RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 SETD4Q9NVD3 440 aa13.56□□□□□ -0.24
FDPS-215ENST00000490140 PRKAG3Q9UGI9 489 aa13.56□□□□□ -0.24
FDPS-215ENST00000490140 MUC6Q6W4X9 2439 aa13.55□□□□□ -0.24
FDPS-215ENST00000490140 PRR33A8MZF0 331 aa13.55□□□□□ -0.24
FDPS-215ENST00000490140 E7EWF7 191 aa13.55□□□□□ -0.24
FDPS-215ENST00000490140 RB1P06400 928 aa13.55□□□□□ -0.24
FDPS-215ENST00000490140 CYP21A2P08686 494 aa13.55□□□□□ -0.24
FDPS-215ENST00000490140 CALM1P0DP23 149 aa13.55□□□□□ -0.24
FDPS-215ENST00000490140 CALM2P0DP24 149 aa13.55□□□□□ -0.24
FDPS-215ENST00000490140 CALM3P0DP25 149 aa13.55□□□□□ -0.24
FDPS-215ENST00000490140 CTNNB1P35222 781 aa13.55□□□□□ -0.24
FDPS-215ENST00000490140 MRPS9P82933 396 aaKnown RBP13.55□□□□□ -0.24
FDPS-215ENST00000490140 HIC1Q14526 733 aa13.55□□□□□ -0.24
FDPS-215ENST00000490140 FAM26DQ5JW98 314 aa13.55□□□□□ -0.24
FDPS-215ENST00000490140 UTP14CQ5TAP6 766 aaKnown RBP13.55□□□□□ -0.24
FDPS-215ENST00000490140 TMTC2Q8N394 836 aa13.55□□□□□ -0.24
FDPS-215ENST00000490140 LMBR1Q8WVP7 490 aa13.55□□□□□ -0.24
FDPS-215ENST00000490140 GPKOWQ92917 476 aaPredicted RBP eCLIP13.55□□□□□ -0.24
FDPS-215ENST00000490140 PABPC5Q96DU9 382 aaKnown RBP13.55□□□□□ -0.24
FDPS-215ENST00000490140 POP1Q99575 1024 aaKnown RBP13.55□□□□□ -0.24
FDPS-215ENST00000490140 ERAP1Q9NZ08 941 aa13.55□□□□□ -0.24
FDPS-215ENST00000490140 GRXCR2A6NFK2 248 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 SPDYE3A6NKU9 549 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 M0QZ92 97 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 MAFGO15525 162 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 CYTH3O43739 400 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 TCF7P36402 384 aaPredicted RBP13.54□□□□□ -0.24
FDPS-215ENST00000490140 SP4Q02446 784 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 PPFIA1Q13136 1202 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 NFXL1Q6ZNB6 911 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 FAM43BQ6ZT52 329 aaPredicted RBP13.54□□□□□ -0.24
FDPS-215ENST00000490140 EP400NLQ6ZTU2 488 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 TRIM50Q86XT4 487 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 TEX2Q8IWB9 1127 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 ZNF654Q8IZM8 581 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 NEK9Q8TD19 979 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 UPF3BQ9BZI7 483 aaKnown RBP13.54□□□□□ -0.24
FDPS-215ENST00000490140 RTEL1Q9NZ71 1219 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 TUBE1Q9UJT0 475 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 ADGRA3Q8IWK6 1321 aa13.54□□□□□ -0.24
FDPS-215ENST00000490140 CCDC69A6NI79 296 aa13.53□□□□□ -0.24
FDPS-215ENST00000490140 C5orf67F2Z3F1 127 aa13.53□□□□□ -0.24
FDPS-215ENST00000490140 HOXD11P31277 338 aaPredicted RBP13.53□□□□□ -0.24
FDPS-215ENST00000490140 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.53□□□□□ -0.24
FDPS-215ENST00000490140 PIBF1Q8WXW3 757 aa13.53□□□□□ -0.24
FDPS-215ENST00000490140 GLG1Q92896 1179 aa13.53□□□□□ -0.24
FDPS-215ENST00000490140 ZFP91Q96JP5 570 aaPredicted RBP13.53□□□□□ -0.24
FDPS-215ENST00000490140 PLVAPQ9BX97 442 aa13.53□□□□□ -0.24
FDPS-215ENST00000490140 FTHL17Q9BXU8 183 aa13.53□□□□□ -0.24
FDPS-215ENST00000490140 DOCK5Q9H7D0 1870 aa13.53□□□□□ -0.24
FDPS-215ENST00000490140 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.52□□□□□ -0.25
FDPS-215ENST00000490140 RRN3P2A6NIE6 340 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 DCXO43602 365 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 GHRP10912 638 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 GSPT1P15170 499 aaKnown RBP13.52□□□□□ -0.25
FDPS-215ENST00000490140 CHMLP26374 656 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 MCM5P33992 734 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 ADAM17P78536 824 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 SEMA3FQ13275 785 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 MTMR1Q13613 665 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 SLC35G1Q2M3R5 365 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 TCEAL5Q5H9L2 206 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 USP17L6PQ6QN14 398 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 TSHZ1Q6ZSZ6 1077 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 EXOC6Q8TAG9 804 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 SEPT1Q8WYJ6 367 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 TMEM87BQ96K49 555 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 IL25Q9H293 177 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 SMARCAD1Q9H4L7 1026 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 AZI2Q9H6S1 392 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 PSTPIP2Q9H939 334 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 RNF216Q9NWF9 866 aaPredicted RBP13.52□□□□□ -0.25
FDPS-215ENST00000490140 CLDND1Q9NY35 253 aa13.52□□□□□ -0.25
FDPS-215ENST00000490140 FAM86C2PA6NEL3 165 aa13.51□□□□□ -0.25
FDPS-215ENST00000490140 H3BQ06 376 aaPredicted RBP13.51□□□□□ -0.25
FDPS-215ENST00000490140 MEIS2O14770 477 aa13.51□□□□□ -0.25
FDPS-215ENST00000490140 SGSM2O43147 1006 aa13.51□□□□□ -0.25
FDPS-215ENST00000490140 IL9P15248 144 aa13.51□□□□□ -0.25
FDPS-215ENST00000490140 BMPR1AP36894 532 aa13.51□□□□□ -0.25
FDPS-215ENST00000490140 BTG3Q14201 252 aaPredicted RBP13.51□□□□□ -0.25
FDPS-215ENST00000490140 COL19A1Q14993 1142 aa13.51□□□□□ -0.25
FDPS-215ENST00000490140 GRIK4Q16099 956 aa13.51□□□□□ -0.25
FDPS-215ENST00000490140 IER5Q5VY09 327 aa13.51□□□□□ -0.25
FDPS-215ENST00000490140 MB21D2Q8IYB1 491 aaPredicted RBP13.51□□□□□ -0.25
FDPS-215ENST00000490140 IGDCC4Q8TDY8 1250 aa13.51□□□□□ -0.25
FDPS-215ENST00000490140 KCNH6Q9H252 994 aa13.51□□□□□ -0.25
FDPS-215ENST00000490140 LY9Q9HBG7 655 aa13.51□□□□□ -0.25
FDPS-215ENST00000490140 SQORQ9Y6N5 450 aa13.51□□□□□ -0.25
FDPS-215ENST00000490140 FSD2A1L4K1 749 aa13.5□□□□□ -0.25
FDPS-215ENST00000490140 PRC1O43663 620 aa13.5□□□□□ -0.25
FDPS-215ENST00000490140 STAG3L1P0CL83 205 aa13.5□□□□□ -0.25
FDPS-215ENST00000490140 PTH1RQ03431 593 aa13.5□□□□□ -0.25
FDPS-215ENST00000490140 NAALADL2Q58DX5 795 aa13.5□□□□□ -0.25
FDPS-215ENST00000490140 ADHFE1Q8IWW8 467 aa13.5□□□□□ -0.25
FDPS-215ENST00000490140 MAP4K1Q92918 833 aa13.5□□□□□ -0.25
FDPS-215ENST00000490140 CLP1Q92989 425 aaKnown RBP13.5□□□□□ -0.25
FDPS-215ENST00000490140 UIMC1Q96RL1 719 aa13.5□□□□□ -0.25
FDPS-215ENST00000490140 JPH1Q9HDC5 661 aaPredicted RBP13.5□□□□□ -0.25
FDPS-215ENST00000490140 C11orf16Q9NQ32 467 aa13.5□□□□□ -0.25
FDPS-215ENST00000490140 SLC12A7Q9Y666 1083 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms