RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 SLC39A2Q9NP94 309 aa10.73□□□□□ -0.69
TSC1-207ENST00000493467 LTBP4Q8N2S1 1624 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 IGKV6D-41A0A0C4DH26 115 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 SSU72P8A0A1W2PR75 194 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 NKRFO15226 690 aaKnown RBP eCLIP10.72□□□□□ -0.69
TSC1-207ENST00000493467 SLC26A4O43511 780 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 EDIL3O43854 480 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 PDHBP11177 359 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 TNFRSF8P28908 595 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 TXKP42681 527 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 CYP27A1Q02318 531 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 MRPL58Q14197 206 aaKnown RBP10.72□□□□□ -0.69
TSC1-207ENST00000493467 NFIXQ14938 502 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 PDXDC1Q6P996 788 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 CDK5RAP3Q96JB5 506 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 ALS2CR12Q96Q35 445 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 TSG101Q99816 390 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 FAM204AQ9H8W3 233 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 TMEM260Q9NX78 707 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 FAM184BQ9ULE4 1060 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 HYOU1Q9Y4L1 999 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 CAPN6Q9Y6Q1 641 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 KIF13BQ9NQT8 1826 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 ARFGEF1Q9Y6D6 1849 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 MACROD2A1Z1Q3 448 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 RBAK-RBAKDNI3L0D1 243 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 EPHB6O15197 1021 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 SLC37A4O43826 429 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 PLEKP08567 350 aaPredicted RBP10.72□□□□□ -0.69
TSC1-207ENST00000493467 EIF4A3P38919 411 aaKnown RBP10.72□□□□□ -0.69
TSC1-207ENST00000493467 TNNT3P45378 269 aaPredicted RBP10.72□□□□□ -0.69
TSC1-207ENST00000493467 PRSS12P56730 875 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 ECM1Q16610 540 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 CCDC96Q2M329 555 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 ASTE1Q2TB18 679 aaPredicted RBP10.72□□□□□ -0.69
TSC1-207ENST00000493467 ZCWPW2Q504Y3 356 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 HYIQ5T013 277 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 PPP4R3AQ6IN85 833 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 KRT26Q7Z3Y9 468 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 AFAP1L1Q8TED9 768 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 HPS3Q969F9 1004 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 ASB16Q96NS5 453 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 SELENOOQ9BVL4 669 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 NUCKS1Q9H1E3 243 aaKnown RBP10.72□□□□□ -0.69
TSC1-207ENST00000493467 DUSP10Q9Y6W6 482 aa10.72□□□□□ -0.69
TSC1-207ENST00000493467 MYO3BQ8WXR4 1341 aa10.71□□□□□ -0.69
TSC1-207ENST00000493467 LRRC53A6NM62 1247 aa10.71□□□□□ -0.69
TSC1-207ENST00000493467 ZNF185O15231 689 aa10.71□□□□□ -0.69
TSC1-207ENST00000493467 GPSM2P81274 684 aa10.71□□□□□ -0.69
TSC1-207ENST00000493467 C2orf54Q08AI8 447 aa10.71□□□□□ -0.69
TSC1-207ENST00000493467 MTMR2Q13614 643 aa10.71□□□□□ -0.69
TSC1-207ENST00000493467 VPS72Q15906 364 aa10.71□□□□□ -0.69
TSC1-207ENST00000493467 FAM98CQ17RN3 349 aaKnown RBP10.71□□□□□ -0.69
TSC1-207ENST00000493467 KRT79Q5XKE5 535 aa10.71□□□□□ -0.69
TSC1-207ENST00000493467 SRLQ86TD4 932 aa10.71□□□□□ -0.69
TSC1-207ENST00000493467 NOP9Q86U38 636 aaKnown RBP10.71□□□□□ -0.69
TSC1-207ENST00000493467 C2CD5Q86YS7 1000 aa10.71□□□□□ -0.69
TSC1-207ENST00000493467 SNX29Q8TEQ0 813 aa10.71□□□□□ -0.69
TSC1-207ENST00000493467 TBC1D22AQ8WUA7 517 aa10.71□□□□□ -0.69
TSC1-207ENST00000493467 SYN2Q92777 582 aaPredicted RBP10.71□□□□□ -0.69
TSC1-207ENST00000493467 JADE2Q9NQC1 790 aa10.71□□□□□ -0.69
TSC1-207ENST00000493467 TSKSQ9UJT2 592 aa10.71□□□□□ -0.69
TSC1-207ENST00000493467 CLSTN1O94985 981 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 TDP2O95551 362 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 MYBL2P10244 700 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 GABPAQ06546 454 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 SF3B2Q13435 895 aaKnown RBP10.7□□□□□ -0.7
TSC1-207ENST00000493467 SLC51AQ86UW1 340 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 AMIGO3Q86WK7 504 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 RNF10Q8N5U6 811 aaKnown RBP10.7□□□□□ -0.7
TSC1-207ENST00000493467 GOLGA6L1Q8N7Z2 621 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 CNBD1Q8NA66 436 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 EEF2KMTQ96G04 330 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 OSBPL9Q96SU4 736 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 DEF6Q9H4E7 631 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 MLXIPQ9HAP2 919 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 MTMR4Q9NYA4 1195 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 PRKAG2Q9UGJ0 569 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 CCNL1Q9UK58 526 aaPredicted RBP10.7□□□□□ -0.7
TSC1-207ENST00000493467 KDM3AQ9Y4C1 1321 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 MYH7BA7E2Y1 1941 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 G3V3G9 751 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 SCAMP3O14828 347 aaKnown RBP10.7□□□□□ -0.7
TSC1-207ENST00000493467 AKR1B10O60218 316 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 UFL1O94874 794 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 MOCS3O95396 460 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 FBXO45P0C2W1 286 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 GCFC2P16383 781 aaKnown RBP10.7□□□□□ -0.7
TSC1-207ENST00000493467 NCOA4Q13772 614 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 CRY2Q49AN0 593 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 HGSNATQ68CP4 663 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 CC2D2BQ6DHV5 1058 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 NT5DC4Q86YG4 428 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 ZC3H3Q8IXZ2 948 aaKnown RBP10.7□□□□□ -0.7
TSC1-207ENST00000493467 DNAJC19Q96DA6 116 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 CEP63Q96MT8 703 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 NAP1L4Q99733 375 aaKnown RBP10.7□□□□□ -0.7
TSC1-207ENST00000493467 TINF2Q9BSI4 451 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 CRACR2AQ9BSW2 395 aa10.7□□□□□ -0.7
TSC1-207ENST00000493467 FAM207AQ9NSI2 230 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms