RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 FSD2A1L4K1 749 aa23.37■■□□□ 1.33
SND1-214ENST00000489417 MYL1P05976 194 aa23.37■■□□□ 1.33
SND1-214ENST00000489417 MUTP22033 750 aa23.37■■□□□ 1.33
SND1-214ENST00000489417 CASP1P29466 404 aa23.37■■□□□ 1.33
SND1-214ENST00000489417 SFNP31947 248 aa23.37■■□□□ 1.33
SND1-214ENST00000489417 SARSP49591 514 aaKnown RBP23.37■■□□□ 1.33
SND1-214ENST00000489417 JAK3P52333 1124 aa23.37■■□□□ 1.33
SND1-214ENST00000489417 AMPD3Q01432 767 aa23.37■■□□□ 1.33
SND1-214ENST00000489417 NT5DC1Q5TFE4 455 aa23.37■■□□□ 1.33
SND1-214ENST00000489417 KCTD17Q8N5Z5 321 aa23.37■■□□□ 1.33
SND1-214ENST00000489417 RDM1Q8NG50 284 aa23.37■■□□□ 1.33
SND1-214ENST00000489417 SPATA20Q8TB22 786 aa23.37■■□□□ 1.33
SND1-214ENST00000489417 SENP7Q9BQF6 1050 aa23.37■■□□□ 1.33
SND1-214ENST00000489417 BLZF1Q9H2G9 400 aa23.37■■□□□ 1.33
SND1-214ENST00000489417 ANO10Q9NW15 660 aa23.37■■□□□ 1.33
SND1-214ENST00000489417 KIAA1217Q5T5P2 1943 aa23.37■■□□□ 1.33
SND1-214ENST00000489417 WDR64B1ANS9 1081 aa23.36■■□□□ 1.33
SND1-214ENST00000489417 E9PMD0 336 aa23.36■■□□□ 1.33
SND1-214ENST00000489417 BIN1O00499 593 aa23.36■■□□□ 1.33
SND1-214ENST00000489417 ECM2O94769 699 aaPredicted RBP23.36■■□□□ 1.33
SND1-214ENST00000489417 SLITRK3O94933 977 aa23.36■■□□□ 1.33
SND1-214ENST00000489417 CCNE2O96020 404 aa23.36■■□□□ 1.33
SND1-214ENST00000489417 TGFB3P10600 412 aa23.36■■□□□ 1.33
SND1-214ENST00000489417 NLRP12P59046 1061 aa23.36■■□□□ 1.33
SND1-214ENST00000489417 SP2Q02086 613 aa23.36■■□□□ 1.33
SND1-214ENST00000489417 MAP2K5Q13163 448 aa23.36■■□□□ 1.33
SND1-214ENST00000489417 CUL4BQ13620 913 aa23.36■■□□□ 1.33
SND1-214ENST00000489417 CTTNQ14247 550 aaKnown RBP23.36■■□□□ 1.33
SND1-214ENST00000489417 KCNV1Q6PIU1 500 aa23.36■■□□□ 1.33
SND1-214ENST00000489417 FBXO16Q8IX29 292 aaPredicted RBP23.36■■□□□ 1.33
SND1-214ENST00000489417 MAML3Q96JK9 1138 aa23.36■■□□□ 1.33
SND1-214ENST00000489417 JPH1Q9HDC5 661 aaPredicted RBP23.36■■□□□ 1.33
SND1-214ENST00000489417 SLC9A2Q9UBY0 812 aa23.36■■□□□ 1.33
SND1-214ENST00000489417 MAN1B1Q9UKM7 699 aa23.36■■□□□ 1.33
SND1-214ENST00000489417 SAMM50Q9Y512 469 aa23.36■■□□□ 1.33
SND1-214ENST00000489417 A0A087WWV3 80 aa23.35■■□□□ 1.33
SND1-214ENST00000489417 UBA1P22314 1058 aaKnown RBP23.35■■□□□ 1.33
SND1-214ENST00000489417 DHX8Q14562 1220 aaKnown RBP23.35■■□□□ 1.33
SND1-214ENST00000489417 ANO6Q4KMQ2 910 aa23.35■■□□□ 1.33
SND1-214ENST00000489417 MAMDC4Q6UXC1 1216 aa23.35■■□□□ 1.33
SND1-214ENST00000489417 TPH2Q8IWU9 490 aa23.35■■□□□ 1.33
SND1-214ENST00000489417 GIMAP8Q8ND71 665 aaPredicted RBP23.35■■□□□ 1.33
SND1-214ENST00000489417 NPLOC4Q8TAT6 608 aa23.35■■□□□ 1.33
SND1-214ENST00000489417 C7orf25Q9BPX7 421 aa23.35■■□□□ 1.33
SND1-214ENST00000489417 LRRC27Q9C0I9 530 aa23.35■■□□□ 1.33
SND1-214ENST00000489417 DNM3Q9UQ16 869 aa23.35■■□□□ 1.33
SND1-214ENST00000489417 P4HBP07237 508 aaKnown RBP23.34■■□□□ 1.33
SND1-214ENST00000489417 MAP2K2P36507 400 aa23.34■■□□□ 1.33
SND1-214ENST00000489417 VEGFBP49765 207 aa23.34■■□□□ 1.33
SND1-214ENST00000489417 SMAP1Q8IYB5 467 aaPredicted RBP23.34■■□□□ 1.33
SND1-214ENST00000489417 TRIML1Q8N9V2 468 aa23.34■■□□□ 1.33
SND1-214ENST00000489417 GSDMAQ96QA5 445 aa23.34■■□□□ 1.33
SND1-214ENST00000489417 LXNQ9BS40 222 aa23.34■■□□□ 1.33
SND1-214ENST00000489417 RBSNQ9H1K0 784 aa23.34■■□□□ 1.33
SND1-214ENST00000489417 BCAS3Q9H6U6 928 aa23.34■■□□□ 1.33
SND1-214ENST00000489417 VTA1Q9NP79 307 aa23.34■■□□□ 1.33
SND1-214ENST00000489417 TNPO2O14787 897 aaKnown RBP23.33■■□□□ 1.33
SND1-214ENST00000489417 PLA2G4BP0C869 781 aa23.33■■□□□ 1.33
SND1-214ENST00000489417 NEDD9Q14511 834 aa23.33■■□□□ 1.33
SND1-214ENST00000489417 BANK1Q8NDB2 785 aa23.33■■□□□ 1.33
SND1-214ENST00000489417 SOCS4Q8WXH5 440 aa23.33■■□□□ 1.33
SND1-214ENST00000489417 USP6NLQ92738 828 aa23.33■■□□□ 1.33
SND1-214ENST00000489417 TRIM9Q9C026 710 aa23.33■■□□□ 1.33
SND1-214ENST00000489417 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.33■■□□□ 1.33
SND1-214ENST00000489417 EYA4O95677 639 aa23.33■■□□□ 1.32
SND1-214ENST00000489417 RPN1P04843 607 aaKnown RBP23.33■■□□□ 1.32
SND1-214ENST00000489417 SSBP05455 408 aaKnown RBP eCLIP23.33■■□□□ 1.32
SND1-214ENST00000489417 HOXC6P09630 235 aa23.33■■□□□ 1.32
SND1-214ENST00000489417 PSMC6P62333 389 aa23.33■■□□□ 1.32
SND1-214ENST00000489417 MORC3Q14149 939 aa23.33■■□□□ 1.32
SND1-214ENST00000489417 ISM2Q6H9L7 571 aa23.33■■□□□ 1.32
SND1-214ENST00000489417 CYFIP1Q7L576 1253 aa23.33■■□□□ 1.32
SND1-214ENST00000489417 MSL3Q8N5Y2 521 aaKnown RBP23.33■■□□□ 1.32
SND1-214ENST00000489417 DNAJC25Q9H1X3 360 aa23.33■■□□□ 1.32
SND1-214ENST00000489417 ZSWIM4Q9H7M6 989 aa23.33■■□□□ 1.32
SND1-214ENST00000489417 DDX41Q9UJV9 622 aaKnown RBP23.33■■□□□ 1.32
SND1-214ENST00000489417 PCDHA10Q9Y5I2 948 aa23.33■■□□□ 1.32
SND1-214ENST00000489417 SYNGAP1Q96PV0 1343 aa23.32■■□□□ 1.32
SND1-214ENST00000489417 MYMKA6NI61 221 aa23.32■■□□□ 1.32
SND1-214ENST00000489417 SORBS3O60504 671 aa23.32■■□□□ 1.32
SND1-214ENST00000489417 ARIH2O95376 493 aa23.32■■□□□ 1.32
SND1-214ENST00000489417 RGS2P41220 211 aa23.32■■□□□ 1.32
SND1-214ENST00000489417 QARSP47897 775 aaKnown RBP23.32■■□□□ 1.32
SND1-214ENST00000489417 FCGRTP55899 365 aa23.32■■□□□ 1.32
SND1-214ENST00000489417 ACTR2P61160 394 aa23.32■■□□□ 1.32
SND1-214ENST00000489417 HTRA3P83110 453 aa23.32■■□□□ 1.32
SND1-214ENST00000489417 DPCR1Q3MIW9 517 aa23.32■■□□□ 1.32
SND1-214ENST00000489417 SCFD2Q8WU76 684 aa23.32■■□□□ 1.32
SND1-214ENST00000489417 NACC1Q96RE7 527 aa23.32■■□□□ 1.32
SND1-214ENST00000489417 TINF2Q9BSI4 451 aa23.32■■□□□ 1.32
SND1-214ENST00000489417 CFHR5Q9BXR6 569 aa23.32■■□□□ 1.32
SND1-214ENST00000489417 RMND1Q9NWS8 449 aa23.32■■□□□ 1.32
SND1-214ENST00000489417 WRAP73Q9P2S5 460 aaPredicted RBP23.32■■□□□ 1.32
SND1-214ENST00000489417 GGPS1O95749 300 aa23.31■■□□□ 1.32
SND1-214ENST00000489417 CAVIN2O95810 425 aa23.31■■□□□ 1.32
SND1-214ENST00000489417 SNAI1O95863 264 aaPredicted RBP23.31■■□□□ 1.32
SND1-214ENST00000489417 PSAPP07602 524 aa23.31■■□□□ 1.32
SND1-214ENST00000489417 SLC12A3P55017 1021 aa23.31■■□□□ 1.32
SND1-214ENST00000489417 ASIC1P78348 528 aa23.31■■□□□ 1.32
SND1-214ENST00000489417 SP4Q02446 784 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms