RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 GAS7O60861 476 aa15.81■□□□□ 0.12
CCM2-217ENST00000492883 CLTBP09497 229 aa15.81■□□□□ 0.12
CCM2-217ENST00000492883 SYN1P17600 705 aa15.81■□□□□ 0.12
CCM2-217ENST00000492883 PTPN11Q06124 597 aaPredicted RBP15.81■□□□□ 0.12
CCM2-217ENST00000492883 LRCH2Q5VUJ6 765 aa15.81■□□□□ 0.12
CCM2-217ENST00000492883 NOSTRINQ8IVI9 506 aa15.81■□□□□ 0.12
CCM2-217ENST00000492883 FAM126BQ8IXS8 530 aa15.81■□□□□ 0.12
CCM2-217ENST00000492883 SLC5A5Q92911 643 aa15.81■□□□□ 0.12
CCM2-217ENST00000492883 GJA10Q969M2 543 aa15.81■□□□□ 0.12
CCM2-217ENST00000492883 RIT2Q99578 217 aa15.81■□□□□ 0.12
CCM2-217ENST00000492883 SMARCAD1Q9H4L7 1026 aa15.81■□□□□ 0.12
CCM2-217ENST00000492883 AZI2Q9H6S1 392 aa15.81■□□□□ 0.12
CCM2-217ENST00000492883 SAMM50Q9Y512 469 aa15.81■□□□□ 0.12
CCM2-217ENST00000492883 HAS3O00219 553 aa15.8■□□□□ 0.12
CCM2-217ENST00000492883 SLC37A4O43826 429 aa15.8■□□□□ 0.12
CCM2-217ENST00000492883 B4GALT4O60513 344 aa15.8■□□□□ 0.12
CCM2-217ENST00000492883 CCNE2O96020 404 aa15.8■□□□□ 0.12
CCM2-217ENST00000492883 PDCP20941 246 aa15.8■□□□□ 0.12
CCM2-217ENST00000492883 KRT76Q01546 638 aa15.8■□□□□ 0.12
CCM2-217ENST00000492883 FAAP100Q0VG06 881 aa15.8■□□□□ 0.12
CCM2-217ENST00000492883 ZNF746Q6NUN9 644 aaPredicted RBP15.8■□□□□ 0.12
CCM2-217ENST00000492883 MIS18BP1Q6P0N0 1132 aa15.8■□□□□ 0.12
CCM2-217ENST00000492883 TRIM50Q86XT4 487 aa15.8■□□□□ 0.12
CCM2-217ENST00000492883 TEKT3Q9BXF9 490 aa15.8■□□□□ 0.12
CCM2-217ENST00000492883 TRPV6Q9H1D0 765 aa15.8■□□□□ 0.12
CCM2-217ENST00000492883 HDAC6Q9UBN7 1215 aa15.8■□□□□ 0.12
CCM2-217ENST00000492883 NOL7Q9UMY1 257 aaKnown RBP15.8■□□□□ 0.12
CCM2-217ENST00000492883 KIF28PB7ZC32 967 aa15.79■□□□□ 0.12
CCM2-217ENST00000492883 BACH1O14867 736 aa15.79■□□□□ 0.12
CCM2-217ENST00000492883 CHMP2AO43633 222 aa15.79■□□□□ 0.12
CCM2-217ENST00000492883 ATG7O95352 703 aa15.79■□□□□ 0.12
CCM2-217ENST00000492883 BAG4O95429 457 aaKnown RBP15.79■□□□□ 0.12
CCM2-217ENST00000492883 SUPT20HL2P0C7V6 817 aa15.79■□□□□ 0.12
CCM2-217ENST00000492883 U2AF2P26368 475 aaKnown RBP eCLIP15.79■□□□□ 0.12
CCM2-217ENST00000492883 STAT5BP51692 787 aa15.79■□□□□ 0.12
CCM2-217ENST00000492883 SH3RF1Q7Z6J0 888 aa15.79■□□□□ 0.12
CCM2-217ENST00000492883 SMAP1Q8IYB5 467 aaPredicted RBP15.79■□□□□ 0.12
CCM2-217ENST00000492883 ETNPPLQ8TBG4 499 aa15.79■□□□□ 0.12
CCM2-217ENST00000492883 FAM20AQ96MK3 541 aa15.79■□□□□ 0.12
CCM2-217ENST00000492883 PDLIM7Q9NR12 457 aa15.79■□□□□ 0.12
CCM2-217ENST00000492883 TRMT13Q9NUP7 481 aaKnown RBP15.79■□□□□ 0.12
CCM2-217ENST00000492883 ERAP1Q9NZ08 941 aa15.79■□□□□ 0.12
CCM2-217ENST00000492883 NOD1Q9Y239 953 aa15.79■□□□□ 0.12
CCM2-217ENST00000492883 FRMPD3Q5JV73 1810 aa15.79■□□□□ 0.12
CCM2-217ENST00000492883 WDR64B1ANS9 1081 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 TBX3O15119 743 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 LGR5O75473 907 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 PSMD10O75832 226 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 CD4P01730 458 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 PSAPP07602 524 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 MARK3P27448 753 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 MCM7P33993 719 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 PTGISQ16647 500 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 FAM160B1Q5W0V3 765 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 SWSAP1Q6NVH7 229 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 ABHD15Q6UXT9 468 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 SESTD1Q86VW0 696 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 POTEDQ86YR6 584 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 SLFN12Q8IYM2 578 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 LBHD1Q9BQE6 289 aaPredicted RBP15.78■□□□□ 0.12
CCM2-217ENST00000492883 KCNMB3Q9NPA1 279 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 GTF2IRD1Q9UHL9 959 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 PCDHA10Q9Y5I2 948 aa15.78■□□□□ 0.12
CCM2-217ENST00000492883 VPS37CA5D8V6 355 aaPredicted RBP15.77■□□□□ 0.12
CCM2-217ENST00000492883 TRIM43BA6NCK2 446 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 NEMFO60524 1076 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 SMIM10L2AP0DMW4 78 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 SMIM10L2BP0DMW5 78 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 RAG1P15918 1043 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 SFNP31947 248 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 TRAPPC10P48553 1259 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 ZNF174Q15697 407 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 CALCRLQ16602 461 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 TTC38Q5R3I4 469 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 GDF6Q6KF10 455 aaPredicted RBP15.77■□□□□ 0.12
CCM2-217ENST00000492883 PLPPR4Q7Z2D5 763 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 MIER3Q7Z3K6 550 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 TNPO1Q92973 898 aaKnown RBP15.77■□□□□ 0.12
CCM2-217ENST00000492883 TRIM43Q96BQ3 446 aaPredicted RBP15.77■□□□□ 0.12
CCM2-217ENST00000492883 PCYT2Q99447 389 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 UNC45AQ9H3U1 944 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 RNPEPQ9H4A4 650 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 ZNF302Q9NR11 478 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 DISC1Q9NRI5 854 aa15.77■□□□□ 0.12
CCM2-217ENST00000492883 BRCA2P51587 3418 aa15.77■□□□□ 0.11
CCM2-217ENST00000492883 EMSYQ7Z589 1322 aa15.76■□□□□ 0.11
CCM2-217ENST00000492883 IGKV6D-21A0A0A0MT36 114 aa15.76■□□□□ 0.11
CCM2-217ENST00000492883 C17orf102A2RUQ5 167 aa15.76■□□□□ 0.11
CCM2-217ENST00000492883 WNT7AO00755 349 aa15.76■□□□□ 0.11
CCM2-217ENST00000492883 KIAA0355O15063 1070 aa15.76■□□□□ 0.11
CCM2-217ENST00000492883 GNAT1P11488 350 aa15.76■□□□□ 0.11
CCM2-217ENST00000492883 CYP2C9P11712 490 aa15.76■□□□□ 0.11
CCM2-217ENST00000492883 JAK3P52333 1124 aa15.76■□□□□ 0.11
CCM2-217ENST00000492883 PRPF38BQ5VTL8 546 aaKnown RBP15.76■□□□□ 0.11
CCM2-217ENST00000492883 PDXDC2PQ6P474 469 aa15.76■□□□□ 0.11
CCM2-217ENST00000492883 CKAP2LQ8IYA6 745 aa15.76■□□□□ 0.11
CCM2-217ENST00000492883 SPRYD3Q8NCJ5 442 aa15.76■□□□□ 0.11
CCM2-217ENST00000492883 HAS1Q92839 578 aa15.76■□□□□ 0.11
CCM2-217ENST00000492883 PPP1R12CQ9BZL4 782 aa15.76■□□□□ 0.11
CCM2-217ENST00000492883 GABBR1Q9UBS5 961 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms