RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.65■□□□□ 0.1
COL6A3-211ENST00000491233 RASEFQ8IZ41 740 aa15.65■□□□□ 0.1
COL6A3-211ENST00000491233 ADAMTS19Q8TE59 1207 aa15.65■□□□□ 0.1
COL6A3-211ENST00000491233 GDPD5Q8WTR4 605 aa15.65■□□□□ 0.1
COL6A3-211ENST00000491233 RAD9AQ99638 391 aa15.65■□□□□ 0.1
COL6A3-211ENST00000491233 RBM28Q9NW13 759 aaKnown RBP15.65■□□□□ 0.1
COL6A3-211ENST00000491233 PCDHA6Q9UN73 950 aa15.65■□□□□ 0.1
COL6A3-211ENST00000491233 PCDHA8Q9Y5H6 950 aa15.65■□□□□ 0.1
COL6A3-211ENST00000491233 UBIAD1Q9Y5Z9 338 aa15.65■□□□□ 0.1
COL6A3-211ENST00000491233 ZBTB43O43298 467 aa15.64■□□□□ 0.09
COL6A3-211ENST00000491233 LPXNO60711 386 aa15.64■□□□□ 0.09
COL6A3-211ENST00000491233 AMHP03971 560 aa15.64■□□□□ 0.09
COL6A3-211ENST00000491233 NAPAP54920 295 aa15.64■□□□□ 0.09
COL6A3-211ENST00000491233 ADAM17P78536 824 aa15.64■□□□□ 0.09
COL6A3-211ENST00000491233 EXOSC10Q01780 885 aaKnown RBP15.64■□□□□ 0.09
COL6A3-211ENST00000491233 MTMR1Q13613 665 aa15.64■□□□□ 0.09
COL6A3-211ENST00000491233 ADCK5Q3MIX3 580 aa15.64■□□□□ 0.09
COL6A3-211ENST00000491233 TYW1BQ6NUM6 668 aa15.64■□□□□ 0.09
COL6A3-211ENST00000491233 DHX32Q7L7V1 743 aaKnown RBP15.64■□□□□ 0.09
COL6A3-211ENST00000491233 MYOCDQ8IZQ8 938 aa15.64■□□□□ 0.09
COL6A3-211ENST00000491233 IL27Q8NEV9 243 aa15.64■□□□□ 0.09
COL6A3-211ENST00000491233 OSBPL7Q9BZF2 842 aa15.64■□□□□ 0.09
COL6A3-211ENST00000491233 EHMT1Q9H9B1 1298 aa15.64■□□□□ 0.09
COL6A3-211ENST00000491233 MTUS1Q9ULD2 1270 aa15.64■□□□□ 0.09
COL6A3-211ENST00000491233 BRPF3Q9ULD4 1205 aa15.64■□□□□ 0.09
COL6A3-211ENST00000491233 RALGAPA2Q2PPJ7 1873 aa15.63■□□□□ 0.09
COL6A3-211ENST00000491233 TRANK1O15050 2925 aa15.63■□□□□ 0.09
COL6A3-211ENST00000491233 GSTTP1A0A1W2PQM5 241 aa15.63■□□□□ 0.09
COL6A3-211ENST00000491233 LINC01553A4QN01 128 aa15.63■□□□□ 0.09
COL6A3-211ENST00000491233 GOLGA8AA7E2F4 631 aa15.63■□□□□ 0.09
COL6A3-211ENST00000491233 GOLGA8BA8MQT2 603 aa15.63■□□□□ 0.09
COL6A3-211ENST00000491233 MARK3P27448 753 aa15.63■□□□□ 0.09
COL6A3-211ENST00000491233 TFF2Q03403 129 aa15.63■□□□□ 0.09
COL6A3-211ENST00000491233 PPFIA1Q13136 1202 aa15.63■□□□□ 0.09
COL6A3-211ENST00000491233 PPP1R18Q6NYC8 613 aa15.63■□□□□ 0.09
COL6A3-211ENST00000491233 SEPT8Q92599 483 aa15.63■□□□□ 0.09
COL6A3-211ENST00000491233 PGBD1Q96JS3 809 aa15.63■□□□□ 0.09
COL6A3-211ENST00000491233 JADE2Q9NQC1 790 aa15.63■□□□□ 0.09
COL6A3-211ENST00000491233 COL4A6Q14031 1691 aa15.63■□□□□ 0.09
COL6A3-211ENST00000491233 NRCAMQ92823 1304 aa15.63■□□□□ 0.09
COL6A3-211ENST00000491233 VCANP13611 3396 aa15.62■□□□□ 0.09
COL6A3-211ENST00000491233 KLF18A0A0U1RQI7 1052 aa15.62■□□□□ 0.09
COL6A3-211ENST00000491233 TNFRSF10AO00220 468 aa15.62■□□□□ 0.09
COL6A3-211ENST00000491233 ERVK-21P61565 698 aa15.62■□□□□ 0.09
COL6A3-211ENST00000491233 FUT2Q10981 343 aa15.62■□□□□ 0.09
COL6A3-211ENST00000491233 KRT32Q14532 448 aa15.62■□□□□ 0.09
COL6A3-211ENST00000491233 TSGA10IPQ3SY00 556 aa15.62■□□□□ 0.09
COL6A3-211ENST00000491233 SEPT1Q8WYJ6 367 aa15.62■□□□□ 0.09
COL6A3-211ENST00000491233 TGS1Q96RS0 853 aaKnown RBP15.62■□□□□ 0.09
COL6A3-211ENST00000491233 ANO3Q9BYT9 981 aa15.62■□□□□ 0.09
COL6A3-211ENST00000491233 ERAP1Q9NZ08 941 aa15.62■□□□□ 0.09
COL6A3-211ENST00000491233 LOXHD1Q8IVV2 1947 aa15.62■□□□□ 0.09
COL6A3-211ENST00000491233 SPTBN5Q9NRC6 3674 aaKnown RBP15.62■□□□□ 0.09
COL6A3-211ENST00000491233 TTC28Q96AY4 2481 aa15.61■□□□□ 0.09
COL6A3-211ENST00000491233 REV3LO60673 3130 aa15.61■□□□□ 0.09
COL6A3-211ENST00000491233 STXBP3O00186 592 aa15.61■□□□□ 0.09
COL6A3-211ENST00000491233 ADCY7P51828 1080 aa15.61■□□□□ 0.09
COL6A3-211ENST00000491233 GRIK4Q16099 956 aa15.61■□□□□ 0.09
COL6A3-211ENST00000491233 FAM26DQ5JW98 314 aa15.61■□□□□ 0.09
COL6A3-211ENST00000491233 RUFY4Q6ZNE9 571 aa15.61■□□□□ 0.09
COL6A3-211ENST00000491233 GLG1Q92896 1179 aa15.61■□□□□ 0.09
COL6A3-211ENST00000491233 UHRF1Q96T88 793 aaPredicted RBP15.61■□□□□ 0.09
COL6A3-211ENST00000491233 SUGCTQ9HAC7 445 aa15.61■□□□□ 0.09
COL6A3-211ENST00000491233 JPH1Q9HDC5 661 aaPredicted RBP15.61■□□□□ 0.09
COL6A3-211ENST00000491233 RIC8AQ9NPQ8 531 aa15.61■□□□□ 0.09
COL6A3-211ENST00000491233 NAP1L2Q9ULW6 460 aaPredicted RBP15.61■□□□□ 0.09
COL6A3-211ENST00000491233 INSL6Q9Y581 213 aa15.61■□□□□ 0.09
COL6A3-211ENST00000491233 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.6■□□□□ 0.09
COL6A3-211ENST00000491233 hCG_1984214I3L0E3 225 aa15.6■□□□□ 0.09
COL6A3-211ENST00000491233 CPA1P15085 419 aa15.6■□□□□ 0.09
COL6A3-211ENST00000491233 CDC27P30260 824 aa15.6■□□□□ 0.09
COL6A3-211ENST00000491233 KCNQ1P51787 676 aa15.6■□□□□ 0.09
COL6A3-211ENST00000491233 HTRA4P83105 476 aaPredicted RBP15.6■□□□□ 0.09
COL6A3-211ENST00000491233 AAK1Q2M2I8 961 aa15.6■□□□□ 0.09
COL6A3-211ENST00000491233 TAF2Q6P1X5 1199 aa15.6■□□□□ 0.09
COL6A3-211ENST00000491233 ZNF713Q8N859 430 aaPredicted RBP15.6■□□□□ 0.09
COL6A3-211ENST00000491233 SP7Q8TDD2 431 aaPredicted RBP15.6■□□□□ 0.09
COL6A3-211ENST00000491233 MXRA8Q9BRK3 442 aa15.6■□□□□ 0.09
COL6A3-211ENST00000491233 C17orf80Q9BSJ5 609 aa15.6■□□□□ 0.09
COL6A3-211ENST00000491233 IFIH1Q9BYX4 1025 aaKnown RBP15.6■□□□□ 0.09
COL6A3-211ENST00000491233 SMARCAD1Q9H4L7 1026 aa15.6■□□□□ 0.09
COL6A3-211ENST00000491233 KCNH7Q9NS40 1196 aa15.6■□□□□ 0.09
COL6A3-211ENST00000491233 FAM217BQ9NTX9 383 aaPredicted RBP15.6■□□□□ 0.09
COL6A3-211ENST00000491233 TMEM260Q9NX78 707 aa15.6■□□□□ 0.09
COL6A3-211ENST00000491233 TUBE1Q9UJT0 475 aa15.6■□□□□ 0.09
COL6A3-211ENST00000491233 V9GY48 417 aaPredicted RBP15.6■□□□□ 0.09
COL6A3-211ENST00000491233 ATG2AQ2TAZ0 1938 aa15.6■□□□□ 0.09
COL6A3-211ENST00000491233 MAFGO15525 162 aa15.59■□□□□ 0.09
COL6A3-211ENST00000491233 CHRNA1P02708 482 aa15.59■□□□□ 0.09
COL6A3-211ENST00000491233 HMGB1P09429 215 aaKnown RBP15.59■□□□□ 0.09
COL6A3-211ENST00000491233 GHRP10912 638 aa15.59■□□□□ 0.09
COL6A3-211ENST00000491233 RCAN1P53805 252 aa15.59■□□□□ 0.09
COL6A3-211ENST00000491233 IGBP1P78318 339 aa15.59■□□□□ 0.09
COL6A3-211ENST00000491233 FGD1P98174 961 aa15.59■□□□□ 0.09
COL6A3-211ENST00000491233 RPAINQ86UA6 219 aa15.59■□□□□ 0.09
COL6A3-211ENST00000491233 TEX2Q8IWB9 1127 aa15.59■□□□□ 0.09
COL6A3-211ENST00000491233 CYP2W1Q8TAV3 490 aa15.59■□□□□ 0.09
COL6A3-211ENST00000491233 APBB2Q92870 758 aa15.59■□□□□ 0.09
COL6A3-211ENST00000491233 NECAB3Q96P71 396 aaPredicted RBP15.59■□□□□ 0.09
COL6A3-211ENST00000491233 PCYT2Q99447 389 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms