RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 MYOCDQ8IZQ8 938 aa12.9□□□□□ -0.34
NCSTN-214ENST00000491390 SMRP1Q8NCR6 262 aa12.9□□□□□ -0.34
NCSTN-214ENST00000491390 TOP1MTQ969P6 601 aa12.9□□□□□ -0.34
NCSTN-214ENST00000491390 IWS1Q96ST2 819 aa12.9□□□□□ -0.34
NCSTN-214ENST00000491390 OSBPL7Q9BZF2 842 aa12.9□□□□□ -0.34
NCSTN-214ENST00000491390 BCAS3Q9H6U6 928 aa12.9□□□□□ -0.34
NCSTN-214ENST00000491390 EMSYQ7Z589 1322 aa12.89□□□□□ -0.35
NCSTN-214ENST00000491390 MED19A0JLT2 244 aaPredicted RBP12.89□□□□□ -0.35
NCSTN-214ENST00000491390 F2P00734 622 aa12.89□□□□□ -0.35
NCSTN-214ENST00000491390 SP2Q02086 613 aa12.89□□□□□ -0.35
NCSTN-214ENST00000491390 HSDL1Q3SXM5 330 aa12.89□□□□□ -0.35
NCSTN-214ENST00000491390 PLEKHG4Q58EX7 1191 aa12.89□□□□□ -0.35
NCSTN-214ENST00000491390 CHD1LQ86WJ1 897 aa12.89□□□□□ -0.35
NCSTN-214ENST00000491390 HOMER1Q86YM7 354 aa12.89□□□□□ -0.35
NCSTN-214ENST00000491390 SMC5Q8IY18 1101 aa12.89□□□□□ -0.35
NCSTN-214ENST00000491390 DBF4BQ8NFT6 615 aa12.89□□□□□ -0.35
NCSTN-214ENST00000491390 PIBF1Q8WXW3 757 aa12.89□□□□□ -0.35
NCSTN-214ENST00000491390 SPATA33Q96N06 139 aa12.89□□□□□ -0.35
NCSTN-214ENST00000491390 SENP2Q9HC62 589 aa12.89□□□□□ -0.35
NCSTN-214ENST00000491390 CLEC1BQ9P126 229 aa12.89□□□□□ -0.35
NCSTN-214ENST00000491390 ANKRD11Q6UB99 2663 aaPredicted RBP12.89□□□□□ -0.35
NCSTN-214ENST00000491390 KLRF2D3W0D1 207 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 HAS3O00219 553 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 GRM6O15303 877 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 EIF3JO75822 258 aaKnown RBP12.88□□□□□ -0.35
NCSTN-214ENST00000491390 GGPS1O95749 300 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 RB1P06400 928 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 NEFLP07196 543 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 HSD17B4P51659 736 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 COASYQ13057 564 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 CAMK1Q14012 370 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 IFIT1BQ5T764 474 aaKnown RBP12.88□□□□□ -0.35
NCSTN-214ENST00000491390 FCHSD1Q86WN1 690 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 PPTC7Q8NI37 304 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 YME1L1Q96TA2 773 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 PDCD2LQ9BRP1 358 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 UBAC1Q9BSL1 405 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 AMNQ9BXJ7 453 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 RC3H2Q9HBD1 1191 aaKnown RBP12.88□□□□□ -0.35
NCSTN-214ENST00000491390 MAD2L2Q9UI95 211 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 TELO2Q9Y4R8 837 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 DOCK5Q9H7D0 1870 aa12.88□□□□□ -0.35
NCSTN-214ENST00000491390 ATRXP46100 2492 aa12.87□□□□□ -0.35
NCSTN-214ENST00000491390 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.87□□□□□ -0.35
NCSTN-214ENST00000491390 PDGFBP01127 241 aaPredicted RBP12.87□□□□□ -0.35
NCSTN-214ENST00000491390 UBA1P22314 1058 aaKnown RBP12.87□□□□□ -0.35
NCSTN-214ENST00000491390 ICAM3P32942 547 aa12.87□□□□□ -0.35
NCSTN-214ENST00000491390 THPOP40225 353 aa12.87□□□□□ -0.35
NCSTN-214ENST00000491390 NUCB1Q02818 461 aa12.87□□□□□ -0.35
NCSTN-214ENST00000491390 LAMC2Q13753 1193 aa12.87□□□□□ -0.35
NCSTN-214ENST00000491390 PGM5Q15124 567 aa12.87□□□□□ -0.35
NCSTN-214ENST00000491390 SEC23AQ15436 765 aa12.87□□□□□ -0.35
NCSTN-214ENST00000491390 IMMTQ16891 758 aaKnown RBP12.87□□□□□ -0.35
NCSTN-214ENST00000491390 CCDC178Q5BJE1 867 aa12.87□□□□□ -0.35
NCSTN-214ENST00000491390 CELF3Q5SZQ8 465 aaKnown RBP12.87□□□□□ -0.35
NCSTN-214ENST00000491390 MYSM1Q5VVJ2 828 aa12.87□□□□□ -0.35
NCSTN-214ENST00000491390 EMID1Q96A84 441 aaPredicted RBP12.87□□□□□ -0.35
NCSTN-214ENST00000491390 PIGSQ96S52 555 aa12.87□□□□□ -0.35
NCSTN-214ENST00000491390 C11orf84Q9BUA3 381 aaPredicted RBP12.87□□□□□ -0.35
NCSTN-214ENST00000491390 DSCC1Q9BVC3 393 aa12.87□□□□□ -0.35
NCSTN-214ENST00000491390 KATNAL1Q9BW62 490 aa12.87□□□□□ -0.35
NCSTN-214ENST00000491390 PCDHA1Q9Y5I3 950 aa12.87□□□□□ -0.35
NCSTN-214ENST00000491390 MMP1P03956 469 aa12.86□□□□□ -0.35
NCSTN-214ENST00000491390 CTSHP09668 335 aa12.86□□□□□ -0.35
NCSTN-214ENST00000491390 BMPR1AP36894 532 aa12.86□□□□□ -0.35
NCSTN-214ENST00000491390 PTPN21Q16825 1174 aa12.86□□□□□ -0.35
NCSTN-214ENST00000491390 EXOC6Q8TAG9 804 aa12.86□□□□□ -0.35
NCSTN-214ENST00000491390 CLP1Q92989 425 aaKnown RBP12.86□□□□□ -0.35
NCSTN-214ENST00000491390 C16orf70Q9BSU1 422 aa12.86□□□□□ -0.35
NCSTN-214ENST00000491390 KRT23Q9C075 422 aa12.86□□□□□ -0.35
NCSTN-214ENST00000491390 TAF6LQ9Y6J9 622 aa12.86□□□□□ -0.35
NCSTN-214ENST00000491390 ZBTB5O15062 677 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 TREHO43280 583 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 UPP2O95045 317 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 CTNNB1P35222 781 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 SP4Q02446 784 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 STOX1Q6ZVD7 989 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 SERINC5Q86VE9 423 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 VSIG10LQ86VR7 867 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 TICAM2Q86XR7 235 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 TRIM50Q86XT4 487 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 ADSSL1Q8N142 457 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 EFHBQ8N7U6 833 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 MTMR8Q96EF0 704 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 RIPOR3Q96MK2 946 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 PHF7Q9BWX1 381 aaPredicted RBP12.85□□□□□ -0.35
NCSTN-214ENST00000491390 RWDD1Q9H446 243 aaPredicted RBP12.85□□□□□ -0.35
NCSTN-214ENST00000491390 OSBPL3Q9H4L5 887 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 MLXIPQ9HAP2 919 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 RTEL1Q9NZ71 1219 aa12.85□□□□□ -0.35
NCSTN-214ENST00000491390 USP15Q9Y4E8 981 aaPredicted RBP12.85□□□□□ -0.35
NCSTN-214ENST00000491390 C17orf102A2RUQ5 167 aa12.84□□□□□ -0.35
NCSTN-214ENST00000491390 PALM3A6NDB9 673 aaPredicted RBP12.84□□□□□ -0.35
NCSTN-214ENST00000491390 RSPH10B2B2RC85 870 aa12.84□□□□□ -0.35
NCSTN-214ENST00000491390 CYTH3O43739 400 aa12.84□□□□□ -0.35
NCSTN-214ENST00000491390 PPFIA4O75335 1185 aa12.84□□□□□ -0.35
NCSTN-214ENST00000491390 GLP2RO95838 553 aa12.84□□□□□ -0.35
NCSTN-214ENST00000491390 RSPH10BP0C881 870 aa12.84□□□□□ -0.35
NCSTN-214ENST00000491390 SMIM10L2AP0DMW4 78 aa12.84□□□□□ -0.35
NCSTN-214ENST00000491390 SMIM10L2BP0DMW5 78 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms