RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 FAM26DQ5JW98 314 aa16.16■□□□□ 0.18
ATG4B-222ENST00000491867 GPATCH4Q5T3I0 446 aaKnown RBP16.16■□□□□ 0.18
ATG4B-222ENST00000491867 VPS53Q5VIR6 699 aa16.16■□□□□ 0.18
ATG4B-222ENST00000491867 P2RX5Q93086 422 aa16.16■□□□□ 0.18
ATG4B-222ENST00000491867 ZNF689Q96CS4 500 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-222ENST00000491867 RIPOR3Q96MK2 946 aa16.16■□□□□ 0.18
ATG4B-222ENST00000491867 SETD4Q9NVD3 440 aa16.16■□□□□ 0.18
ATG4B-222ENST00000491867 PCDHGC5Q9Y5F6 944 aa16.16■□□□□ 0.18
ATG4B-222ENST00000491867 MRPL42Q9Y6G3 142 aaKnown RBP16.16■□□□□ 0.18
ATG4B-222ENST00000491867 MYO10Q9HD67 2058 aa16.15■□□□□ 0.18
ATG4B-222ENST00000491867 ENPP3O14638 875 aa16.15■□□□□ 0.18
ATG4B-222ENST00000491867 CHRNA1P02708 482 aa16.15■□□□□ 0.18
ATG4B-222ENST00000491867 GNAT1P11488 350 aa16.15■□□□□ 0.18
ATG4B-222ENST00000491867 ATF7P17544 494 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-222ENST00000491867 UBA1P22314 1058 aaKnown RBP16.15■□□□□ 0.18
ATG4B-222ENST00000491867 KCNV1Q6PIU1 500 aa16.15■□□□□ 0.18
ATG4B-222ENST00000491867 ZBTB33Q86T24 672 aa16.15■□□□□ 0.18
ATG4B-222ENST00000491867 KLHL23Q8NBE8 558 aa16.15■□□□□ 0.18
ATG4B-222ENST00000491867 TTC14Q96N46 770 aa16.15■□□□□ 0.18
ATG4B-222ENST00000491867 TLE6Q9H808 572 aa16.15■□□□□ 0.18
ATG4B-222ENST00000491867 MLXIPQ9HAP2 919 aa16.15■□□□□ 0.18
ATG4B-222ENST00000491867 MRPL11Q9Y3B7 192 aaKnown RBP16.15■□□□□ 0.18
ATG4B-222ENST00000491867 DGKIO75912 1065 aa16.14■□□□□ 0.17
ATG4B-222ENST00000491867 CFBP00751 764 aa16.14■□□□□ 0.17
ATG4B-222ENST00000491867 RBM10P98175 930 aaKnown RBP16.14■□□□□ 0.17
ATG4B-222ENST00000491867 NAALADL2Q58DX5 795 aa16.14■□□□□ 0.17
ATG4B-222ENST00000491867 FRMD5Q7Z6J6 570 aa16.14■□□□□ 0.17
ATG4B-222ENST00000491867 ADGRF4Q8IZF3 695 aa16.14■□□□□ 0.17
ATG4B-222ENST00000491867 POF1BQ8WVV4 589 aa16.14■□□□□ 0.17
ATG4B-222ENST00000491867 SUSD6Q92537 303 aa16.14■□□□□ 0.17
ATG4B-222ENST00000491867 GPKOWQ92917 476 aaPredicted RBP eCLIP16.14■□□□□ 0.17
ATG4B-222ENST00000491867 PDCD2LQ9BRP1 358 aa16.14■□□□□ 0.17
ATG4B-222ENST00000491867 BCAS3Q9H6U6 928 aa16.14■□□□□ 0.17
ATG4B-222ENST00000491867 ARHGAP4P98171 946 aa16.13■□□□□ 0.17
ATG4B-222ENST00000491867 LPIN1Q14693 890 aa16.13■□□□□ 0.17
ATG4B-222ENST00000491867 ALX1Q15699 326 aa16.13■□□□□ 0.17
ATG4B-222ENST00000491867 QRICH1Q2TAL8 776 aa16.13■□□□□ 0.17
ATG4B-222ENST00000491867 ADSSL1Q8N142 457 aa16.13■□□□□ 0.17
ATG4B-222ENST00000491867 TMEM105Q8N8V8 129 aa16.13■□□□□ 0.17
ATG4B-222ENST00000491867 IL31RAQ8NI17 732 aa16.13■□□□□ 0.17
ATG4B-222ENST00000491867 NKD2Q969F2 451 aaPredicted RBP16.13■□□□□ 0.17
ATG4B-222ENST00000491867 EHMT1Q9H9B1 1298 aa16.13■□□□□ 0.17
ATG4B-222ENST00000491867 SUPT16HQ9Y5B9 1047 aaKnown RBP16.13■□□□□ 0.17
ATG4B-222ENST00000491867 DNAH14Q0VDD8 3507 aa16.13■□□□□ 0.17
ATG4B-222ENST00000491867 KMT2BQ9UMN6 2715 aaPredicted RBP16.13■□□□□ 0.17
ATG4B-222ENST00000491867 CCDC171Q6TFL3 1326 aa16.13■□□□□ 0.17
ATG4B-222ENST00000491867 NOP56O00567 594 aaKnown RBP16.12■□□□□ 0.17
ATG4B-222ENST00000491867 PER2O15055 1255 aa16.12■□□□□ 0.17
ATG4B-222ENST00000491867 TGFB3P10600 412 aa16.12■□□□□ 0.17
ATG4B-222ENST00000491867 PAN2Q504Q3 1202 aaKnown RBP16.12■□□□□ 0.17
ATG4B-222ENST00000491867 VSIG10LQ86VR7 867 aa16.12■□□□□ 0.17
ATG4B-222ENST00000491867 TRIM50Q86XT4 487 aa16.12■□□□□ 0.17
ATG4B-222ENST00000491867 CMTR2Q8IYT2 770 aaKnown RBP16.12■□□□□ 0.17
ATG4B-222ENST00000491867 KREMEN2Q8NCW0 462 aa16.12■□□□□ 0.17
ATG4B-222ENST00000491867 VN1R2Q8NFZ6 395 aa16.12■□□□□ 0.17
ATG4B-222ENST00000491867 LMBR1Q8WVP7 490 aa16.12■□□□□ 0.17
ATG4B-222ENST00000491867 ZFP91Q96JP5 570 aaPredicted RBP16.12■□□□□ 0.17
ATG4B-222ENST00000491867 USP26Q9BXU7 913 aa16.12■□□□□ 0.17
ATG4B-222ENST00000491867 DCTPP1Q9H773 170 aa16.12■□□□□ 0.17
ATG4B-222ENST00000491867 CHD6Q8TD26 2715 aa16.12■□□□□ 0.17
ATG4B-222ENST00000491867 CHD8Q9HCK8 2581 aa16.11■□□□□ 0.17
ATG4B-222ENST00000491867 OPLAHO14841 1288 aa16.11■□□□□ 0.17
ATG4B-222ENST00000491867 DHX16O60231 1041 aaKnown RBP16.11■□□□□ 0.17
ATG4B-222ENST00000491867 PPFIA3O75145 1194 aa16.11■□□□□ 0.17
ATG4B-222ENST00000491867 FGAP02671 866 aa16.11■□□□□ 0.17
ATG4B-222ENST00000491867 SP100P23497 879 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-222ENST00000491867 HSD17B4P51659 736 aa16.11■□□□□ 0.17
ATG4B-222ENST00000491867 ADAM17P78536 824 aa16.11■□□□□ 0.17
ATG4B-222ENST00000491867 MICAL1Q8TDZ2 1067 aa16.11■□□□□ 0.17
ATG4B-222ENST00000491867 ATP8B4Q8TF62 1192 aa16.11■□□□□ 0.17
ATG4B-222ENST00000491867 VAT1LQ9HCJ6 419 aa16.11■□□□□ 0.17
ATG4B-222ENST00000491867 KAT6AQ92794 2004 aa16.11■□□□□ 0.17
ATG4B-222ENST00000491867 HAND2P61296 217 aa16.1■□□□□ 0.17
ATG4B-222ENST00000491867 PGM5Q15124 567 aa16.1■□□□□ 0.17
ATG4B-222ENST00000491867 RUFY4Q6ZNE9 571 aa16.1■□□□□ 0.17
ATG4B-222ENST00000491867 STOX1Q6ZVD7 989 aa16.1■□□□□ 0.17
ATG4B-222ENST00000491867 PI4K2BQ8TCG2 481 aa16.1■□□□□ 0.17
ATG4B-222ENST00000491867 NEK1Q96PY6 1258 aa16.1■□□□□ 0.17
ATG4B-222ENST00000491867 OTOGLQ3ZCN5 2332 aa16.1■□□□□ 0.17
ATG4B-222ENST00000491867 MYH6P13533 1939 aa16.09■□□□□ 0.17
ATG4B-222ENST00000491867 CCND2P30279 289 aa16.09■□□□□ 0.17
ATG4B-222ENST00000491867 HOXA13P31271 388 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-222ENST00000491867 MGAT3Q09327 533 aa16.09■□□□□ 0.17
ATG4B-222ENST00000491867 UTP14CQ5TAP6 766 aaKnown RBP16.09■□□□□ 0.17
ATG4B-222ENST00000491867 PNMA1Q8ND90 353 aa16.09■□□□□ 0.17
ATG4B-222ENST00000491867 LINC01599Q8WXQ3 324 aa16.09■□□□□ 0.17
ATG4B-222ENST00000491867 ZKSCAN3Q9BRR0 538 aa16.09■□□□□ 0.17
ATG4B-222ENST00000491867 JMJD4Q9H9V9 463 aa16.09■□□□□ 0.17
ATG4B-222ENST00000491867 TSHZ2Q9NRE2 1034 aa16.09■□□□□ 0.17
ATG4B-222ENST00000491867 GPR179Q6PRD1 2367 aa16.09■□□□□ 0.17
ATG4B-222ENST00000491867 TTC41PQ6P2S7 1318 aa16.09■□□□□ 0.17
ATG4B-222ENST00000491867 MED19A0JLT2 244 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-222ENST00000491867 BRD1O95696 1058 aa16.08■□□□□ 0.16
ATG4B-222ENST00000491867 GATMP50440 423 aa16.08■□□□□ 0.16
ATG4B-222ENST00000491867 GHRHRQ02643 423 aa16.08■□□□□ 0.16
ATG4B-222ENST00000491867 DUSP6Q16828 381 aa16.08■□□□□ 0.16
ATG4B-222ENST00000491867 FBXO47Q5MNV8 452 aa16.08■□□□□ 0.16
ATG4B-222ENST00000491867 MCTP2Q6DN12 878 aa16.08■□□□□ 0.16
ATG4B-222ENST00000491867 ASTLQ6HA08 431 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-222ENST00000491867 MFSD6Q6ZSS7 791 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms