RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 GPS2Q13227 327 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 TUBB2AQ13885 445 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 CTTNQ14247 550 aaKnown RBP17.34■□□□□ 0.37
BRD9-208ENST00000489816 MAEAQ7L5Y9 396 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 EHBP1Q8NDI1 1231 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 TUBB2BQ9BVA1 445 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 SNX12Q9UMY4 172 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 PCDHB13Q9Y5F0 798 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 A0A087X0T9 212 aa17.33■□□□□ 0.37
BRD9-208ENST00000489816 A0A1W2PRG0 241 aa17.33■□□□□ 0.37
BRD9-208ENST00000489816 FGFR1OPO95684 399 aaKnown RBP17.33■□□□□ 0.37
BRD9-208ENST00000489816 FAM228BP0C875 321 aa17.33■□□□□ 0.37
BRD9-208ENST00000489816 EHHADHQ08426 723 aa17.33■□□□□ 0.37
BRD9-208ENST00000489816 DNAJC21Q5F1R6 531 aaKnown RBP17.33■□□□□ 0.37
BRD9-208ENST00000489816 PDXDC1Q6P996 788 aa17.33■□□□□ 0.37
BRD9-208ENST00000489816 GJB7Q6PEY0 223 aa17.33■□□□□ 0.37
BRD9-208ENST00000489816 PRMT6Q96LA8 375 aaPredicted RBP17.33■□□□□ 0.37
BRD9-208ENST00000489816 REEP2Q9BRK0 252 aa17.33■□□□□ 0.37
BRD9-208ENST00000489816 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.33■□□□□ 0.372e-6■■■■■ 132.4
BRD9-208ENST00000489816 PI4KBQ9UBF8 816 aa17.33■□□□□ 0.37
BRD9-208ENST00000489816 APBA3O96018 575 aa17.33■□□□□ 0.36
BRD9-208ENST00000489816 NPR1P16066 1061 aa17.33■□□□□ 0.36
BRD9-208ENST00000489816 CASP4P49662 377 aa17.33■□□□□ 0.36
BRD9-208ENST00000489816 ABCB5Q2M3G0 1257 aa17.33■□□□□ 0.36
BRD9-208ENST00000489816 TBC1D10BQ4KMP7 808 aaPredicted RBP17.33■□□□□ 0.36
BRD9-208ENST00000489816 FOXR1Q6PIV2 292 aa17.33■□□□□ 0.36
BRD9-208ENST00000489816 OSBPL9Q96SU4 736 aa17.33■□□□□ 0.36
BRD9-208ENST00000489816 SH2D3AQ9BRG2 576 aa17.33■□□□□ 0.36
BRD9-208ENST00000489816 ATF5Q9Y2D1 282 aaPredicted RBP17.33■□□□□ 0.36
BRD9-208ENST00000489816 ECE2O60344 883 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 EIF3JO75822 258 aaKnown RBP17.32■□□□□ 0.36
BRD9-208ENST00000489816 KLRC1P26715 233 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 KCNH2Q12809 1159 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 HGSNATQ68CP4 663 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 TRIM58Q8NG06 486 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 CCDC66A2RUB6 948 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 hCG_1984214I3L0E3 225 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 NT5C2P49902 561 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 ZCWPW2Q504Y3 356 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 SFMBT2Q5VUG0 894 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 FBXO11Q86XK2 927 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 CDAN1Q8IWY9 1227 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 ZNF713Q8N859 430 aaPredicted RBP17.32■□□□□ 0.36
BRD9-208ENST00000489816 SPATA4Q8NEY3 305 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 FAM204AQ9H8W3 233 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 JRKLQ9Y4A0 524 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 A0A1W2PQJ5 194 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 EML1O00423 815 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 PPP1R2P41236 205 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 KIAA0753Q2KHM9 967 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 HHIPL2Q6UWX4 724 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 SND1Q7KZF4 910 aaKnown RBP eCLIP17.32■□□□□ 0.36
BRD9-208ENST00000489816 MIGA2Q7L4E1 593 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 TPH2Q8IWU9 490 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 ACER1Q8TDN7 264 aa17.32■□□□□ 0.36
BRD9-208ENST00000489816 DHX36Q9H2U1 1008 aaKnown RBP17.32■□□□□ 0.36
BRD9-208ENST00000489816 ALDH1B1P30837 517 aa17.31■□□□□ 0.36
BRD9-208ENST00000489816 ZSCAN26Q16670 478 aa17.31■□□□□ 0.36
BRD9-208ENST00000489816 FIGNQ5HY92 759 aa17.31■□□□□ 0.36
BRD9-208ENST00000489816 TTC19Q6DKK2 380 aaPredicted RBP17.31■□□□□ 0.36
BRD9-208ENST00000489816 RDH13Q8NBN7 331 aa17.31■□□□□ 0.36
BRD9-208ENST00000489816 CSRNP1Q96S65 589 aa17.31■□□□□ 0.36
BRD9-208ENST00000489816 NT5C3AQ9H0P0 336 aa17.31■□□□□ 0.36
BRD9-208ENST00000489816 DDX39AO00148 427 aaKnown RBP17.31■□□□□ 0.36
BRD9-208ENST00000489816 PALMO75781 387 aa17.31■□□□□ 0.36
BRD9-208ENST00000489816 GCNT3O95395 438 aa17.31■□□□□ 0.36
BRD9-208ENST00000489816 GGCXP38435 758 aa17.31■□□□□ 0.36
BRD9-208ENST00000489816 KLHL30Q0D2K2 578 aa17.31■□□□□ 0.36
BRD9-208ENST00000489816 SLC9C1Q4G0N8 1177 aa17.31■□□□□ 0.36
BRD9-208ENST00000489816 ZC2HC1CQ53FD0 456 aaPredicted RBP17.31■□□□□ 0.36
BRD9-208ENST00000489816 SELENOOQ9BVL4 669 aa17.31■□□□□ 0.36
BRD9-208ENST00000489816 RUSC1Q9BVN2 902 aa17.31■□□□□ 0.36
BRD9-208ENST00000489816 AMNQ9BXJ7 453 aa17.31■□□□□ 0.36
BRD9-208ENST00000489816 DNM3Q9UQ16 869 aa17.31■□□□□ 0.36
BRD9-208ENST00000489816 RNF40O75150 1001 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 MAPK8IP2Q13387 824 aaPredicted RBP17.3■□□□□ 0.36
BRD9-208ENST00000489816 NLGN1Q8N2Q7 840 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 TLR10Q9BXR5 811 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 GBP3Q9H0R5 595 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 KCNMB3Q9NPA1 279 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 RBM12Q9NTZ6 932 aaKnown RBP17.3■□□□□ 0.36
BRD9-208ENST00000489816 KLRG2A4D1S0 409 aaPredicted RBP17.3■□□□□ 0.36
BRD9-208ENST00000489816 SPATA31C1P0DKV0 1188 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 CKAP4Q07065 602 aaKnown RBP17.3■□□□□ 0.36
BRD9-208ENST00000489816 TRADDQ15628 312 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 KIAA1755Q5JYT7 1200 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 CCDC17Q96LX7 622 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 ALS2CR12Q96Q35 445 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 PCDHA2Q9Y5H9 948 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 SLC12A3P55017 1021 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 GIT2Q14161 759 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 SLC27A3Q5K4L6 730 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 IFT81Q8WYA0 676 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 ZDHHC15Q96MV8 337 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 PURBQ96QR8 312 aaKnown RBP17.3■□□□□ 0.36
BRD9-208ENST00000489816 SPAG5Q96R06 1193 aa17.3■□□□□ 0.36
BRD9-208ENST00000489816 PLIN4Q96Q06 1357 aa17.29■□□□□ 0.36
BRD9-208ENST00000489816 NHSQ6T4R5 1651 aa17.29■□□□□ 0.36
BRD9-208ENST00000489816 TMCO5BA8MYB1 307 aa17.29■□□□□ 0.36
BRD9-208ENST00000489816 CETN3O15182 167 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms