RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 RTEL1Q9NZ71 1219 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 MTCH2Q9Y6C9 303 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 TCF7P36402 384 aaPredicted RBP10.02□□□□□ -0.81
NUP50-217ENST00000491860 FGD1P98174 961 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 SEMA3FQ13275 785 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 AP3B2Q13367 1082 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 RTN1Q16799 776 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 TMEM31Q5JXX7 168 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 UTP14CQ5TAP6 766 aaKnown RBP10.02□□□□□ -0.81
NUP50-217ENST00000491860 TRAF7Q6Q0C0 670 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 APOA5Q6Q788 366 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 ARNTL2Q8WYA1 636 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 GPKOWQ92917 476 aaPredicted RBP eCLIP10.02□□□□□ -0.81
NUP50-217ENST00000491860 EPHX3Q9H6B9 360 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 AZI2Q9H6S1 392 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 RIC8AQ9NPQ8 531 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 JADE2Q9NQC1 790 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 PCDHA6Q9UN73 950 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 PCDHA8Q9Y5H6 950 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 UBIAD1Q9Y5Z9 338 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 NFASCO94856 1347 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 PRRC2BQ5JSZ5 2229 aaKnown RBP10.02□□□□□ -0.81
NUP50-217ENST00000491860 DOCK5Q9H7D0 1870 aa10.02□□□□□ -0.81
NUP50-217ENST00000491860 PTPRSQ13332 1948 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 RRN3P2A6NIE6 340 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 TREHO43280 583 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 SORBS3O60504 671 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 KCNA2P16389 499 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 SLC26A2P50443 739 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 ADCY7P51828 1080 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 NAPAP54920 295 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 ERVK-21P61565 698 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 ARHGAP4P98171 946 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 ZNF200P98182 395 aaPredicted RBP10.01□□□□□ -0.81
NUP50-217ENST00000491860 EXOSC10Q01780 885 aaKnown RBP10.01□□□□□ -0.81
NUP50-217ENST00000491860 GPNMBQ14956 572 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 SKIV2LQ15477 1246 aaKnown RBP10.01□□□□□ -0.81
NUP50-217ENST00000491860 FAM26DQ5JW98 314 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 MICALL1Q8N3F8 863 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 DBF4BQ8NFT6 615 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 GLG1Q92896 1179 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 SDF4Q9BRK5 362 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 JPH1Q9HDC5 661 aaPredicted RBP10.01□□□□□ -0.81
NUP50-217ENST00000491860 CNTNAP5Q8WYK1 1306 aa10.01□□□□□ -0.81
NUP50-217ENST00000491860 SIP14410 1827 aa10□□□□□ -0.81
NUP50-217ENST00000491860 COL4A6Q14031 1691 aa10□□□□□ -0.81
NUP50-217ENST00000491860 GOLGA8AA7E2F4 631 aa10□□□□□ -0.81
NUP50-217ENST00000491860 GOLGA8BA8MQT2 603 aa10□□□□□ -0.81
NUP50-217ENST00000491860 M0QZ92 97 aa10□□□□□ -0.81
NUP50-217ENST00000491860 EPB41L2O43491 1005 aaKnown RBP10□□□□□ -0.81
NUP50-217ENST00000491860 REC8O95072 547 aa10□□□□□ -0.81
NUP50-217ENST00000491860 ITGB5P18084 799 aa10□□□□□ -0.81
NUP50-217ENST00000491860 RXRAP19793 462 aa10□□□□□ -0.81
NUP50-217ENST00000491860 ADAM17P78536 824 aa10□□□□□ -0.81
NUP50-217ENST00000491860 DEFB103AP81534 67 aa10□□□□□ -0.81
NUP50-217ENST00000491860 HTRA4P83105 476 aaPredicted RBP10□□□□□ -0.81
NUP50-217ENST00000491860 PPFIA1Q13136 1202 aa10□□□□□ -0.81
NUP50-217ENST00000491860 PTPROQ16827 1216 aa10□□□□□ -0.81
NUP50-217ENST00000491860 NIPA1Q7RTP0 329 aa10□□□□□ -0.81
NUP50-217ENST00000491860 PLPPR4Q7Z2D5 763 aa10□□□□□ -0.81
NUP50-217ENST00000491860 CCDC82Q8N4S0 544 aa10□□□□□ -0.81
NUP50-217ENST00000491860 LMBR1Q8WVP7 490 aa10□□□□□ -0.81
NUP50-217ENST00000491860 ZFP91Q96JP5 570 aaPredicted RBP10□□□□□ -0.81
NUP50-217ENST00000491860 MXRA8Q9BRK3 442 aa10□□□□□ -0.81
NUP50-217ENST00000491860 LRRC2Q9BYS8 371 aa10□□□□□ -0.81
NUP50-217ENST00000491860 C11orf16Q9NQ32 467 aa10□□□□□ -0.81
NUP50-217ENST00000491860 SETD4Q9NVD3 440 aa10□□□□□ -0.81
NUP50-217ENST00000491860 RNF216Q9NWF9 866 aaPredicted RBP10□□□□□ -0.81
NUP50-217ENST00000491860 BARHL2Q9NY43 387 aa10□□□□□ -0.81
NUP50-217ENST00000491860 SLC9A2Q9UBY0 812 aa10□□□□□ -0.81
NUP50-217ENST00000491860 TUBE1Q9UJT0 475 aa10□□□□□ -0.81
NUP50-217ENST00000491860 RWDD3Q9Y3V2 267 aa10□□□□□ -0.81
NUP50-217ENST00000491860 SQORQ9Y6N5 450 aa10□□□□□ -0.81
NUP50-217ENST00000491860 PIEZO1Q92508 2521 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 KLF18A0A0U1RQI7 1052 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 MBLAC1A4D2B0 266 aaPredicted RBP9.99□□□□□ -0.81
NUP50-217ENST00000491860 SMCO2A6NFE2 343 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 PSMA5P28066 241 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 ZNF76P36508 570 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 METAP2P50579 478 aaKnown RBP eCLIP9.99□□□□□ -0.81
NUP50-217ENST00000491860 AKAP17AQ02040 695 aaKnown RBP9.99□□□□□ -0.81
NUP50-217ENST00000491860 SP4Q02446 784 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 GRB10Q13322 594 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 MKRN4PQ13434 485 aaPredicted RBP9.99□□□□□ -0.81
NUP50-217ENST00000491860 HIC1Q14526 733 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 MBTPS1Q14703 1052 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 GRIK4Q16099 956 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 UBE2SQ16763 222 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 CEP55Q53EZ4 464 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 IER5Q5VY09 327 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 WWC2Q6AWC2 1192 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 MYOCDQ8IZQ8 938 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 CMTR1Q8N1G2 835 aaKnown RBP9.99□□□□□ -0.81
NUP50-217ENST00000491860 NME8Q8N427 588 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 FBXL16Q8N461 479 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 BICD2Q8TD16 824 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 SP7Q8TDD2 431 aaPredicted RBP9.99□□□□□ -0.81
NUP50-217ENST00000491860 WNT8BQ93098 351 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 HLA-CQ95604 372 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 TOP1MTQ969P6 601 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms