RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 TFF2Q03403 129 aa22.6■■□□□ 1.21
SREBF1-216ENST00000490796 GDPD5Q8WTR4 605 aa22.6■■□□□ 1.21
SREBF1-216ENST00000490796 GLG1Q92896 1179 aa22.6■■□□□ 1.21
SREBF1-216ENST00000490796 LINC01553A4QN01 128 aa22.59■■□□□ 1.21
SREBF1-216ENST00000490796 MAFGO15525 162 aa22.59■■□□□ 1.21
SREBF1-216ENST00000490796 NAPAP54920 295 aa22.59■■□□□ 1.21
SREBF1-216ENST00000490796 ERVK-21P61565 698 aa22.59■■□□□ 1.21
SREBF1-216ENST00000490796 FGD1P98174 961 aa22.59■■□□□ 1.21
SREBF1-216ENST00000490796 COL9A3Q14050 684 aaPredicted RBP22.59■■□□□ 1.21
SREBF1-216ENST00000490796 RTN1Q16799 776 aa22.59■■□□□ 1.21
SREBF1-216ENST00000490796 SPRED2Q7Z698 418 aa22.59■■□□□ 1.21
SREBF1-216ENST00000490796 RSPH3Q86UC2 560 aa22.59■■□□□ 1.21
SREBF1-216ENST00000490796 LMBR1Q8WVP7 490 aa22.59■■□□□ 1.21
SREBF1-216ENST00000490796 LMCD1Q9NZU5 365 aa22.59■■□□□ 1.21
SREBF1-216ENST00000490796 NAP1L2Q9ULW6 460 aaPredicted RBP22.59■■□□□ 1.21
SREBF1-216ENST00000490796 TRANK1O15050 2925 aa22.59■■□□□ 1.21
SREBF1-216ENST00000490796 KAT6AQ92794 2004 aa22.58■■□□□ 1.21
SREBF1-216ENST00000490796 ZBTB43O43298 467 aa22.58■■□□□ 1.21
SREBF1-216ENST00000490796 ATP9AO75110 1047 aa22.58■■□□□ 1.21
SREBF1-216ENST00000490796 KCNA2P16389 499 aa22.58■■□□□ 1.21
SREBF1-216ENST00000490796 ITGB5P18084 799 aa22.58■■□□□ 1.21
SREBF1-216ENST00000490796 PPFIA1Q13136 1202 aa22.58■■□□□ 1.21
SREBF1-216ENST00000490796 KRT32Q14532 448 aa22.58■■□□□ 1.21
SREBF1-216ENST00000490796 APOA5Q6Q788 366 aa22.58■■□□□ 1.21
SREBF1-216ENST00000490796 DHX32Q7L7V1 743 aaKnown RBP22.58■■□□□ 1.21
SREBF1-216ENST00000490796 APBB2Q92870 758 aa22.58■■□□□ 1.21
SREBF1-216ENST00000490796 HLA-CQ95604 372 aa22.58■■□□□ 1.21
SREBF1-216ENST00000490796 YME1L1Q96TA2 773 aa22.58■■□□□ 1.21
SREBF1-216ENST00000490796 JADE2Q9NQC1 790 aa22.58■■□□□ 1.21
SREBF1-216ENST00000490796 ERAP1Q9NZ08 941 aa22.58■■□□□ 1.21
SREBF1-216ENST00000490796 TELO2Q9Y4R8 837 aa22.58■■□□□ 1.21
SREBF1-216ENST00000490796 UBIAD1Q9Y5Z9 338 aa22.58■■□□□ 1.21
SREBF1-216ENST00000490796 DOCK5Q9H7D0 1870 aa22.58■■□□□ 1.2
SREBF1-216ENST00000490796 PTPRSQ13332 1948 aa22.57■■□□□ 1.2
SREBF1-216ENST00000490796 UPP2O95045 317 aa22.57■■□□□ 1.2
SREBF1-216ENST00000490796 MARK3P27448 753 aa22.57■■□□□ 1.2
SREBF1-216ENST00000490796 TAF2Q6P1X5 1199 aa22.57■■□□□ 1.2
SREBF1-216ENST00000490796 SMARCAD1Q9H4L7 1026 aa22.57■■□□□ 1.2
SREBF1-216ENST00000490796 CDC45O75419 566 aa22.56■■□□□ 1.2
SREBF1-216ENST00000490796 PPP1R18Q6NYC8 613 aa22.56■■□□□ 1.2
SREBF1-216ENST00000490796 FBXO22Q8NEZ5 403 aa22.56■■□□□ 1.2
SREBF1-216ENST00000490796 TNPO1Q92973 898 aaKnown RBP22.56■■□□□ 1.2
SREBF1-216ENST00000490796 TCEANC2Q96MN5 208 aa22.56■■□□□ 1.2
SREBF1-216ENST00000490796 SDF4Q9BRK5 362 aa22.56■■□□□ 1.2
SREBF1-216ENST00000490796 IFIH1Q9BYX4 1025 aaKnown RBP22.56■■□□□ 1.2
SREBF1-216ENST00000490796 AZI2Q9H6S1 392 aa22.56■■□□□ 1.2
SREBF1-216ENST00000490796 SUGCTQ9HAC7 445 aa22.56■■□□□ 1.2
SREBF1-216ENST00000490796 GSTTP1A0A1W2PQM5 241 aa22.55■■□□□ 1.2
SREBF1-216ENST00000490796 GOLGA8AA7E2F4 631 aa22.55■■□□□ 1.2
SREBF1-216ENST00000490796 GOLGA8BA8MQT2 603 aa22.55■■□□□ 1.2
SREBF1-216ENST00000490796 LPXNO60711 386 aa22.55■■□□□ 1.2
SREBF1-216ENST00000490796 FOSP01100 380 aaPredicted RBP22.55■■□□□ 1.2
SREBF1-216ENST00000490796 HMGB1P09429 215 aaKnown RBP22.55■■□□□ 1.2
SREBF1-216ENST00000490796 KCNQ1P51787 676 aa22.55■■□□□ 1.2
SREBF1-216ENST00000490796 ADCY7P51828 1080 aa22.55■■□□□ 1.2
SREBF1-216ENST00000490796 GRIK4Q16099 956 aa22.55■■□□□ 1.2
SREBF1-216ENST00000490796 WWC2Q6AWC2 1192 aa22.55■■□□□ 1.2
SREBF1-216ENST00000490796 SKAP1Q86WV1 359 aa22.55■■□□□ 1.2
SREBF1-216ENST00000490796 GLT8D2Q9H1C3 349 aa22.55■■□□□ 1.2
SREBF1-216ENST00000490796 JPH1Q9HDC5 661 aaPredicted RBP22.55■■□□□ 1.2
SREBF1-216ENST00000490796 TUBE1Q9UJT0 475 aa22.55■■□□□ 1.2
SREBF1-216ENST00000490796 V9GY48 417 aaPredicted RBP22.55■■□□□ 1.2
SREBF1-216ENST00000490796 CNTNAP5Q8WYK1 1306 aa22.55■■□□□ 1.2
SREBF1-216ENST00000490796 KLF18A0A0U1RQI7 1052 aa22.54■■□□□ 1.2
SREBF1-216ENST00000490796 hCG_1984214I3L0E3 225 aa22.54■■□□□ 1.2
SREBF1-216ENST00000490796 BMP1P13497 986 aa22.54■■□□□ 1.2
SREBF1-216ENST00000490796 ADAM17P78536 824 aa22.54■■□□□ 1.2
SREBF1-216ENST00000490796 FAM26DQ5JW98 314 aa22.54■■□□□ 1.2
SREBF1-216ENST00000490796 TEX2Q8IWB9 1127 aa22.54■■□□□ 1.2
SREBF1-216ENST00000490796 ZNF713Q8N859 430 aaPredicted RBP22.54■■□□□ 1.2
SREBF1-216ENST00000490796 SAMD11Q96NU1 681 aa22.54■■□□□ 1.2
SREBF1-216ENST00000490796 MXRA8Q9BRK3 442 aa22.54■■□□□ 1.2
SREBF1-216ENST00000490796 RIC8AQ9NPQ8 531 aa22.54■■□□□ 1.2
SREBF1-216ENST00000490796 SLC9A2Q9UBY0 812 aa22.54■■□□□ 1.2
SREBF1-216ENST00000490796 BDP1A6H8Y1 2624 aa22.54■■□□□ 1.2
SREBF1-216ENST00000490796 MICAL3Q7RTP6 2002 aa22.53■■□□□ 1.2
SREBF1-216ENST00000490796 ZNF76P36508 570 aa22.53■■□□□ 1.2
SREBF1-216ENST00000490796 IGBP1P78318 339 aa22.53■■□□□ 1.2
SREBF1-216ENST00000490796 HTRA4P83105 476 aaPredicted RBP22.53■■□□□ 1.2
SREBF1-216ENST00000490796 EXOSC10Q01780 885 aaKnown RBP22.53■■□□□ 1.2
SREBF1-216ENST00000490796 TOP1MTQ969P6 601 aa22.53■■□□□ 1.2
SREBF1-216ENST00000490796 C17orf80Q9BSJ5 609 aa22.53■■□□□ 1.2
SREBF1-216ENST00000490796 KCNH7Q9NS40 1196 aa22.53■■□□□ 1.2
SREBF1-216ENST00000490796 BRPF3Q9ULD4 1205 aa22.53■■□□□ 1.2
SREBF1-216ENST00000490796 TRPC6Q9Y210 931 aa22.53■■□□□ 1.2
SREBF1-216ENST00000490796 TCF20Q9UGU0 1960 aaKnown RBP22.52■■□□□ 1.2
SREBF1-216ENST00000490796 SMCO2A6NFE2 343 aa22.52■■□□□ 1.2
SREBF1-216ENST00000490796 RRN3P2A6NIE6 340 aa22.52■■□□□ 1.2
SREBF1-216ENST00000490796 RBAK-RBAKDNI3L0D1 243 aa22.52■■□□□ 1.2
SREBF1-216ENST00000490796 RPLP2P05387 115 aaKnown RBP22.52■■□□□ 1.2
SREBF1-216ENST00000490796 GHRP10912 638 aa22.52■■□□□ 1.2
SREBF1-216ENST00000490796 MKRN4PQ13434 485 aaPredicted RBP22.52■■□□□ 1.2
SREBF1-216ENST00000490796 PTPROQ16827 1216 aa22.52■■□□□ 1.2
SREBF1-216ENST00000490796 TSGA10IPQ3SY00 556 aa22.52■■□□□ 1.2
SREBF1-216ENST00000490796 RUFY4Q6ZNE9 571 aa22.52■■□□□ 1.2
SREBF1-216ENST00000490796 RPAINQ86UA6 219 aa22.52■■□□□ 1.2
SREBF1-216ENST00000490796 RASEFQ8IZ41 740 aa22.52■■□□□ 1.2
SREBF1-216ENST00000490796 PGBD1Q96JS3 809 aa22.52■■□□□ 1.2
SREBF1-216ENST00000490796 NECAB3Q96P71 396 aaPredicted RBP22.52■■□□□ 1.2
SREBF1-216ENST00000490796 ANO3Q9BYT9 981 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms