCAND2PQ9GZW5 306 aaPredicted RBP8.55□□□□□ -1.04
VEGFA-214ENST00000493786 CRISPLD2Q9H0B8 497 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 SMARCAD1Q9H4L7 1026 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 LRWD1Q9UFC0 647 aa8.55□□□□□ -1.04
VEGFA-214ENST00000493786 MYADML2A6NDP7 307 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 POTEMA6NI47 508 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 CCNE2O96020 404 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 LGALS2P05162 132 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 ASGR1P07306 291 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 ZNF286BP0CG31 522 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 PTGS1P23219 599 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 MARCKSP29966 332 aaPredicted RBP8.54□□□□□ -1.04
VEGFA-214ENST00000493786 LONP1P36776 959 aaKnown RBP8.54□□□□□ -1.04
VEGFA-214ENST00000493786 ME1P48163 572 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 SLC26A2P50443 739 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 STAT5BP51692 787 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 ACLYP53396 1101 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 PDIA5Q14554 519 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 EPHA7Q15375 998 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 KRT79Q5XKE5 535 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 SWSAP1Q6NVH7 229 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 PDXDC2PQ6P474 469 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 C4orf32Q8N8J7 132 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 LINC00301Q8NCQ3 95 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 KLHDC9Q8NEP7 349 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 CDK5RAP3Q96JB5 506 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 AK8Q96MA6 479 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 CCDC43Q96MW1 224 aaKnown RBP8.54□□□□□ -1.04
VEGFA-214ENST00000493786 BCAS3Q9H6U6 928 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 ZNF302Q9NR11 478 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 ERAP1Q9NZ08 941 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 VAV3Q9UKW4 847 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 EMSYQ7Z589 1322 aa8.54□□□□□ -1.04
VEGFA-214ENST00000493786 A0A0U1RQG5 324 aaPredicted RBP8.53□□□□□ -1.04
VEGFA-214ENST00000493786 A0A1W2PQ45 241 aaPredicted RBP8.53□□□□□ -1.04
VEGFA-214ENST00000493786 GSTTP1A0A1W2PQM5 241 aa8.53□□□□□ -1.04
VEGFA-214ENST00000493786 A0A1W2PQY0 241 aa8.53□□□□□ -1.04
VEGFA-214ENST00000493786 GOLGA6L4A6NEF3 574 aa8.53□□□□□ -1.04
VEGFA-214ENST00000493786 H3BRB1 525 aa8.53□□□□□ -1.04
VEGFA-214ENST00000493786 PPP6R2O75170 966 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms