RNA–Protein interactions for RNA: ENST00000491360.1

ABCB1-208, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 2

Gene ABCB1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-208ENST00000491360 BRF1Q92994 677 aa5.55□□□□□ -1.52
ABCB1-208ENST00000491360 GTF3C6Q969F1 213 aa5.55□□□□□ -1.52
ABCB1-208ENST00000491360 ALKBH8Q96BT7 664 aaKnown RBP5.55□□□□□ -1.52
ABCB1-208ENST00000491360 SYTL4Q96C24 671 aaPredicted RBP5.55□□□□□ -1.52
ABCB1-208ENST00000491360 ZNF396Q96N95 335 aaPredicted RBP5.55□□□□□ -1.52
ABCB1-208ENST00000491360 BPIFA3Q9BQP9 254 aa5.55□□□□□ -1.52
ABCB1-208ENST00000491360 LLPHQ9BRT6 129 aaKnown RBP5.55□□□□□ -1.52
ABCB1-208ENST00000491360 WNT10AQ9GZT5 417 aa5.55□□□□□ -1.52
ABCB1-208ENST00000491360 TRIT1Q9H3H1 467 aaKnown RBP5.55□□□□□ -1.52
ABCB1-208ENST00000491360 FBRSQ9HAH7 460 aa5.55□□□□□ -1.52
ABCB1-208ENST00000491360 SP110Q9HB58 689 aa5.55□□□□□ -1.52
ABCB1-208ENST00000491360 ZNF446Q9NWS9 450 aa5.55□□□□□ -1.52
ABCB1-208ENST00000491360 CYP8B1Q9UNU6 501 aa5.55□□□□□ -1.52
ABCB1-208ENST00000491360 YBX2Q9Y2T7 364 aaKnown RBP5.55□□□□□ -1.52
ABCB1-208ENST00000491360 PTPRUQ92729 1446 aa5.55□□□□□ -1.52
ABCB1-208ENST00000491360 DIP2BQ9P265 1576 aa5.55□□□□□ -1.52
ABCB1-208ENST00000491360 ADCY9O60503 1353 aa5.55□□□□□ -1.52
ABCB1-208ENST00000491360 METP08581 1390 aa5.55□□□□□ -1.52
ABCB1-208ENST00000491360 ACEP12821 1306 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 MRC1P22897 1456 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 DTNBO60941 627 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 ZRANB2O95218 330 aaKnown RBP eCLIP5.54□□□□□ -1.52
ABCB1-208ENST00000491360 IGHA2P01877 340 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 PDE6BP35913 854 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 HNRNPH2P55795 449 aaKnown RBP5.54□□□□□ -1.52
ABCB1-208ENST00000491360 KRTAP10-2P60368 255 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 FAM160A1Q05DH4 1040 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 GPS2Q13227 327 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 SNX17Q15036 470 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 ERCC6LQ2NKX8 1250 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 ARHGAP29Q52LW3 1261 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 MUM1L1Q5H9M0 696 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 BEND3Q5T5X7 828 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 NAA16Q6N069 864 aaPredicted RBP5.54□□□□□ -1.52
ABCB1-208ENST00000491360 TMC6Q7Z403 805 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 TXNDC2Q86VQ3 553 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 AOPEPQ8N6M6 819 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 MNS1Q8NEH6 495 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 UBXN4Q92575 508 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 PPP1R13BQ96KQ4 1090 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 KRTAP9-8Q9BYQ0 159 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 GCM1Q9NP62 436 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 ST7Q9NRC1 585 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 ORC3Q9UBD5 711 aaPredicted RBP5.54□□□□□ -1.52
ABCB1-208ENST00000491360 RCOR1Q9UKL0 485 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 USP16Q9Y5T5 823 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 FHOD1Q9Y613 1164 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 RFX7Q2KHR2 1363 aa5.54□□□□□ -1.52
ABCB1-208ENST00000491360 SPEF2Q9C093 1822 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 MYH6P13533 1939 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 CHD4Q14839 1912 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 MYH13Q9UKX3 1938 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 VGLL3A8MV65 326 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 ENC1O14682 589 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 JAK2O60674 1132 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 ALDH1L1O75891 902 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 CST3P01034 146 aaPredicted RBP5.53□□□□□ -1.52
ABCB1-208ENST00000491360 NBPF7P0C2Y1 421 aaPredicted RBP5.53□□□□□ -1.52
ABCB1-208ENST00000491360 HSP90B1P14625 803 aaKnown RBP5.53□□□□□ -1.52
ABCB1-208ENST00000491360 CAPN2P17655 700 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 SFPQP23246 707 aaKnown RBP eCLIP5.53□□□□□ -1.52
ABCB1-208ENST00000491360 TPP2P29144 1249 aaPredicted RBP5.53□□□□□ -1.52
ABCB1-208ENST00000491360 AMPHP49418 695 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 ETF1P62495 437 aaKnown RBP5.53□□□□□ -1.52
ABCB1-208ENST00000491360 STK3Q13188 491 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 INPP5AQ14642 412 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 ZRSR1Q15695 479 aaKnown RBP5.53□□□□□ -1.52
ABCB1-208ENST00000491360 NKG7Q16617 165 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 ZXDCQ2QGD7 858 aaPredicted RBP5.53□□□□□ -1.52
ABCB1-208ENST00000491360 CCDC158Q5M9N0 1113 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 E4F1Q66K89 784 aaPredicted RBP5.53□□□□□ -1.52
ABCB1-208ENST00000491360 LRFN4Q6PJG9 635 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 NXPE4Q6UWF7 544 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 SYT10Q6XYQ8 523 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 AACSQ86V21 672 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 FSIP1Q8NA03 581 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 ENGASEQ8NFI3 743 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 SMARCC2Q8TAQ2 1214 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 CHMP4CQ96CF2 233 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 FAM227BQ96M60 508 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 FSD1Q9BTV5 496 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 SGPP1Q9BX95 441 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 GOLPH3LQ9H4A5 285 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 PHAXQ9H814 394 aaKnown RBP5.53□□□□□ -1.52
ABCB1-208ENST00000491360 CWC15Q9P013 229 aaKnown RBP5.53□□□□□ -1.52
ABCB1-208ENST00000491360 FEZ2Q9UHY8 353 aaPredicted RBP5.53□□□□□ -1.52
ABCB1-208ENST00000491360 DNAI1Q9UI46 699 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 NCAPD2Q15021 1401 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 C4AP0C0L4 1744 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 C4BP0C0L5 1744 aa5.53□□□□□ -1.52
ABCB1-208ENST00000491360 PARP4Q9UKK3 1724 aaKnown RBP5.52□□□□□ -1.53
ABCB1-208ENST00000491360 A0A0D9SFI3 127 aa5.52□□□□□ -1.53
ABCB1-208ENST00000491360 A0A1W2PQ27 194 aa5.52□□□□□ -1.53
ABCB1-208ENST00000491360 A0A1W2PQ64 194 aa5.52□□□□□ -1.53
ABCB1-208ENST00000491360 A0A1W2PQD8 194 aa5.52□□□□□ -1.53
ABCB1-208ENST00000491360 OTOL1A6NHN0 477 aaPredicted RBP5.52□□□□□ -1.53
ABCB1-208ENST00000491360 EFCAB8A8MWE9 144 aa5.52□□□□□ -1.53
ABCB1-208ENST00000491360 NPHP1O15259 732 aa5.52□□□□□ -1.53
ABCB1-208ENST00000491360 CBFA2T2O43439 604 aa5.52□□□□□ -1.53
ABCB1-208ENST00000491360 PFKFB2O60825 505 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms