RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 USP17L6PQ6QN14 398 aa13.72□□□□□ -0.21
SFXN3-207ENST00000489434 TMEM192Q8IY95 271 aa13.72□□□□□ -0.21
SFXN3-207ENST00000489434 ZNF654Q8IZM8 581 aa13.72□□□□□ -0.21
SFXN3-207ENST00000489434 BANK1Q8NDB2 785 aa13.72□□□□□ -0.21
SFXN3-207ENST00000489434 IGDCC4Q8TDY8 1250 aa13.72□□□□□ -0.21
SFXN3-207ENST00000489434 IL17RAQ96F46 866 aa13.72□□□□□ -0.21
SFXN3-207ENST00000489434 MTA3Q9BTC8 594 aa13.72□□□□□ -0.21
SFXN3-207ENST00000489434 PIEZO1Q92508 2521 aa13.72□□□□□ -0.21
SFXN3-207ENST00000489434 MYO7AQ13402 2215 aa13.72□□□□□ -0.21
SFXN3-207ENST00000489434 CCDC69A6NI79 296 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 SGSM2O43147 1006 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 RPLP2P05387 115 aaKnown RBP13.71□□□□□ -0.21
SFXN3-207ENST00000489434 CALM1P0DP23 149 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 CALM2P0DP24 149 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 CALM3P0DP25 149 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 PDE4AP27815 886 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 MCM5P33992 734 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 TCF7P36402 384 aaPredicted RBP13.71□□□□□ -0.21
SFXN3-207ENST00000489434 PPFIA1Q13136 1202 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 SEMA3FQ13275 785 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 FAM26DQ5JW98 314 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 FAM178BQ8IXR5 827 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 MB21D2Q8IYB1 491 aaPredicted RBP13.71□□□□□ -0.21
SFXN3-207ENST00000489434 GJD3Q8N144 294 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 FIBCD1Q8N539 461 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 GLG1Q92896 1179 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 GPRASP2Q96D09 838 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 PSTPIP2Q9H939 334 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 ERAP1Q9NZ08 941 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 RWDD3Q9Y3V2 267 aa13.71□□□□□ -0.21
SFXN3-207ENST00000489434 MUC6Q6W4X9 2439 aa13.71□□□□□ -0.22
SFXN3-207ENST00000489434 SPDYE3A6NKU9 549 aa13.7□□□□□ -0.22
SFXN3-207ENST00000489434 NCK2O43639 380 aa13.7□□□□□ -0.22
SFXN3-207ENST00000489434 GPR37L1O60883 481 aa13.7□□□□□ -0.22
SFXN3-207ENST00000489434 ANTXR2P58335 489 aa13.7□□□□□ -0.22
SFXN3-207ENST00000489434 ADAM17P78536 824 aa13.7□□□□□ -0.22
SFXN3-207ENST00000489434 EP400NLQ6ZTU2 488 aa13.7□□□□□ -0.22
SFXN3-207ENST00000489434 RPAINQ86UA6 219 aa13.7□□□□□ -0.22
SFXN3-207ENST00000489434 SEPT1Q8WYJ6 367 aa13.7□□□□□ -0.22
SFXN3-207ENST00000489434 MAP4K1Q92918 833 aa13.7□□□□□ -0.22
SFXN3-207ENST00000489434 TNPO1Q92973 898 aaKnown RBP13.7□□□□□ -0.22
SFXN3-207ENST00000489434 C11orf84Q9BUA3 381 aaPredicted RBP13.7□□□□□ -0.22
SFXN3-207ENST00000489434 NSUN3Q9H649 340 aaKnown RBP13.7□□□□□ -0.22
SFXN3-207ENST00000489434 EHMT1Q9H9B1 1298 aa13.7□□□□□ -0.22
SFXN3-207ENST00000489434 LY9Q9HBG7 655 aa13.7□□□□□ -0.22
SFXN3-207ENST00000489434 TAF6LQ9Y6J9 622 aa13.7□□□□□ -0.22
SFXN3-207ENST00000489434 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
SFXN3-207ENST00000489434 COL4A6Q14031 1691 aa13.69□□□□□ -0.22
SFXN3-207ENST00000489434 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.69□□□□□ -0.22
SFXN3-207ENST00000489434 GRXCR2A6NFK2 248 aa13.69□□□□□ -0.22
SFXN3-207ENST00000489434 PI4K2BG5E9Z4 385 aa13.69□□□□□ -0.22
SFXN3-207ENST00000489434 MEIS2O14770 477 aa13.69□□□□□ -0.22
SFXN3-207ENST00000489434 PRC1O43663 620 aa13.69□□□□□ -0.22
SFXN3-207ENST00000489434 CHRNA1P02708 482 aa13.69□□□□□ -0.22
SFXN3-207ENST00000489434 RB1P06400 928 aa13.69□□□□□ -0.22
SFXN3-207ENST00000489434 ALADP13716 330 aa13.69□□□□□ -0.22
SFXN3-207ENST00000489434 CTNNB1P35222 781 aa13.69□□□□□ -0.22
SFXN3-207ENST00000489434 MTMR1Q13613 665 aa13.69□□□□□ -0.22
SFXN3-207ENST00000489434 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.69□□□□□ -0.22
SFXN3-207ENST00000489434 PABPC5Q96DU9 382 aaKnown RBP13.69□□□□□ -0.22
SFXN3-207ENST00000489434 TMEM87BQ96K49 555 aa13.69□□□□□ -0.22
SFXN3-207ENST00000489434 MYL10Q9BUA6 226 aa13.69□□□□□ -0.22
SFXN3-207ENST00000489434 SMARCAD1Q9H4L7 1026 aa13.69□□□□□ -0.22
SFXN3-207ENST00000489434 TUBE1Q9UJT0 475 aa13.69□□□□□ -0.22
SFXN3-207ENST00000489434 RBM8AQ9Y5S9 174 aaKnown RBP13.69□□□□□ -0.22
SFXN3-207ENST00000489434 RALGAPA2Q2PPJ7 1873 aa13.69□□□□□ -0.22
SFXN3-207ENST00000489434 H3BQ06 376 aaPredicted RBP13.68□□□□□ -0.22
SFXN3-207ENST00000489434 MAFGO15525 162 aa13.68□□□□□ -0.22
SFXN3-207ENST00000489434 GHRP10912 638 aa13.68□□□□□ -0.22
SFXN3-207ENST00000489434 GRIK4Q16099 956 aa13.68□□□□□ -0.22
SFXN3-207ENST00000489434 TCEAL5Q5H9L2 206 aa13.68□□□□□ -0.22
SFXN3-207ENST00000489434 NEK9Q8TD19 979 aa13.68□□□□□ -0.22
SFXN3-207ENST00000489434 LMAN2LQ9H0V9 348 aa13.68□□□□□ -0.22
SFXN3-207ENST00000489434 CD320Q9NPF0 282 aa13.68□□□□□ -0.22
SFXN3-207ENST00000489434 SLC12A7Q9Y666 1083 aa13.68□□□□□ -0.22
SFXN3-207ENST00000489434 FAM86C2PA6NEL3 165 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 RRN3P2A6NIE6 340 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 M0QZ92 97 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 PLEKHA8P1O95397 391 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 IL9P15248 144 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 KCNA2P16389 499 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 MARK3P27448 753 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 LIFRP42702 1097 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 LPIN1Q14693 890 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 CSPP1Q1MSJ5 1256 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 IER5Q5VY09 327 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 SYNE3Q6ZMZ3 975 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 RUFY4Q6ZNE9 571 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 SRBD1Q8N5C6 995 aaKnown RBP13.67□□□□□ -0.22
SFXN3-207ENST00000489434 OSBPL7Q9BZF2 842 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 AZI2Q9H6S1 392 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 CLDND1Q9NY35 253 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 PRKAG3Q9UGI9 489 aa13.67□□□□□ -0.22
SFXN3-207ENST00000489434 ADGRA3Q8IWK6 1321 aa13.66□□□□□ -0.22
SFXN3-207ENST00000489434 TTC3P53804 2025 aa13.66□□□□□ -0.22
SFXN3-207ENST00000489434 GSTTP1A0A1W2PQM5 241 aa13.66□□□□□ -0.22
SFXN3-207ENST00000489434 MBLAC1A4D2B0 266 aaPredicted RBP13.66□□□□□ -0.22
SFXN3-207ENST00000489434 C5orf67F2Z3F1 127 aa13.66□□□□□ -0.22
SFXN3-207ENST00000489434 SH2B2O14492 632 aaPredicted RBP13.66□□□□□ -0.22
SFXN3-207ENST00000489434 ATP9AO75110 1047 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms