RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 CCDC69A6NI79 296 aa19.11■□□□□ 0.65
SRGAP3-209ENST00000490889 TCF7P36402 384 aaPredicted RBP19.11■□□□□ 0.65
SRGAP3-209ENST00000490889 RUFY4Q6ZNE9 571 aa19.11■□□□□ 0.65
SRGAP3-209ENST00000490889 NLRX1Q86UT6 975 aa19.11■□□□□ 0.65
SRGAP3-209ENST00000490889 FBXO22Q8NEZ5 403 aa19.11■□□□□ 0.65
SRGAP3-209ENST00000490889 TOP1MTQ969P6 601 aa19.11■□□□□ 0.65
SRGAP3-209ENST00000490889 ESYT1Q9BSJ8 1104 aa19.11■□□□□ 0.65
SRGAP3-209ENST00000490889 ZNF215Q9UL58 517 aaPredicted RBP19.11■□□□□ 0.65
SRGAP3-209ENST00000490889 GSTTP1A0A1W2PQM5 241 aa19.1■□□□□ 0.65
SRGAP3-209ENST00000490889 UPP2O95045 317 aa19.1■□□□□ 0.65
SRGAP3-209ENST00000490889 GNAT1P11488 350 aa19.1■□□□□ 0.65
SRGAP3-209ENST00000490889 LIFRP42702 1097 aa19.1■□□□□ 0.65
SRGAP3-209ENST00000490889 GNAQP50148 359 aa19.1■□□□□ 0.65
SRGAP3-209ENST00000490889 NECTIN1Q15223 517 aa19.1■□□□□ 0.65
SRGAP3-209ENST00000490889 FAM26DQ5JW98 314 aa19.1■□□□□ 0.65
SRGAP3-209ENST00000490889 CREB3L3Q68CJ9 461 aa19.1■□□□□ 0.65
SRGAP3-209ENST00000490889 CCDC82Q8N4S0 544 aa19.1■□□□□ 0.65
SRGAP3-209ENST00000490889 GPRASP2Q96D09 838 aa19.1■□□□□ 0.65
SRGAP3-209ENST00000490889 PSTPIP2Q9H939 334 aa19.1■□□□□ 0.65
SRGAP3-209ENST00000490889 PKD2L1Q9P0L9 805 aa19.1■□□□□ 0.65
SRGAP3-209ENST00000490889 UBIAD1Q9Y5Z9 338 aa19.1■□□□□ 0.65
SRGAP3-209ENST00000490889 COL4A6Q14031 1691 aa19.1■□□□□ 0.65
SRGAP3-209ENST00000490889 NRCAMQ92823 1304 aa19.09■□□□□ 0.65
SRGAP3-209ENST00000490889 CHRNA1P02708 482 aa19.09■□□□□ 0.65
SRGAP3-209ENST00000490889 EPC2Q52LR7 807 aa19.09■□□□□ 0.65
SRGAP3-209ENST00000490889 TMTC3Q6ZXV5 915 aa19.09■□□□□ 0.65
SRGAP3-209ENST00000490889 TMTC2Q8N394 836 aa19.09■□□□□ 0.65
SRGAP3-209ENST00000490889 KHSRPQ92945 711 aaKnown RBP eCLIP19.09■□□□□ 0.65
SRGAP3-209ENST00000490889 EPHX3Q9H6B9 360 aa19.09■□□□□ 0.65
SRGAP3-209ENST00000490889 NLRC5Q86WI3 1866 aa19.08■□□□□ 0.65
SRGAP3-209ENST00000490889 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.08■□□□□ 0.64
SRGAP3-209ENST00000490889 MARK3P27448 753 aa19.08■□□□□ 0.64
SRGAP3-209ENST00000490889 MGAT3Q09327 533 aa19.08■□□□□ 0.64
SRGAP3-209ENST00000490889 SKAP1Q86WV1 359 aa19.08■□□□□ 0.64
SRGAP3-209ENST00000490889 GIMAP8Q8ND71 665 aaPredicted RBP19.08■□□□□ 0.64
SRGAP3-209ENST00000490889 YME1L1Q96TA2 773 aa19.08■□□□□ 0.64
SRGAP3-209ENST00000490889 IFIH1Q9BYX4 1025 aaKnown RBP19.08■□□□□ 0.64
SRGAP3-209ENST00000490889 UBE2ZQ9H832 354 aaPredicted RBP19.08■□□□□ 0.64
SRGAP3-209ENST00000490889 CALM1P0DP23 149 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 CALM2P0DP24 149 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 CALM3P0DP25 149 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 GHRP10912 638 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 PPFIA1Q13136 1202 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 MTMR1Q13613 665 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 MARCH8Q5T0T0 291 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 TYW1BQ6NUM6 668 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 MICU3Q86XE3 530 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 FANCBQ8NB91 859 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 SEPT1Q8WYJ6 367 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 ZBTB10Q96DT7 871 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 EHMT1Q9H9B1 1298 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 CD320Q9NPF0 282 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 PCDHA6Q9UN73 950 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 PCDHA8Q9Y5H6 950 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 SLC12A7Q9Y666 1083 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 KAT6AQ92794 2004 aa19.07■□□□□ 0.64
SRGAP3-209ENST00000490889 CNTNAP5Q8WYK1 1306 aa19.06■□□□□ 0.64
SRGAP3-209ENST00000490889 LPIN1Q14693 890 aa19.06■□□□□ 0.64
SRGAP3-209ENST00000490889 GRIK4Q16099 956 aa19.06■□□□□ 0.64
SRGAP3-209ENST00000490889 HEATR3Q7Z4Q2 680 aa19.06■□□□□ 0.64
SRGAP3-209ENST00000490889 RPAINQ86UA6 219 aa19.06■□□□□ 0.64
SRGAP3-209ENST00000490889 SGMS1Q86VZ5 419 aa19.06■□□□□ 0.64
SRGAP3-209ENST00000490889 APBB2Q92870 758 aa19.06■□□□□ 0.64
SRGAP3-209ENST00000490889 MRPL38Q96DV4 380 aaKnown RBP19.06■□□□□ 0.64
SRGAP3-209ENST00000490889 CDHR1Q96JP9 859 aa19.06■□□□□ 0.64
SRGAP3-209ENST00000490889 PCYT2Q99447 389 aa19.06■□□□□ 0.64
SRGAP3-209ENST00000490889 ANO2Q9NQ90 1003 aa19.06■□□□□ 0.64
SRGAP3-209ENST00000490889 JADE2Q9NQC1 790 aa19.06■□□□□ 0.64
SRGAP3-209ENST00000490889 RALGAPA2Q2PPJ7 1873 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 MBLAC1A4D2B0 266 aaPredicted RBP19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 SPDYE3A6NKU9 549 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 H3BNC9 293 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 LINC00271P0C7V0 271 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 KCNA5P22460 613 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 WWC2Q6AWC2 1192 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 TAF2Q6P1X5 1199 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 TMEM192Q8IY95 271 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 CYP2W1Q8TAV3 490 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 DNAJB3Q8WWF6 145 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 PGBD1Q96JS3 809 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 TCEANC2Q96MN5 208 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 SAMD11Q96NU1 681 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 C1QTNF1Q9BXJ1 281 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 ERAP1Q9NZ08 941 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 TUBE1Q9UJT0 475 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 ATG2AQ2TAZ0 1938 aa19.05■□□□□ 0.64
SRGAP3-209ENST00000490889 GPM6BQ13491 265 aa19.04■□□□□ 0.64
SRGAP3-209ENST00000490889 LEXMQ3ZCV2 418 aa19.04■□□□□ 0.64
SRGAP3-209ENST00000490889 GLG1Q92896 1179 aa19.04■□□□□ 0.64
SRGAP3-209ENST00000490889 RC3H2Q9HBD1 1191 aaKnown RBP19.04■□□□□ 0.64
SRGAP3-209ENST00000490889 IL9P15248 144 aa19.03■□□□□ 0.64
SRGAP3-209ENST00000490889 IGBP1P78318 339 aa19.03■□□□□ 0.64
SRGAP3-209ENST00000490889 FUT2Q10981 343 aa19.03■□□□□ 0.64
SRGAP3-209ENST00000490889 FBXO47Q5MNV8 452 aa19.03■□□□□ 0.64
SRGAP3-209ENST00000490889 APOA5Q6Q788 366 aa19.03■□□□□ 0.64
SRGAP3-209ENST00000490889 BANK1Q8NDB2 785 aa19.03■□□□□ 0.64
SRGAP3-209ENST00000490889 LINC01599Q8WXQ3 324 aa19.03■□□□□ 0.64
SRGAP3-209ENST00000490889 SMARCAD1Q9H4L7 1026 aa19.03■□□□□ 0.64
SRGAP3-209ENST00000490889 AGO3Q9H9G7 860 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms