RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 ZNF76P36508 570 aa22.53■■□□□ 1.2
SMC4-222ENST00000490207 PBX2P40425 430 aa22.53■■□□□ 1.2
SMC4-222ENST00000490207 STK3Q13188 491 aa22.53■■□□□ 1.2
SMC4-222ENST00000490207 RAB30Q15771 203 aa22.53■■□□□ 1.2
SMC4-222ENST00000490207 SERINC5Q86VE9 423 aa22.53■■□□□ 1.2
SMC4-222ENST00000490207 SEPT1Q8WYJ6 367 aa22.53■■□□□ 1.2
SMC4-222ENST00000490207 ATP6V0A1Q93050 837 aa22.53■■□□□ 1.2
SMC4-222ENST00000490207 SDF4Q9BRK5 362 aa22.53■■□□□ 1.2
SMC4-222ENST00000490207 VPS54Q9P1Q0 977 aa22.53■■□□□ 1.2
SMC4-222ENST00000490207 NFASCO94856 1347 aa22.53■■□□□ 1.2
SMC4-222ENST00000490207 GSTTP1A0A1W2PQM5 241 aa22.52■■□□□ 1.2
SMC4-222ENST00000490207 ADAMTS3O15072 1205 aa22.52■■□□□ 1.2
SMC4-222ENST00000490207 EIF5BO60841 1220 aaKnown RBP22.52■■□□□ 1.2
SMC4-222ENST00000490207 ARP10275 920 aa22.52■■□□□ 1.2
SMC4-222ENST00000490207 SSRP1Q08945 709 aaKnown RBP22.52■■□□□ 1.2
SMC4-222ENST00000490207 BICD2Q8TD16 824 aa22.52■■□□□ 1.2
SMC4-222ENST00000490207 RNPEPQ9H4A4 650 aa22.52■■□□□ 1.2
SMC4-222ENST00000490207 AGO4Q9HCK5 861 aaKnown RBP22.52■■□□□ 1.2
SMC4-222ENST00000490207 SLC9A2Q9UBY0 812 aa22.52■■□□□ 1.2
SMC4-222ENST00000490207 TREHO43280 583 aa22.51■■□□□ 1.19
SMC4-222ENST00000490207 GNAT1P11488 350 aa22.51■■□□□ 1.19
SMC4-222ENST00000490207 ZNF618Q5T7W0 954 aa22.51■■□□□ 1.19
SMC4-222ENST00000490207 CPLX2Q6PUV4 134 aaKnown RBP22.51■■□□□ 1.19
SMC4-222ENST00000490207 NIPA1Q7RTP0 329 aa22.51■■□□□ 1.19
SMC4-222ENST00000490207 RASGRP4Q8TDF6 673 aa22.51■■□□□ 1.19
SMC4-222ENST00000490207 CRYGNQ8WXF5 182 aa22.51■■□□□ 1.19
SMC4-222ENST00000490207 CDX2Q99626 313 aaPredicted RBP22.51■■□□□ 1.19
SMC4-222ENST00000490207 SH3GLB2Q9NR46 395 aa22.51■■□□□ 1.19
SMC4-222ENST00000490207 MSRAQ9UJ68 235 aa22.51■■□□□ 1.19
SMC4-222ENST00000490207 EMSYQ7Z589 1322 aa22.51■■□□□ 1.19
SMC4-222ENST00000490207 COL6A3P12111 3177 aa22.5■■□□□ 1.19
SMC4-222ENST00000490207 MEIS1O00470 390 aa22.5■■□□□ 1.19
SMC4-222ENST00000490207 DEXIO95424 95 aa22.5■■□□□ 1.19
SMC4-222ENST00000490207 CYP3A4P08684 503 aa22.5■■□□□ 1.19
SMC4-222ENST00000490207 ATP2A2P16615 1042 aaKnown RBP22.5■■□□□ 1.19
SMC4-222ENST00000490207 ITGB3BPQ13352 177 aaPredicted RBP22.5■■□□□ 1.19
SMC4-222ENST00000490207 TRAF7Q6Q0C0 670 aa22.5■■□□□ 1.19
SMC4-222ENST00000490207 LMBR1Q8WVP7 490 aa22.5■■□□□ 1.19
SMC4-222ENST00000490207 GLG1Q92896 1179 aa22.5■■□□□ 1.19
SMC4-222ENST00000490207 SETD4Q9NVD3 440 aa22.5■■□□□ 1.19
SMC4-222ENST00000490207 ERAP1Q9NZ08 941 aa22.5■■□□□ 1.19
SMC4-222ENST00000490207 FAM86B1E9PN63 330 aa22.49■■□□□ 1.19
SMC4-222ENST00000490207 NBNO60934 754 aa22.49■■□□□ 1.19
SMC4-222ENST00000490207 BAIAP3O94812 1187 aa22.49■■□□□ 1.19
SMC4-222ENST00000490207 CXCL10P02778 98 aa22.49■■□□□ 1.19
SMC4-222ENST00000490207 FAM86B2P0C5J1 330 aa22.49■■□□□ 1.19
SMC4-222ENST00000490207 MARK3P27448 753 aa22.49■■□□□ 1.19
SMC4-222ENST00000490207 THPOP40225 353 aa22.49■■□□□ 1.19
SMC4-222ENST00000490207 GPNMBQ14956 572 aa22.49■■□□□ 1.19
SMC4-222ENST00000490207 CNKSR3Q6P9H4 555 aa22.49■■□□□ 1.19
SMC4-222ENST00000490207 PLA2G4DQ86XP0 818 aa22.49■■□□□ 1.19
SMC4-222ENST00000490207 SLC9A7Q96T83 725 aa22.49■■□□□ 1.19
SMC4-222ENST00000490207 SMARCAD1Q9H4L7 1026 aa22.49■■□□□ 1.19
SMC4-222ENST00000490207 ZNF576Q9H609 170 aa22.49■■□□□ 1.19
SMC4-222ENST00000490207 NRCAMQ92823 1304 aa22.49■■□□□ 1.19
SMC4-222ENST00000490207 SIP14410 1827 aa22.48■■□□□ 1.19
SMC4-222ENST00000490207 IGLV3-22A0A075B6J6 115 aa22.48■■□□□ 1.19
SMC4-222ENST00000490207 LGR5O75473 907 aa22.48■■□□□ 1.19
SMC4-222ENST00000490207 NLRP5P59047 1200 aa22.48■■□□□ 1.19
SMC4-222ENST00000490207 ACTR2P61160 394 aa22.48■■□□□ 1.19
SMC4-222ENST00000490207 SETQ01105 290 aaPredicted RBP22.48■■□□□ 1.19
SMC4-222ENST00000490207 PPFIA1Q13136 1202 aa22.48■■□□□ 1.19
SMC4-222ENST00000490207 MYLIPQ8WY64 445 aa22.48■■□□□ 1.19
SMC4-222ENST00000490207 SLKQ9H2G2 1235 aaPredicted RBP22.48■■□□□ 1.19
SMC4-222ENST00000490207 NKX2-4Q9H2Z4 354 aa22.48■■□□□ 1.19
SMC4-222ENST00000490207 YBX2Q9Y2T7 364 aaKnown RBP22.48■■□□□ 1.19
SMC4-222ENST00000490207 CDH23Q9H251 3354 aa22.47■■□□□ 1.19
SMC4-222ENST00000490207 MICAL3Q7RTP6 2002 aa22.47■■□□□ 1.19
SMC4-222ENST00000490207 DDX39AO00148 427 aaKnown RBP22.47■■□□□ 1.19
SMC4-222ENST00000490207 CAND2O75155 1236 aa22.47■■□□□ 1.19
SMC4-222ENST00000490207 CDKL5O76039 1030 aa22.47■■□□□ 1.19
SMC4-222ENST00000490207 KCNJ6P48051 423 aa22.47■■□□□ 1.19
SMC4-222ENST00000490207 RABGGTBP53611 331 aa22.47■■□□□ 1.19
SMC4-222ENST00000490207 SCRN1Q12765 414 aa22.47■■□□□ 1.19
SMC4-222ENST00000490207 MBTPS1Q14703 1052 aa22.47■■□□□ 1.19
SMC4-222ENST00000490207 IL17RAQ96F46 866 aa22.47■■□□□ 1.19
SMC4-222ENST00000490207 PCYT2Q99447 389 aa22.47■■□□□ 1.19
SMC4-222ENST00000490207 AZI2Q9H6S1 392 aa22.47■■□□□ 1.19
SMC4-222ENST00000490207 RSPH10B2B2RC85 870 aa22.46■■□□□ 1.19
SMC4-222ENST00000490207 CTSHP09668 335 aa22.46■■□□□ 1.19
SMC4-222ENST00000490207 RSPH10BP0C881 870 aa22.46■■□□□ 1.19
SMC4-222ENST00000490207 AK2P54819 239 aa22.46■■□□□ 1.19
SMC4-222ENST00000490207 ADAM17P78536 824 aa22.46■■□□□ 1.19
SMC4-222ENST00000490207 GRIN2CQ14957 1233 aa22.46■■□□□ 1.19
SMC4-222ENST00000490207 ANKRD1Q15327 319 aa22.46■■□□□ 1.19
SMC4-222ENST00000490207 GRIK4Q16099 956 aa22.46■■□□□ 1.19
SMC4-222ENST00000490207 TPCN1Q9ULQ1 816 aa22.46■■□□□ 1.19
SMC4-222ENST00000490207 PCDHA4Q9UN74 947 aa22.46■■□□□ 1.19
SMC4-222ENST00000490207 PCDHA11Q9Y5I1 949 aa22.46■■□□□ 1.19
SMC4-222ENST00000490207 PFKFB2O60825 505 aa22.45■■□□□ 1.18
SMC4-222ENST00000490207 FOSL2P15408 326 aa22.45■■□□□ 1.18
SMC4-222ENST00000490207 WDR5P61964 334 aaKnown RBP22.45■■□□□ 1.18
SMC4-222ENST00000490207 PHOSPHO2Q8TCD6 241 aa22.45■■□□□ 1.18
SMC4-222ENST00000490207 AIFM3Q96NN9 605 aa22.45■■□□□ 1.18
SMC4-222ENST00000490207 IPO5O00410 1097 aaKnown RBP22.44■■□□□ 1.18
SMC4-222ENST00000490207 TCTN1Q2MV58 587 aa22.44■■□□□ 1.18
SMC4-222ENST00000490207 PRR16Q569H4 304 aa22.44■■□□□ 1.18
SMC4-222ENST00000490207 FAM177A1Q8N128 213 aaPredicted RBP22.44■■□□□ 1.18
SMC4-222ENST00000490207 ZNF577Q9BSK1 485 aa22.44■■□□□ 1.18
SMC4-222ENST00000490207 SLC28A3Q9HAS3 691 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms