RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 FBXL18Q96ME1 805 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 CTAGE1Q96RT6 745 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 MLXIPQ9HAP2 919 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 RWDD3Q9Y3V2 267 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 MYH7P12883 1935 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 HAS3O00219 553 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 CAND2O75155 1236 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 TGFB3P10600 412 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 MYCLP12524 364 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 ZP2Q05996 745 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 TRAF1Q13077 416 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 PKN1Q16512 942 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 PLEKHG4Q58EX7 1191 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 TCEAL5Q5H9L2 206 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 SERINC5Q86VE9 423 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 TICAM2Q86XR7 235 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 ADGRF4Q8IZF3 695 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 FIBCD1Q8N539 461 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 TBC1D5Q92609 795 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 APBB2Q92870 758 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 PPP2R3CQ969Q6 453 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 IL17RAQ96F46 866 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 PRRX2Q99811 253 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 IFIH1Q9BYX4 1025 aaKnown RBP11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 VAT1LQ9HCJ6 419 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 PXMP2Q9NR77 195 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 MAP3K20Q9NYL2 800 aaKnown RBP11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 SCN10AQ9Y5Y9 1956 aa11.34□□□□□ -0.59
TNFRSF9-203ENST00000492571 H3BRB1 525 aa11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 NOP56O00567 594 aaKnown RBP11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 ZNF213O14771 459 aa11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 FOXP2O15409 715 aa11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 RB1P06400 928 aa11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 PARP1P09874 1014 aaKnown RBP11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 HAND2P61296 217 aa11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 ZNF200P98182 395 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 TRIM71Q2Q1W2 868 aaKnown RBP11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 ASPRV1Q53RT3 343 aa11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 CELF3Q5SZQ8 465 aaKnown RBP11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 MYSM1Q5VVJ2 828 aa11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 PNMA1Q8ND90 353 aa11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 C11orf84Q9BUA3 381 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 AMNQ9BXJ7 453 aa11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 LMAN2LQ9H0V9 348 aa11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 TUT1Q9H6E5 874 aaKnown RBP11.33□□□□□ -0.6
TNFRSF9-203ENST00000492571 SCN5AQ14524 2016 aa11.32□□□□□ -0.6
TNFRSF9-203ENST00000492571 GGPS1O95749 300 aa11.32□□□□□ -0.6
TNFRSF9-203ENST00000492571 CTNNB1P35222 781 aa11.32□□□□□ -0.6
TNFRSF9-203ENST00000492571 MBTPS1Q14703 1052 aa11.32□□□□□ -0.6
TNFRSF9-203ENST00000492571 TCTN1Q2MV58 587 aa11.32□□□□□ -0.6
TNFRSF9-203ENST00000492571 QRICH1Q2TAL8 776 aa11.32□□□□□ -0.6
TNFRSF9-203ENST00000492571 C20orf194Q5TEA3 1177 aa11.32□□□□□ -0.6
TNFRSF9-203ENST00000492571 TRAF7Q6Q0C0 670 aa11.32□□□□□ -0.6
TNFRSF9-203ENST00000492571 SAMD3Q8N6K7 520 aa11.32□□□□□ -0.6
TNFRSF9-203ENST00000492571 ZKSCAN3Q9BRR0 538 aa11.32□□□□□ -0.6
TNFRSF9-203ENST00000492571 USP26Q9BXU7 913 aa11.32□□□□□ -0.6
TNFRSF9-203ENST00000492571 CPVLQ9H3G5 476 aa11.32□□□□□ -0.6
TNFRSF9-203ENST00000492571 ZMYM6O95789 1325 aa11.32□□□□□ -0.6
TNFRSF9-203ENST00000492571 SORBS3O60504 671 aa11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 CTSHP09668 335 aa11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 CCND2P30279 289 aa11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 SMAD2Q15796 467 aaKnown RBP11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 HSDL1Q3SXM5 330 aa11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 GNPTABQ3T906 1256 aa11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 ANKRD45Q5TZF3 282 aa11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 PPP1R18Q6NYC8 613 aa11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 HFE2Q6ZVN8 426 aa11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 RPAINQ86UA6 219 aa11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 SUGP1Q8IWZ8 645 aaKnown RBP11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 OTUD7AQ8TE49 926 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 WNT8BQ93098 351 aa11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 COL20A1Q9P218 1284 aa11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 ZNF215Q9UL58 517 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 ADGRG1Q9Y653 693 aa11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 CCDC171Q6TFL3 1326 aa11.31□□□□□ -0.6
TNFRSF9-203ENST00000492571 STXBP3O00186 592 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 TREHO43280 583 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 SMIM10L2AP0DMW4 78 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 SMIM10L2BP0DMW5 78 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 HOXD8P13378 290 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 IRS1P35568 1242 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 BMPR1AP36894 532 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 COPS2P61201 443 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 NEDD9Q14511 834 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 HERC4Q5GLZ8 1057 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 RSPH3Q86UC2 560 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 VSIG10LQ86VR7 867 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 FAM227BQ96M60 508 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 ZSCAN10Q96SZ4 725 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 PDCD2LQ9BRP1 358 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 UBAC1Q9BSL1 405 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 C16orf70Q9BSU1 422 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 RNPEPQ9H4A4 650 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 IGFLR1Q9H665 355 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 PCDHA1Q9Y5I3 950 aa11.3□□□□□ -0.6
TNFRSF9-203ENST00000492571 C5orf67F2Z3F1 127 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 GCOM1H8Y6P7 765 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 KDM4AO75164 1064 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 POLR2MP0CAP2 368 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 NDUFV1P49821 464 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms