RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 GPR20Q99678 358 aa16.73■□□□□ 0.27
SSR4-212ENST00000491833 RC3H2Q9HBD1 1191 aaKnown RBP16.73■□□□□ 0.27
SSR4-212ENST00000491833 PALM3A6NDB9 673 aaPredicted RBP16.72■□□□□ 0.27
SSR4-212ENST00000491833 HIP1O00291 1037 aa16.72■□□□□ 0.27
SSR4-212ENST00000491833 GRM6O15303 877 aa16.72■□□□□ 0.27
SSR4-212ENST00000491833 FIBPO43427 364 aa16.72■□□□□ 0.27
SSR4-212ENST00000491833 MMP1P03956 469 aa16.72■□□□□ 0.27
SSR4-212ENST00000491833 LINC00271P0C7V0 271 aa16.72■□□□□ 0.27
SSR4-212ENST00000491833 GHRP10912 638 aa16.72■□□□□ 0.27
SSR4-212ENST00000491833 BMPR1AP36894 532 aa16.72■□□□□ 0.27
SSR4-212ENST00000491833 SEC23AQ15436 765 aa16.72■□□□□ 0.27
SSR4-212ENST00000491833 HERC4Q5GLZ8 1057 aaPredicted RBP16.72■□□□□ 0.27
SSR4-212ENST00000491833 UTP14CQ5TAP6 766 aaKnown RBP16.72■□□□□ 0.27
SSR4-212ENST00000491833 BCAS3Q9H6U6 928 aa16.72■□□□□ 0.27
SSR4-212ENST00000491833 MUTYHQ9UIF7 546 aa16.72■□□□□ 0.27
SSR4-212ENST00000491833 NRCAMQ92823 1304 aa16.71■□□□□ 0.27
SSR4-212ENST00000491833 TBX10O75333 385 aa16.71■□□□□ 0.27
SSR4-212ENST00000491833 CSPG5O95196 566 aa16.71■□□□□ 0.27
SSR4-212ENST00000491833 ADAM17P78536 824 aa16.71■□□□□ 0.27
SSR4-212ENST00000491833 MRPS9P82933 396 aaKnown RBP16.71■□□□□ 0.27
SSR4-212ENST00000491833 DLX2Q07687 328 aaPredicted RBP16.71■□□□□ 0.27
SSR4-212ENST00000491833 TAF2Q6P1X5 1199 aa16.71■□□□□ 0.27
SSR4-212ENST00000491833 CLP1Q92989 425 aaKnown RBP16.71■□□□□ 0.27
SSR4-212ENST00000491833 ZNF318Q5VUA4 2279 aa16.71■□□□□ 0.27
SSR4-212ENST00000491833 SPATA31C2B4DYI2 1134 aa16.7■□□□□ 0.26
SSR4-212ENST00000491833 SP4Q02446 784 aa16.7■□□□□ 0.26
SSR4-212ENST00000491833 SEMA3FQ13275 785 aa16.7■□□□□ 0.26
SSR4-212ENST00000491833 BTG3Q14201 252 aaPredicted RBP16.7■□□□□ 0.26
SSR4-212ENST00000491833 GRM4Q14833 912 aa16.7■□□□□ 0.26
SSR4-212ENST00000491833 RSPH3Q86UC2 560 aa16.7■□□□□ 0.26
SSR4-212ENST00000491833 RNF135Q8IUD6 432 aa16.7■□□□□ 0.26
SSR4-212ENST00000491833 PPP2R3CQ969Q6 453 aa16.7■□□□□ 0.26
SSR4-212ENST00000491833 PLVAPQ9BX97 442 aa16.7■□□□□ 0.26
SSR4-212ENST00000491833 RIOX1Q9H6W3 641 aa16.7■□□□□ 0.26
SSR4-212ENST00000491833 CD207Q9UJ71 328 aa16.7■□□□□ 0.26
SSR4-212ENST00000491833 PNMA6FA0A0J9YX94 578 aa16.69■□□□□ 0.26
SSR4-212ENST00000491833 STXBP3O00186 592 aa16.69■□□□□ 0.26
SSR4-212ENST00000491833 CHRNA1P02708 482 aa16.69■□□□□ 0.26
SSR4-212ENST00000491833 NDUFV1P49821 464 aa16.69■□□□□ 0.26
SSR4-212ENST00000491833 MGAT3Q09327 533 aa16.69■□□□□ 0.26
SSR4-212ENST00000491833 SLC35G1Q2M3R5 365 aa16.69■□□□□ 0.26
SSR4-212ENST00000491833 CYB5R4Q7L1T6 521 aa16.69■□□□□ 0.26
SSR4-212ENST00000491833 ZNF689Q96CS4 500 aaPredicted RBP16.69■□□□□ 0.26
SSR4-212ENST00000491833 OSBPL3Q9H4L5 887 aa16.69■□□□□ 0.26
SSR4-212ENST00000491833 IGFLR1Q9H665 355 aa16.69■□□□□ 0.26
SSR4-212ENST00000491833 EHMT1Q9H9B1 1298 aa16.69■□□□□ 0.26
SSR4-212ENST00000491833 RTEL1Q9NZ71 1219 aa16.69■□□□□ 0.26
SSR4-212ENST00000491833 KIAA1671Q9BY89 1806 aa16.68■□□□□ 0.26
SSR4-212ENST00000491833 ERICH2A1L162 156 aa16.68■□□□□ 0.26
SSR4-212ENST00000491833 LINC01565O15544 149 aa16.68■□□□□ 0.26
SSR4-212ENST00000491833 GTF2F1P35269 517 aaKnown RBP eCLIP16.68■□□□□ 0.26
SSR4-212ENST00000491833 IRX6P78412 446 aaPredicted RBP16.68■□□□□ 0.26
SSR4-212ENST00000491833 TRDNQ13061 729 aa16.68■□□□□ 0.26
SSR4-212ENST00000491833 PPFIA1Q13136 1202 aa16.68■□□□□ 0.26
SSR4-212ENST00000491833 LPIN1Q14693 890 aa16.68■□□□□ 0.26
SSR4-212ENST00000491833 RUFY4Q6ZNE9 571 aa16.68■□□□□ 0.26
SSR4-212ENST00000491833 PLEKHM2Q8IWE5 1019 aa16.68■□□□□ 0.26
SSR4-212ENST00000491833 GIMAP8Q8ND71 665 aaPredicted RBP16.68■□□□□ 0.26
SSR4-212ENST00000491833 P2RX5Q93086 422 aa16.68■□□□□ 0.26
SSR4-212ENST00000491833 SENP7Q9BQF6 1050 aa16.68■□□□□ 0.26
SSR4-212ENST00000491833 TUBE1Q9UJT0 475 aa16.68■□□□□ 0.26
SSR4-212ENST00000491833 KAT6AQ92794 2004 aa16.67■□□□□ 0.26
SSR4-212ENST00000491833 CYTH3O43739 400 aa16.67■□□□□ 0.26
SSR4-212ENST00000491833 DGKIO75912 1065 aa16.67■□□□□ 0.26
SSR4-212ENST00000491833 TCF7P36402 384 aaPredicted RBP16.67■□□□□ 0.26
SSR4-212ENST00000491833 FBXO47Q5MNV8 452 aa16.67■□□□□ 0.26
SSR4-212ENST00000491833 PCNX4Q63HM2 1172 aa16.67■□□□□ 0.26
SSR4-212ENST00000491833 B4GALNT3Q6L9W6 998 aa16.67■□□□□ 0.26
SSR4-212ENST00000491833 TSHZ1Q6ZSZ6 1077 aa16.67■□□□□ 0.26
SSR4-212ENST00000491833 NLRX1Q86UT6 975 aa16.67■□□□□ 0.26
SSR4-212ENST00000491833 SMARCC2Q8TAQ2 1214 aa16.67■□□□□ 0.26
SSR4-212ENST00000491833 EDAQ92838 391 aa16.67■□□□□ 0.26
SSR4-212ENST00000491833 CUL5Q93034 780 aa16.67■□□□□ 0.26
SSR4-212ENST00000491833 ALG13Q9NP73 1137 aaKnown RBP16.67■□□□□ 0.26
SSR4-212ENST00000491833 TELO2Q9Y4R8 837 aa16.67■□□□□ 0.26
SSR4-212ENST00000491833 MYO7AQ13402 2215 aa16.67■□□□□ 0.26
SSR4-212ENST00000491833 ENPP3O14638 875 aa16.66■□□□□ 0.26
SSR4-212ENST00000491833 ADAM15Q13444 863 aa16.66■□□□□ 0.26
SSR4-212ENST00000491833 GRIK4Q16099 956 aa16.66■□□□□ 0.26
SSR4-212ENST00000491833 XRRA1Q6P2D8 792 aa16.66■□□□□ 0.26
SSR4-212ENST00000491833 CHD1LQ86WJ1 897 aa16.66■□□□□ 0.26
SSR4-212ENST00000491833 SMC5Q8IY18 1101 aa16.66■□□□□ 0.26
SSR4-212ENST00000491833 CDY2AQ9Y6F7 541 aa16.66■□□□□ 0.26
SSR4-212ENST00000491833 TTC3P53804 2025 aa16.65■□□□□ 0.26
SSR4-212ENST00000491833 IFIT3O14879 490 aaKnown RBP16.65■□□□□ 0.26
SSR4-212ENST00000491833 EYA4O95677 639 aa16.65■□□□□ 0.26
SSR4-212ENST00000491833 RPLP2P05387 115 aaKnown RBP16.65■□□□□ 0.26
SSR4-212ENST00000491833 PTPN5P54829 565 aa16.65■□□□□ 0.26
SSR4-212ENST00000491833 WTAPQ15007 396 aa16.65■□□□□ 0.26
SSR4-212ENST00000491833 NAALADL2Q58DX5 795 aa16.65■□□□□ 0.26
SSR4-212ENST00000491833 BMP8AQ7Z5Y6 402 aa16.65■□□□□ 0.26
SSR4-212ENST00000491833 CMTR2Q8IYT2 770 aaKnown RBP16.65■□□□□ 0.26
SSR4-212ENST00000491833 PRSS33Q8NF86 280 aa16.65■□□□□ 0.26
SSR4-212ENST00000491833 DNAJB3Q8WWF6 145 aa16.65■□□□□ 0.26
SSR4-212ENST00000491833 MSLNLQ96KJ4 702 aa16.65■□□□□ 0.26
SSR4-212ENST00000491833 PRRX2Q99811 253 aa16.65■□□□□ 0.26
SSR4-212ENST00000491833 ERAP1Q9NZ08 941 aa16.65■□□□□ 0.26
SSR4-212ENST00000491833 PLAGL2Q9UPG8 496 aa16.65■□□□□ 0.26
SSR4-212ENST00000491833 MRPL42Q9Y6G3 142 aaKnown RBP16.65■□□□□ 0.26
SSR4-212ENST00000491833 TECTAO75443 2155 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms