RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 ECM1Q16610 540 aa15.87■□□□□ 0.13
VPS26A-205ENST00000489656 MORN1Q5T089 497 aa15.87■□□□□ 0.13
VPS26A-205ENST00000489656 ZNF746Q6NUN9 644 aaPredicted RBP15.87■□□□□ 0.13
VPS26A-205ENST00000489656 KCNV1Q6PIU1 500 aa15.87■□□□□ 0.13
VPS26A-205ENST00000489656 MAMDC4Q6UXC1 1216 aa15.87■□□□□ 0.13
VPS26A-205ENST00000489656 GAS2L3Q86XJ1 694 aa15.87■□□□□ 0.13
VPS26A-205ENST00000489656 CATSPER3Q86XQ3 398 aa15.87■□□□□ 0.13
VPS26A-205ENST00000489656 LARP4BQ92615 738 aaKnown RBP15.87■□□□□ 0.13
VPS26A-205ENST00000489656 RAD54LQ92698 747 aa15.87■□□□□ 0.13
VPS26A-205ENST00000489656 MTRQ99707 1265 aa15.87■□□□□ 0.13
VPS26A-205ENST00000489656 EIF2AK1Q9BQI3 630 aaKnown RBP15.87■□□□□ 0.13
VPS26A-205ENST00000489656 CFHR5Q9BXR6 569 aa15.87■□□□□ 0.13
VPS26A-205ENST00000489656 POTEB3A0JP26 581 aa15.86■□□□□ 0.13
VPS26A-205ENST00000489656 SMC2O95347 1197 aa15.86■□□□□ 0.13
VPS26A-205ENST00000489656 CAVIN2O95810 425 aa15.86■□□□□ 0.13
VPS26A-205ENST00000489656 PRR29P0C7W0 189 aa15.86■□□□□ 0.13
VPS26A-205ENST00000489656 JAK3P52333 1124 aa15.86■□□□□ 0.13
VPS26A-205ENST00000489656 ZRSR1Q15695 479 aaKnown RBP15.86■□□□□ 0.13
VPS26A-205ENST00000489656 STX1AQ16623 288 aa15.86■□□□□ 0.13
VPS26A-205ENST00000489656 CNNM4Q6P4Q7 775 aa15.86■□□□□ 0.13
VPS26A-205ENST00000489656 POTEBQ6S5H4 581 aa15.86■□□□□ 0.13
VPS26A-205ENST00000489656 GRAMD1CQ8IYS0 662 aa15.86■□□□□ 0.13
VPS26A-205ENST00000489656 MSL3Q8N5Y2 521 aaKnown RBP15.86■□□□□ 0.13
VPS26A-205ENST00000489656 TRIML1Q8N9V2 468 aa15.86■□□□□ 0.13
VPS26A-205ENST00000489656 GIMAP8Q8ND71 665 aaPredicted RBP15.86■□□□□ 0.13
VPS26A-205ENST00000489656 SPDYE1Q8NFV5 336 aaPredicted RBP15.86■□□□□ 0.13
VPS26A-205ENST00000489656 SMARCE1Q969G3 411 aa15.86■□□□□ 0.13
VPS26A-205ENST00000489656 LRRC27Q9C0I9 530 aa15.86■□□□□ 0.13
VPS26A-205ENST00000489656 SLC5A4Q9NY91 659 aa15.86■□□□□ 0.13
VPS26A-205ENST00000489656 TCEAL9Q9UHQ7 104 aa15.86■□□□□ 0.13
VPS26A-205ENST00000489656 PCDHA5Q9Y5H7 936 aa15.86■□□□□ 0.13
VPS26A-205ENST00000489656 AOC2O75106 756 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 HOXC6P09630 235 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 MAP2K2P36507 400 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 AFMP43652 599 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 AMPD3Q01432 767 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 SV2BQ7L1I2 683 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 ARMCX2Q7L311 632 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 MIER3Q7Z3K6 550 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 KCNK18Q7Z418 384 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 SMAP1Q8IYB5 467 aaPredicted RBP15.85■□□□□ 0.13
VPS26A-205ENST00000489656 USP6NLQ92738 828 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 ERCC4Q92889 916 aaPredicted RBP15.85■□□□□ 0.13
VPS26A-205ENST00000489656 GSDMAQ96QA5 445 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 PLIN2Q99541 437 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 C7orf25Q9BPX7 421 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 ANO10Q9NW15 660 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 PKD2L1Q9P0L9 805 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 KIAA1024Q9UPX6 916 aa15.85■□□□□ 0.13
VPS26A-205ENST00000489656 WDR64B1ANS9 1081 aa15.84■□□□□ 0.13
VPS26A-205ENST00000489656 DDX39AO00148 427 aaKnown RBP15.84■□□□□ 0.13
VPS26A-205ENST00000489656 CHMP2AO43633 222 aa15.84■□□□□ 0.13
VPS26A-205ENST00000489656 SLITRK3O94933 977 aa15.84■□□□□ 0.13
VPS26A-205ENST00000489656 NLRP12P59046 1061 aa15.84■□□□□ 0.13
VPS26A-205ENST00000489656 MAP2K5Q13163 448 aa15.84■□□□□ 0.13
VPS26A-205ENST00000489656 GRM1Q13255 1194 aa15.84■□□□□ 0.13
VPS26A-205ENST00000489656 IRF5Q13568 498 aa15.84■□□□□ 0.13
VPS26A-205ENST00000489656 SEPT14Q6ZU15 432 aa15.84■□□□□ 0.13
VPS26A-205ENST00000489656 DPP9Q86TI2 863 aa15.84■□□□□ 0.13
VPS26A-205ENST00000489656 DYDC2Q96IM9 177 aa15.84■□□□□ 0.13
VPS26A-205ENST00000489656 MAML3Q96JK9 1138 aa15.84■□□□□ 0.13
VPS26A-205ENST00000489656 JPH1Q9HDC5 661 aaPredicted RBP15.84■□□□□ 0.13
VPS26A-205ENST00000489656 VTA1Q9NP79 307 aa15.84■□□□□ 0.13
VPS26A-205ENST00000489656 SYNGAP1Q96PV0 1343 aa15.84■□□□□ 0.13
VPS26A-205ENST00000489656 RBM47A0AV96 593 aaKnown RBP15.83■□□□□ 0.12
VPS26A-205ENST00000489656 POTEFA5A3E0 1075 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 GOLGA6L3A6NEY3 463 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 LYPLA2O95372 231 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 CCNE2O96020 404 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 P4HBP07237 508 aaKnown RBP15.83■□□□□ 0.12
VPS26A-205ENST00000489656 UBA1P22314 1058 aaKnown RBP15.83■□□□□ 0.12
VPS26A-205ENST00000489656 SP2Q02086 613 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 CUL4BQ13620 913 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 MORC3Q14149 939 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 NEDD9Q14511 834 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 MCM6Q14566 821 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 POTEGQ6S5H5 508 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 SOCS4Q8WXH5 440 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 TRIM9Q9C026 710 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 KATNBL1Q9H079 304 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 RGL1Q9NZL6 768 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 SLC9A2Q9UBY0 812 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 MAN1B1Q9UKM7 699 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 DNM3Q9UQ16 869 aa15.83■□□□□ 0.12
VPS26A-205ENST00000489656 E9PMD0 336 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 ATG7O95352 703 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 EYA4O95677 639 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 PLA2G4BP0C869 781 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 SLC12A3P55017 1021 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 CYP4A11Q02928 519 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 KCNB1Q14721 858 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 ANO6Q4KMQ2 910 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 CCDC62Q6P9F0 684 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 SCFD2Q8WU76 684 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 STAMQ92783 540 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 NACC1Q96RE7 527 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 LXNQ9BS40 222 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 ZSWIM4Q9H7M6 989 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 RMND1Q9NWS8 449 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 DDX41Q9UJV9 622 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms