RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ZNF449Q6P9G9 518 aa21.7■■□□□ 1.06
RNF40-203ENST00000493683 NUDCD1Q96RS6 583 aa21.7■■□□□ 1.06
RNF40-203ENST00000493683 TCP10L2B9ZVM9 353 aa21.7■■□□□ 1.06
RNF40-203ENST00000493683 KCTD2Q14681 263 aa21.7■■□□□ 1.06
RNF40-203ENST00000493683 ZNF589Q86UQ0 364 aaPredicted RBP21.7■■□□□ 1.06
RNF40-203ENST00000493683 CCDC24Q8N4L8 307 aa21.7■■□□□ 1.06
RNF40-203ENST00000493683 ATP6V1E2Q96A05 226 aa21.7■■□□□ 1.06
RNF40-203ENST00000493683 CCDC138Q96M89 665 aa21.7■■□□□ 1.06
RNF40-203ENST00000493683 XAB2Q9HCS7 855 aaKnown RBP21.7■■□□□ 1.06
RNF40-203ENST00000493683 SAMSN1Q9NSI8 373 aaKnown RBP21.7■■□□□ 1.06
RNF40-203ENST00000493683 DNAAF3Q8N9W5 541 aa21.7■■□□□ 1.06
RNF40-203ENST00000493683 NUB1Q9Y5A7 615 aa21.7■■□□□ 1.06
RNF40-203ENST00000493683 CAV1Q03135 178 aa21.7■■□□□ 1.06
RNF40-203ENST00000493683 FAM47CQ5HY64 1035 aa21.7■■□□□ 1.06
RNF40-203ENST00000493683 KCTD6Q8NC69 237 aa21.7■■□□□ 1.06
RNF40-203ENST00000493683 UBE2TQ9NPD8 197 aaPredicted RBP21.7■■□□□ 1.06
RNF40-203ENST00000493683 NCAPG2Q86XI2 1143 aa21.69■■□□□ 1.06
RNF40-203ENST00000493683 BPIFA3Q9BQP9 254 aa21.69■■□□□ 1.06
RNF40-203ENST00000493683 ESRRAP11474 423 aaPredicted RBP21.69■■□□□ 1.06
RNF40-203ENST00000493683 CCND2P30279 289 aa21.69■■□□□ 1.06
RNF40-203ENST00000493683 BASP1P80723 227 aaKnown RBP21.69■■□□□ 1.06
RNF40-203ENST00000493683 NBPF9Q3BBW0 867 aa21.69■■□□□ 1.06
RNF40-203ENST00000493683 UNC5CLQ8IV45 518 aa21.69■■□□□ 1.06
RNF40-203ENST00000493683 SMYD4Q8IYR2 804 aaPredicted RBP21.69■■□□□ 1.06
RNF40-203ENST00000493683 RNF169Q8NCN4 708 aa21.69■■□□□ 1.06
RNF40-203ENST00000493683 PRPSAP2O60256 369 aa21.69■■□□□ 1.06
RNF40-203ENST00000493683 SEMA3FQ13275 785 aa21.69■■□□□ 1.06
RNF40-203ENST00000493683 SNX1Q13596 522 aa21.69■■□□□ 1.06
RNF40-203ENST00000493683 KIAA0825Q8IV33 1275 aa21.69■■□□□ 1.06
RNF40-203ENST00000493683 TAB3Q8N5C8 712 aaPredicted RBP21.69■■□□□ 1.06
RNF40-203ENST00000493683 ZNF579Q8NAF0 562 aaKnown RBP21.69■■□□□ 1.06
RNF40-203ENST00000493683 IGSF1Q8N6C5 1336 aa21.69■■□□□ 1.06
RNF40-203ENST00000493683 ABL1P00519 1130 aa21.69■■□□□ 1.06
RNF40-203ENST00000493683 PLA2G4BP0C869 781 aa21.69■■□□□ 1.06
RNF40-203ENST00000493683 KRT80Q6KB66 452 aa21.69■■□□□ 1.06
RNF40-203ENST00000493683 DHX38Q92620 1227 aaKnown RBP21.69■■□□□ 1.06
RNF40-203ENST00000493683 UPF3AQ9H1J1 476 aaKnown RBP21.69■■□□□ 1.06
RNF40-203ENST00000493683 ANTXR1Q9H6X2 564 aa21.69■■□□□ 1.06
RNF40-203ENST00000493683 SCNN1DP51172 638 aa21.68■■□□□ 1.06
RNF40-203ENST00000493683 ART3Q13508 389 aa21.68■■□□□ 1.06
RNF40-203ENST00000493683 LRRC41Q15345 812 aa21.68■■□□□ 1.06
RNF40-203ENST00000493683 CXorf38Q8TB03 319 aa21.68■■□□□ 1.06
RNF40-203ENST00000493683 GSTA4O15217 222 aa21.68■■□□□ 1.06
RNF40-203ENST00000493683 MYO1EQ12965 1108 aa21.68■■□□□ 1.06
RNF40-203ENST00000493683 PCGF5Q86SE9 256 aa21.68■■□□□ 1.06
RNF40-203ENST00000493683 BANK1Q8NDB2 785 aa21.68■■□□□ 1.06
RNF40-203ENST00000493683 ABCB6Q9NP58 842 aa21.68■■□□□ 1.06
RNF40-203ENST00000493683 SYNGAP1Q96PV0 1343 aa21.68■■□□□ 1.06
RNF40-203ENST00000493683 ZMYND10O75800 440 aa21.68■■□□□ 1.06
RNF40-203ENST00000493683 CCNYQ8ND76 341 aa21.68■■□□□ 1.06
RNF40-203ENST00000493683 MCUQ8NE86 351 aa21.68■■□□□ 1.06
RNF40-203ENST00000493683 LRRN2O75325 713 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 BMP3P12645 472 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 SLFN12LQ6IEE8 588 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 SESTD1Q86VW0 696 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 PROM2Q8N271 834 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 ADGBQ8N7X0 1667 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 CHEK2O96017 543 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 RPSAP08865 295 aaKnown RBP21.67■■□□□ 1.06
RNF40-203ENST00000493683 PLCG1P19174 1290 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 FAM133BQ5BKY9 247 aaKnown RBP21.67■■□□□ 1.06
RNF40-203ENST00000493683 RESP18Q5W5W9 173 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 ST13P4Q8IZP2 240 aaPredicted RBP21.67■■□□□ 1.06
RNF40-203ENST00000493683 FAM149B1Q96BN6 582 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 CENPKQ9BS16 269 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 TLR7Q9NYK1 1049 aaKnown RBP21.67■■□□□ 1.06
RNF40-203ENST00000493683 KRT37O76014 449 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 RSRC2Q7L4I2 434 aaKnown RBP21.67■■□□□ 1.06
RNF40-203ENST00000493683 SKA2Q8WVK7 121 aaPredicted RBP21.67■■□□□ 1.06
RNF40-203ENST00000493683 CEP170P1Q96L14 293 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 PIGSQ96S52 555 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 NOP53Q9NZM5 478 aaKnown RBP21.67■■□□□ 1.06
RNF40-203ENST00000493683 VGLL3A8MV65 326 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 PYGBP11216 843 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 GOLGA8FQ08AF8 430 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 GOLGA8DPQ0D2H9 430 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 KLC3Q6P597 504 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 SULF1Q8IWU6 871 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 PSPC1Q8WXF1 523 aaKnown RBP21.67■■□□□ 1.06
RNF40-203ENST00000493683 PUS3Q9BZE2 481 aaKnown RBP21.67■■□□□ 1.06
RNF40-203ENST00000493683 SERPINB13Q9UIV8 391 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 SPATA31E1Q6ZUB1 1445 aa21.67■■□□□ 1.06
RNF40-203ENST00000493683 PNMA6AP0CW24 399 aaPredicted RBP21.66■■□□□ 1.06
RNF40-203ENST00000493683 ORC2Q13416 577 aaPredicted RBP21.66■■□□□ 1.06
RNF40-203ENST00000493683 KRT31Q15323 416 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 E2F5Q15329 346 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 ALKBH5Q6P6C2 394 aaKnown RBP21.66■■□□□ 1.06
RNF40-203ENST00000493683 FAM160B2Q86V87 743 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 GIPC2Q8TF65 315 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 TTC25Q96NG3 672 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 TOM1L1O75674 476 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 SPARCL1Q14515 664 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 TMCO4Q5TGY1 634 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 HIBCHQ6NVY1 386 aaPredicted RBP21.66■■□□□ 1.06
RNF40-203ENST00000493683 GADL1Q6ZQY3 521 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 STK36Q9NRP7 1315 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 RCAN1P53805 252 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 PYROXD1Q8WU10 500 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 CASP2P42575 452 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 ARHGEF6Q15052 776 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms