RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 NBEAQ8NFP9 2946 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 TCRBV5S4A2TA0A5A2 114 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 PRKAB2O43741 272 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 KPNA6O60684 536 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 AMHP03971 560 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 TIMP2P16035 220 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 PDE6AP16499 860 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 ALDH1L2Q3SY69 923 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 DBF4BQ8NFT6 615 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 KCNV2Q8TDN2 545 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 KAT2BQ92831 832 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 TOP1MTQ969P6 601 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 YME1L1Q96TA2 773 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 NYAP2Q9P242 653 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 FEM1BQ9UK73 627 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 BPTFQ12830 3046 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 IGF2RP11717 2491 aa8.53□□□□□ -1.04
PDLIM1-203ENST00000490391 IGKV6D-41A0A0C4DH26 115 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 MAN1A2O60476 641 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 GLP2RO95838 553 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 RB1P06400 928 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 GNAI3P08754 354 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 NDUFV1P49821 464 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 NNTQ13423 1086 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 COL9A2Q14055 689 aaPredicted RBP8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 ST3GAL2Q16842 350 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 BRDTQ58F21 947 aaPredicted RBP8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 MUM1L1Q5H9M0 696 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 ZNF618Q5T7W0 954 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 SUSD6Q92537 303 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 COPS5Q92905 334 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 RPGRIP1Q96KN7 1286 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 TRERF1Q96PN7 1200 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 IGFLR1Q9H665 355 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 RC3H2Q9HBD1 1191 aaKnown RBP8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 GTF2IRD1Q9UHL9 959 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 CTDP1Q9Y5B0 961 aaPredicted RBP8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 PCDHGC5Q9Y5F6 944 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 ZBED9Q6R2W3 1325 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 ZNF532Q9HCE3 1301 aa8.52□□□□□ -1.05
PDLIM1-203ENST00000490391 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 NKRFO15226 690 aaKnown RBP eCLIP8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 MMP1P03956 469 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 FDX1P10109 184 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 ARP10275 920 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 ATF7P17544 494 aaPredicted RBP8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 CTNNB1P35222 781 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 BMPR1AP36894 532 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 TKFCQ3LXA3 575 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 PLEKHG4Q58EX7 1191 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 SLC9C2Q5TAH2 1124 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 ADGRD2Q7Z7M1 963 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 KIAA2013Q8IYS2 634 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 LRRC47Q8N1G4 583 aaKnown RBP8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 EFHBQ8N7U6 833 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 COL26A1Q96A83 441 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 EAF2Q96CJ1 260 aaPredicted RBP8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 C11orf84Q9BUA3 381 aaPredicted RBP8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 CCDC8Q9H0W5 538 aaPredicted RBP8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 ARMT1Q9H993 441 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 ATP8A2Q9NTI2 1148 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 SMC4Q9NTJ3 1288 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 RALYQ9UKM9 306 aaKnown RBP8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 BARX2Q9UMQ3 279 aaPredicted RBP8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 RAD50Q92878 1312 aa8.51□□□□□ -1.05
PDLIM1-203ENST00000490391 HELZ2Q9BYK8 2649 aaKnown RBP8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 LOC102724159A0A0B4J2E5 919 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 ARIH2O95376 493 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 ADH1CP00326 375 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 ALAS1P13196 640 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 RASA1P20936 1047 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 DNAJB1P25685 340 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 ALDH5A1P51649 535 aaPredicted RBP8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 WDR4P57081 412 aaKnown RBP8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 PTK7Q13308 1070 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 PPP2R5BQ15173 497 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 PWP2Q15269 919 aaKnown RBP8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 KANK3Q6NY19 840 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 RPAP2Q8IXW5 612 aaPredicted RBP8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 GPR161Q8N6U8 529 aaKnown RBP8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 GMCL1P1Q8NEA9 526 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 CLP1Q92989 425 aaKnown RBP8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 MKL1Q969V6 931 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 OSBPL7Q9BZF2 842 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 HDAC6Q9UBN7 1215 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 NOB1Q9ULX3 412 aaKnown RBP8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 EMSYQ7Z589 1322 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 ITPR1Q14643 2758 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 UNC79Q9P2D8 2635 aa8.5□□□□□ -1.05
PDLIM1-203ENST00000490391 FANCMQ8IYD8 2048 aa8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 TMEM232C9JQI7 657 aa8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 E9PSI1 815 aa8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 UPP2O95045 317 aa8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 CSPG5O95196 566 aa8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 BRD1O95696 1058 aa8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 MMP3P08254 477 aa8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 CD46P15529 392 aa8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 EDNRBP24530 442 aa8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 CHMP4BP1P59074 171 aa8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 SLFNL1Q499Z3 407 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms