RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 RNPEPQ9H4A4 650 aa11.87□□□□□ -0.51
TTC28-207ENST00000490475 RTEL1Q9NZ71 1219 aa11.87□□□□□ -0.51
TTC28-207ENST00000490475 FOSP01100 380 aaPredicted RBP11.86□□□□□ -0.51
TTC28-207ENST00000490475 RPS6KB1P23443 525 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 RCAN1P53805 252 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 FGD1P98174 961 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 PPP1R18Q6NYC8 613 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 TRAF7Q6Q0C0 670 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 USP17L6PQ6QN14 398 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 CCDC82Q8N4S0 544 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 SRBD1Q8N5C6 995 aaKnown RBP11.86□□□□□ -0.51
TTC28-207ENST00000490475 DBF4BQ8NFT6 615 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 SEPT1Q8WYJ6 367 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 HLA-CQ95604 372 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 SMARCAD1Q9H4L7 1026 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 ZSWIM6Q9HCJ5 1215 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 ERAP1Q9NZ08 941 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 BDP1A6H8Y1 2624 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 PTPRSQ13332 1948 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 SIP14410 1827 aa11.86□□□□□ -0.51
TTC28-207ENST00000490475 KLF18A0A0U1RQI7 1052 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 TREHO43280 583 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 SORBS3O60504 671 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 PLEKHA8P1O95397 391 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 DEFB103AP81534 67 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 ZNF200P98182 395 aaPredicted RBP11.85□□□□□ -0.51
TTC28-207ENST00000490475 APOBRQ0VD83 1088 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 SEMA3FQ13275 785 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 GRB10Q13322 594 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 MTMR1Q13613 665 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 PTPROQ16827 1216 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 FAM26DQ5JW98 314 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 MCTP2Q6DN12 878 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 APOA5Q6Q788 366 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 TMTC3Q6ZXV5 915 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 RUFY3Q7L099 469 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 MICU3Q86XE3 530 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 MYOCDQ8IZQ8 938 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 GPKOWQ92917 476 aaPredicted RBP eCLIP11.85□□□□□ -0.51
TTC28-207ENST00000490475 BRF1Q92994 677 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 UPF3BQ9BZI7 483 aaKnown RBP11.85□□□□□ -0.51
TTC28-207ENST00000490475 CERS4Q9HA82 394 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 NAP1L2Q9ULW6 460 aaPredicted RBP11.85□□□□□ -0.51
TTC28-207ENST00000490475 RWDD3Q9Y3V2 267 aa11.85□□□□□ -0.51
TTC28-207ENST00000490475 CCDC196A0A1B0GTZ2 297 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 LINC01553A4QN01 128 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 RRN3P2A6NIE6 340 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 ZBTB43O43298 467 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 BMP1P13497 986 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 TCF7P36402 384 aaPredicted RBP11.84□□□□□ -0.51
TTC28-207ENST00000490475 ADAM17P78536 824 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 HTRA4P83105 476 aaPredicted RBP11.84□□□□□ -0.51
TTC28-207ENST00000490475 ARHGAP4P98171 946 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 MBTPS1Q14703 1052 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 C8orf34Q49A92 452 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 UTP14CQ5TAP6 766 aaKnown RBP11.84□□□□□ -0.51
TTC28-207ENST00000490475 GLG1Q92896 1179 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 WNT8BQ93098 351 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 TOP1MTQ969P6 601 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 YME1L1Q96TA2 773 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 LARP6Q9BRS8 491 aaKnown RBP11.84□□□□□ -0.51
TTC28-207ENST00000490475 IFIH1Q9BYX4 1025 aaKnown RBP11.84□□□□□ -0.51
TTC28-207ENST00000490475 TM6SF1Q9BZW5 370 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 AZI2Q9H6S1 392 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 SETD4Q9NVD3 440 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 UBIAD1Q9Y5Z9 338 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 CYP46A1Q9Y6A2 500 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 DOCK5Q9H7D0 1870 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 COL4A6Q14031 1691 aa11.84□□□□□ -0.51
TTC28-207ENST00000490475 BRWD1Q9NSI6 2320 aa11.83□□□□□ -0.51
TTC28-207ENST00000490475 hCG_1642624A0A1W2PR95 340 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 EPOPA6NHQ4 379 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 RFXAPO00287 272 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 KCNA2P16389 499 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 SLC26A2P50443 739 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 PPFIA1Q13136 1202 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 AP3B2Q13367 1082 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 MKRN4PQ13434 485 aaPredicted RBP11.83□□□□□ -0.52
TTC28-207ENST00000490475 HEATR3Q7Z4Q2 680 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 FBXL16Q8N461 479 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 FBXO22Q8NEZ5 403 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 SP7Q8TDD2 431 aaPredicted RBP11.83□□□□□ -0.52
TTC28-207ENST00000490475 LMBR1Q8WVP7 490 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 ZFP91Q96JP5 570 aaPredicted RBP11.83□□□□□ -0.52
TTC28-207ENST00000490475 SDF4Q9BRK5 362 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 C1QTNF1Q9BXJ1 281 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 SUGCTQ9HAC7 445 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 JPH1Q9HDC5 661 aaPredicted RBP11.83□□□□□ -0.52
TTC28-207ENST00000490475 JADE2Q9NQC1 790 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 FAM217BQ9NTX9 383 aaPredicted RBP11.83□□□□□ -0.52
TTC28-207ENST00000490475 RNF216Q9NWF9 866 aaPredicted RBP11.83□□□□□ -0.52
TTC28-207ENST00000490475 PCDHA6Q9UN73 950 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 PCDHA8Q9Y5H6 950 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 SQORQ9Y6N5 450 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 NFASCO94856 1347 aa11.83□□□□□ -0.52
TTC28-207ENST00000490475 SPTBN5Q9NRC6 3674 aaKnown RBP11.82□□□□□ -0.52
TTC28-207ENST00000490475 LCHNA4D1U4 455 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 MBLAC1A4D2B0 266 aaPredicted RBP11.82□□□□□ -0.52
TTC28-207ENST00000490475 M0QZ92 97 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 NCK2O43639 380 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms