RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 PTDSS1P48651 473 aaKnown RBP10.57□□□□□ -0.72
VPS8-225ENST00000492449 SULT2A1Q06520 285 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 SLC4A8Q2Y0W8 1093 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 RINLQ6ZS11 566 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 CROCCP2Q86T23 111 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 ZSCAN29Q8IWY8 852 aaPredicted RBP10.57□□□□□ -0.72
VPS8-225ENST00000492449 DIS3L2Q8IYB7 885 aaKnown RBP10.57□□□□□ -0.72
VPS8-225ENST00000492449 ADSSL1Q8N142 457 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 AGGF1Q8N302 714 aaeCLIP10.57□□□□□ -0.72
VPS8-225ENST00000492449 SMC1BQ8NDV3 1235 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 IRGQQ8WZA9 623 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 TBC1D30Q9Y2I9 924 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 THRAP3Q9Y2W1 955 aaKnown RBP10.57□□□□□ -0.72
VPS8-225ENST00000492449 ARL2BPQ9Y2Y0 163 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 RICTORQ6R327 1708 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 E2F6O75461 281 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 BMP15O95972 392 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 OCRLQ01968 901 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 GSTA3Q16772 222 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 ASTE1Q2TB18 679 aaPredicted RBP10.57□□□□□ -0.72
VPS8-225ENST00000492449 CNPY1Q3B7I2 92 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 TNFAIP8L3Q5GJ75 292 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 RNF43Q68DV7 783 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 PDXDC2PQ6P474 469 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 RALYLQ86SE5 291 aaKnown RBP10.57□□□□□ -0.72
VPS8-225ENST00000492449 LRRC43Q8N309 656 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 ZBTB8BQ8NAP8 495 aaPredicted RBP10.57□□□□□ -0.72
VPS8-225ENST00000492449 SYMPKQ92797 1274 aaKnown RBP10.57□□□□□ -0.72
VPS8-225ENST00000492449 PHKBQ93100 1093 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 EPSTI1Q96J88 318 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 SPATA16Q9BXB7 569 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 FAM217BQ9NTX9 383 aaPredicted RBP10.57□□□□□ -0.72
VPS8-225ENST00000492449 INTS9Q9NV88 658 aaKnown RBP10.57□□□□□ -0.72
VPS8-225ENST00000492449 CHD4Q14839 1912 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 NRXN3Q9Y4C0 1643 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 MBD4O95243 580 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 SHBGP04278 402 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 ACVR2BQ13705 512 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 SGMS1Q86VZ5 419 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 COL23A1Q86Y22 540 aaPredicted RBP10.56□□□□□ -0.72
VPS8-225ENST00000492449 RAB11FIP4Q86YS3 637 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 RNF168Q8IYW5 571 aaPredicted RBP10.56□□□□□ -0.72
VPS8-225ENST00000492449 TUBGCP4Q9UGJ1 667 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 MAPK8IP1Q9UQF2 711 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 WNK3Q9BYP7 1800 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 USP54Q70EL1 1684 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 LMTK3Q96Q04 1460 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 USP6P35125 1406 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 COBLO75128 1261 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 AGTP01019 485 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 PRCPP42785 496 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 CACNA2D1P54289 1103 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 BPIFB4P59827 614 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 PTPN12Q05209 780 aaKnown RBP10.56□□□□□ -0.72
VPS8-225ENST00000492449 SSRP1Q08945 709 aaKnown RBP10.56□□□□□ -0.72
VPS8-225ENST00000492449 ZNF365Q70YC5 407 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 ARMCX6Q7L4S7 300 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 UCMAQ8WVF2 138 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 DYDC1Q8WWB3 177 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 INPP5DQ92835 1189 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 NEUROD6Q96NK8 337 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 PRMT1Q99873 361 aaKnown RBP10.56□□□□□ -0.72
VPS8-225ENST00000492449 TMEM109Q9BVC6 243 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 MTFR1LQ9H019 292 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 MIS12Q9H081 205 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 CARD9Q9H257 536 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 PCDH18Q9HCL0 1135 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 TXLNGQ9NUQ3 528 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 AFDNP55196 1824 aaKnown RBP10.56□□□□□ -0.72
VPS8-225ENST00000492449 MYH4Q9Y623 1939 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 TJP3O95049 919 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 PLEKP08567 350 aaPredicted RBP10.56□□□□□ -0.72
VPS8-225ENST00000492449 VIL1P09327 827 aaKnown RBP10.56□□□□□ -0.72
VPS8-225ENST00000492449 FLT3P36888 993 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 VHLP40337 213 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 GJA8P48165 433 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 MCL1Q07820 350 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 TMEM62Q0P6H9 643 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 DAB2IPQ5VWQ8 1189 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 FITM2Q8N6M3 262 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 ACTRT1Q8TDG2 376 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.56□□□□□ -0.72
VPS8-225ENST00000492449 PPP2R3CQ969Q6 453 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 DPH5Q9H2P9 285 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 PICK1Q9NRD5 415 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 CCDC87Q9NVE4 849 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 MAGEC2Q9UBF1 373 aaPredicted RBP10.56□□□□□ -0.72
VPS8-225ENST00000492449 USP20Q9Y2K6 914 aa10.56□□□□□ -0.72
VPS8-225ENST00000492449 TECPR2O15040 1411 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 SSU72P8A0A1W2PR75 194 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 NVLO15381 856 aaKnown RBP10.55□□□□□ -0.72
VPS8-225ENST00000492449 SKIP12755 728 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 IFNAR1P17181 557 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 EIF4A3P38919 411 aaKnown RBP10.55□□□□□ -0.72
VPS8-225ENST00000492449 MAGEA1P43355 309 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 KPNB1Q14974 876 aaKnown RBP10.55□□□□□ -0.72
VPS8-225ENST00000492449 CHADLQ6NUI6 762 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 ARHGAP27Q6ZUM4 889 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 EXOC3L1Q86VI1 746 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 LONP2Q86WA8 852 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 276.4 ms